Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p12780 Brassica napus
A06p00780 Brassica napus
A08p31000 Brassica napus
Aa31LG10G1520 Aethionema arabicum
Aa31LG7G2080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.223 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.224 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.235 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.245 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.534 Anthoceros agrestis
Actinidia21844 Actinidia chinensis
Actinidia24417 Actinidia chinensis
Actinidia25998 Actinidia chinensis
Ah.08g217420 Amaranthus hybridus
AL1G29520 Arabidopsis lyrata
AL1G62460 Arabidopsis lyrata
AL8G24652 Arabidopsis lyrata
Aqoxy7G00922 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.228WZM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.42RYK8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K9Y76V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N9CMJR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UC07MD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YFI140 Arachis hypogaea
AT1G17270 Arabidopsis thaliana
AT1G53770 Arabidopsis thaliana
AT5G50420 Arabidopsis thaliana
ATR0053G062 Amborella trichopoda
Atru.chr1.4146 Acer truncatum
Atru.chr1.4171 Acer truncatum
Atru.chr5.771 Acer truncatum
AUR62001394 Chenopodium quinoa
AUR62025609 Chenopodium quinoa
BcaB03g13009 Brassica carinata
BcaB05g24050 Brassica carinata
BcaB05g24051 Brassica carinata
BcaB07g33302 Brassica carinata
BcaC03g14650 Brassica carinata
BcaC07g38841 Brassica carinata
BcaC07g38842 Brassica carinata
BcaC07g38843 Brassica carinata
BcaC08g43556 Brassica carinata
BolC2t08224H Brassica oleracea
BolC6t36029H Brassica oleracea
BolC8t49406H Brassica oleracea
BraA02t06335Z Brassica rapa
BraA06t23312Z Brassica rapa
BraA08t35029Z Brassica rapa
C02p20840 Brassica napus
C06p09550 Brassica napus
C08p17800 Brassica napus
C09p42550 Brassica napus
CAN.G1633.1 Capsicum annuum
CAN.G790.51 Capsicum annuum
CAN.G804.5 Capsicum annuum
CANSAT56G3228 Cannabis sativa
CARHR017860 Cardamine hirsuta
CARHR044080 Cardamine hirsuta
CARHR257910 Cardamine hirsuta
CARHR257920 Cardamine hirsuta
Carub.0001s1703 Capsella rubella
Carub.0001s4304 Capsella rubella
Carub.0008s1053 Capsella rubella
Ca_23465_v3 Cicer arietinum L.
CBR_g20015 Chara braunii
CBR_g243 Chara braunii
CBR_g34942 Chara braunii
CBR_g38464 Chara braunii
CBR_g72643 Chara braunii
Cc04_g00620 Coffea canephora
CDE07G0121 Ceratophyllum demersum
Cfa003454 Carpinus fangiana
Cfa006796 Carpinus fangiana
Ciclev10025289m.g Citrus clementina
CiPaw.01G210700 Carya illinoinensis
CiPaw.02G130300 Carya illinoinensis
ClCG07G014230 Citrullus lanatus
ClCG11G011670 Citrullus lanatus
COL.COLO4_30879 Corchorus olitorius
Cpa.g.sc25.202 Carica papaya
CsaV3_2G008800 Cucumis sativus L.
CsaV3_3G031120 Cucumis sativus L.
CSS0017118 Camellia sinensis var. sinensis
DCAR_022637 Daucus carota
Dinv20375 Davidia involucrata
Dinv37815 Davidia involucrata
Duzib192G1026 Durio zibethinus
Duzib235G1024 Durio zibethinus
ECA232G0298 Erigeron canadensis
EL10Ac7g18249 Beta vulgaris
Eucgr.I02168 Eucalyptus grandis
Eucgr.J02587 Eucalyptus grandis
FAN02G2685 Fragaria x ananassa
FAN05G2402 Fragaria x ananassa
FAN09G0286 Fragaria x ananassa
FAN14G3383 Fragaria x ananassa
FAN14G4277 Fragaria x ananassa
FvH4_6g36080 Fragaria vesca
Glyma.07G046500 Glycine max
Glyma.16G014800 Glycine max
Gohir.A06G142600 Gossypium hirsutum
Gohir.A09G076000 Gossypium hirsutum
Gohir.A10G050100 Gossypium hirsutum
Gohir.D06G148300 Gossypium hirsutum
Gohir.D09G075700 Gossypium hirsutum
Gohir.D10G050700 Gossypium hirsutum
Gorai.006G090800 Gossypium raimondii
Gorai.010G172800 Gossypium raimondii
Gorai.011G054400 Gossypium raimondii
GSVIVG01016658001 Vitis vinifera
HanXRQChr09g0277291 Helianthus annuus
Haze_16144 Corylus avellana
Haze_16148 Corylus avellana
Hma1.2p1_0090F.1_g045700 Hydrangea macrophylla
Hma1.2p1_1999F.1_g310510 Hydrangea macrophylla
HPP92_012515 Vanilla planifolia
HPP92_014233 Vanilla planifolia
HPP92_026494 Vanilla planifolia
Hund18628 Selenicereus undatus
Lalb_Chr04g0253981 Lupinus albus
Lalb_Chr10g0101071 Lupinus albus
Lalb_Chr15g0076651 Lupinus albus
Lj1g0009105 Lotus japonicus
Lj5A28T48 Lonicera japonica
Lj6g0020924 Lotus japonicus
Lj9A539T87 Lonicera japonica
Lsat_1_v5_gn_4_89601 Lactuca sativa
Manes.11G011700 Manihot esculenta
MBI06_g05962_MAGBIO Magnolia biondii
MBI19_g32878_MAGBIO Magnolia biondii
MD09G1171900 Malus domestica
MD17G1155100 Malus domestica
Medtr8g023490 Medicago truncatula
MELO3C003961.2 Cucumis melo
MELO3C026659.2 Cucumis melo
Migut.I01142 Erythranthe guttata
MSTRG.22513 Avicennia marina
MSTRG.26363 Avicennia marina
Nitab4.5_0006190g0010 Nicotiana tabacum
Nitab4.5_0006338g0030 Nicotiana tabacum
Nitab4.5_0006966g0020 Nicotiana tabacum
Nitab4.5_0010570g0030 Nicotiana tabacum
Nn6g35748 Nelumbo nucifera
Oeu006758.2 Olea europaea
Oeu019512.1 Olea europaea
Os07g0572600 Oryza sativa ssp. japonica
Peaxi162Scf00038g02329 Petunia axillaris
PGR102G1671 Punica granatum
PGSC0003DMG400004868 Solanum tuberosum
PGSC0003DMG400009153 Solanum tuberosum
Phvul.009G261000 Phaseolus vulgaris
Phvul.010G122400 Phaseolus vulgaris
Potri.003G073500 Populus trichocarpa
Pp3c26_250 Physcomitrium patens
Prupe.3G030300 Prunus persica
Psat0s3082g0080 Pisum sativum
Psat4g164760 Pisum sativum
PSO017G4350 Papaver somniferum
PSO675G6030 Papaver somniferum
PSO675G7039 Papaver somniferum
QL05p000971 Quercus lobata
RcHm_v2.0_Chr2g0148131 Rosa chinensis
Rhsim08G0245500 Rhododendron simsii
Rhsim12G0213400 Rhododendron simsii
Sabra03G0044100 Salix brachista
SalBow6G2264 Salvia bowleyana
Sc12g0011020 Simmondsia chinensis
Sc15g0000850 Simmondsia chinensis
Sed0004077 Sechium edule
Sed0013389 Sechium edule
SEGI_38726 Sequoiadendron giganteum
SGA_v2.0_scaffold68G22825 Striga asiatica
SGA_v2.0_scaffold71G23945 Striga asiatica
SHI25231 Sapria himalayana
SMO114G0065 Selaginella moellendorffii
SMO117G0010 Selaginella moellendorffii
SMO117G0321 Selaginella moellendorffii
SMO117G0353 Selaginella moellendorffii
Solyc03g123720.4 Solanum lycopersicum
Solyc06g063120.4 Solanum lycopersicum
Sopen03g041490 Solanum pennellii
Sopen06g022570 Solanum pennellii
Sp1g15400 Schrenkiella parvula
Sp1g40290 Schrenkiella parvula
Sp6g12580 Schrenkiella parvula
SpUn0015_0050 Schrenkiella parvula
SpUn0039_0040 Schrenkiella parvula
SpUn0425_0010 Schrenkiella parvula
TAR629G0617 Trochodendron aralioides
THA.LOC104810589 Tarenaya hassleriana
THA.LOC104812278 Tarenaya hassleriana
THA.LOC104822610 Tarenaya hassleriana
Thecc.06G131300 Theobroma cacao
Thhalv10007186m.g Eutrema salsugineum
Thhalv10011359m.g Eutrema salsugineum
Thhalv10013133m.g Eutrema salsugineum
TPR.G26460 Trifolium pratense
TPR.G32178 Trifolium pratense
TWI23G1304 Tripterygium wilfordii
TWI59G0476 Tripterygium wilfordii
unitig_748.g7075 Utricularia gibba
vmacro17068 Vaccinium macrocarpon
vmacro18715 Vaccinium macrocarpon
vmacro22011 Vaccinium macrocarpon
VMungo0251G1316 Vigna mungo
VMungo1309G3118 Vigna mungo
Zm00001eb107370 Zea mays

User provided reference genes

Program Settings