Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p13890 Brassica napus
Aa31LG2G3460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2273 Anthoceros agrestis
Actinidia15887 Actinidia chinensis
Ah.02g114990 Amaranthus hybridus
Ah.16g101720 Amaranthus hybridus
AL2G25410 Arabidopsis lyrata
Aqoxy3G00261 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8L3LRB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJ6Y7L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FNQ425 Arachis hypogaea
AT1G67060 Arabidopsis thaliana
ATR1125G011 Amborella trichopoda
Atru.chr1.1671 Acer truncatum
Atru.chr9.863 Acer truncatum
AUR62009006 Chenopodium quinoa
AUR62025824 Chenopodium quinoa
AUR62029882 Chenopodium quinoa
AUR62044276 Chenopodium quinoa
BcaB05g24233 Brassica carinata
BcaC03g14792 Brassica carinata
BolC2t08393H Brassica oleracea
BraA02t06450Z Brassica rapa
C02p22390 Brassica napus
CAN.G276.13 Capsicum annuum
CAN.G625.28 Capsicum annuum
CAN.G82.4 Capsicum annuum
CANSAT78G0992 Cannabis sativa
CARHR059480 Cardamine hirsuta
Carub.0002s1335 Capsella rubella
Ca_08074_v3 Cicer arietinum L.
CBR_g54168 Chara braunii
Cc00_g11610 Coffea canephora
Cc07_g08760 Coffea canephora
CDE06G0743 Ceratophyllum demersum
CDE08G0160 Ceratophyllum demersum
CDE12G0109 Ceratophyllum demersum
Ciclev10012627m.g Citrus clementina
Ciclev10023924m.g Citrus clementina
Ciclev10024177m.g Citrus clementina
CiPaw.03G062200 Carya illinoinensis
CiPaw.16G087700 Carya illinoinensis
ClCG06G014710 Citrullus lanatus
ClCG11G007870 Citrullus lanatus
COL.COLO4_04899 Corchorus olitorius
COL.COLO4_09344 Corchorus olitorius
Cpa.g.c35056 Carica papaya
Cpa.g.sc282.1 Carica papaya
CsaV3_1G003940 Cucumis sativus L.
CsaV3_2G033720 Cucumis sativus L.
CSS0000453 Camellia sinensis var. sinensis
DCAR_015145 Daucus carota
DCAR_021447 Daucus carota
Dinv15690 Davidia involucrata
Dinv33951 Davidia involucrata
Dinv34818 Davidia involucrata
Duzib133G1273 Durio zibethinus
Duzib138G0832 Durio zibethinus
Duzib205G2069 Durio zibethinus
ECA238G2424 Erigeron canadensis
ECA238G4561 Erigeron canadensis
ECA246G5082 Erigeron canadensis
EL10Ac2g04559 Beta vulgaris
EL10Ac5g11462 Beta vulgaris
Eucgr.B00733 Eucalyptus grandis
Eucgr.F02502 Eucalyptus grandis
FAN01G0506 Fragaria x ananassa
FAN03G1656 Fragaria x ananassa
FAN04G2107 Fragaria x ananassa
FAN06G0873 Fragaria x ananassa
FAN06G2942 Fragaria x ananassa
FAN08G2993 Fragaria x ananassa
FAN13G1862 Fragaria x ananassa
FAN18G4034 Fragaria x ananassa
FAN18G4239 Fragaria x ananassa
FvH4_3g34180 Fragaria vesca
FvH4_5g11891 Fragaria vesca
FvH4_5g11892 Fragaria vesca
FvH4_7g13690 Fragaria vesca
Glyma.05G237900 Glycine max
Glyma.08G366100 Glycine max
Glyma.18G296200 Glycine max
Gohir.A08G053100 Gossypium hirsutum
Gohir.A09G048600 Gossypium hirsutum
Gohir.D08G062700 Gossypium hirsutum
Gohir.D09G049700 Gossypium hirsutum
Gohir.D12G075701 Gossypium hirsutum
Gorai.004G064900 Gossypium raimondii
Gorai.004G256200 Gossypium raimondii
Gorai.006G060100 Gossypium raimondii
Gorai.011G107100 Gossypium raimondii
Gorai.011G107700 Gossypium raimondii
Gorai.013G078100 Gossypium raimondii
GSVIVG01008308001 Vitis vinifera
GSVIVG01031014001 Vitis vinifera
HanXRQChr06g0184701 Helianthus annuus
HanXRQChr12g0375801 Helianthus annuus
Haze_14162 Corylus avellana
Haze_18694 Corylus avellana
Haze_18697 Corylus avellana
Hma1.2p1_0165F.1_g073420 Hydrangea macrophylla
Hma1.2p1_1109F.1_g258080 Hydrangea macrophylla
HPP92_019813 Vanilla planifolia
Hund02384 Selenicereus undatus
Hund16160 Selenicereus undatus
Lalb_Chr05g0222431 Lupinus albus
Lalb_Chr10g0091281 Lupinus albus
Lj1g0004565 Lotus japonicus
Lj2A441T50 Lonicera japonica
Lj4A191T46 Lonicera japonica
Lj5A150T49 Lonicera japonica
Lsat_1_v5_gn_2_12241 Lactuca sativa
Lsat_1_v5_gn_3_79640 Lactuca sativa
Lsat_1_v5_gn_3_79660 Lactuca sativa
Manes.01G110900 Manihot esculenta
Manes.02G069400 Manihot esculenta
Manes.05G114500 Manihot esculenta
Mapoly0461s0001 Marchantia polymorpha
MBI16_g05558_MAGBIO Magnolia biondii
MBI16_g23457_MAGBIO Magnolia biondii
MD06G1217400 Malus domestica
MD06G1217500 Malus domestica
MD09G1253200 Malus domestica
MD14G1227700 Malus domestica
MD17G1245200 Malus domestica
Medtr7g082140 Medicago truncatula
MELO3C008142.2 Cucumis melo
MELO3C017317.2 Cucumis melo
Migut.H00222 Erythranthe guttata
Migut.L00325 Erythranthe guttata
MSTRG.15299 Avicennia marina
MSTRG.23578 Avicennia marina
MSTRG.3567 Avicennia marina
Nitab4.5_0001382g0030 Nicotiana tabacum
Nitab4.5_0002207g0030 Nicotiana tabacum
Nitab4.5_0002906g0150 Nicotiana tabacum
Nitab4.5_0004416g0020 Nicotiana tabacum
Nitab4.5_0009087g0030 Nicotiana tabacum
Nn3g17887 Nelumbo nucifera
Nn4g23892 Nelumbo nucifera
Oeu016623.2 Olea europaea
Oeu050375.1 Olea europaea
Os02g0221600 Oryza sativa ssp. japonica
Peaxi162Scf00015g01043 Petunia axillaris
Peaxi162Scf00104g01110 Petunia axillaris
Peaxi162Scf00394g00718 Petunia axillaris
PGR004G0568 Punica granatum
PGR083G2458 Punica granatum
PGSC0003DMG400024377 Solanum tuberosum
PGSC0003DMG400026391 Solanum tuberosum
PGSC0003DMG401005726 Solanum tuberosum
PGSC0003DMG403019589 Solanum tuberosum
Phvul.008G006400 Phaseolus vulgaris
Potri.004G098800 Populus trichocarpa
Potri.015G045900 Populus trichocarpa
Pp3c23_12480 Physcomitrium patens
Prupe.3G143000 Prunus persica
Prupe.5G222600 Prunus persica
Prupe.5G222700 Prunus persica
Psat3g098560 Pisum sativum
PSO063G5893 Papaver somniferum
PSO782G3507 Papaver somniferum
QL02p051116 Quercus lobata
QL10p025608 Quercus lobata
RcHm_v2.0_Chr2g0126081 Rosa chinensis
RcHm_v2.0_Chr7g0185671 Rosa chinensis
RcHm_v2.0_Chr7g0185681 Rosa chinensis
Rhsim10G0068000 Rhododendron simsii
Sabra04G0081000 Salix brachista
Sabra15G0039600 Salix brachista
SalBow3G2560 Salvia bowleyana
SalBow5G0703 Salvia bowleyana
Sc10g0001110 Simmondsia chinensis
Sc10g0009440 Simmondsia chinensis
Sed0004624 Sechium edule
Sed0022160 Sechium edule
SEGI_20114 Sequoiadendron giganteum
SEGI_25386 Sequoiadendron giganteum
SGA_v2.0_scaffold278G46750 Striga asiatica
SMO174G0159 Selaginella moellendorffii
Solyc02g086110.3 Solanum lycopersicum
Solyc03g034250.4 Solanum lycopersicum
Solyc03g119350.3 Solanum lycopersicum
Sopen02g030800 Solanum pennellii
Sopen03g007030 Solanum pennellii
Sopen03g038220 Solanum pennellii
Sp5g21990 Schrenkiella parvula
TAR622G1191 Trochodendron aralioides
TAR629G0768 Trochodendron aralioides
THA.LOC104805570 Tarenaya hassleriana
THA.LOC104823859 Tarenaya hassleriana
Thecc.03G037100 Theobroma cacao
Thecc.04G132800 Theobroma cacao
Thhalv10019077m.g Eutrema salsugineum
TPR.G29085 Trifolium pratense
TPR.G32698 Trifolium pratense
TWI53G0997 Tripterygium wilfordii
TWI74G1558 Tripterygium wilfordii
unitig_32.g10652 Utricularia gibba
unitig_32.g10653 Utricularia gibba
vmacro05549 Vaccinium macrocarpon
VMungo0251G3612 Vigna mungo
VMungo1383G2772 Vigna mungo
Zm00001eb012780 Zea mays
Zm00001eb397400 Zea mays

User provided reference genes

Program Settings