Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p08520 Brassica napus
A06p42610 Brassica napus
A07p35160 Brassica napus
Aa31LG2G6640 Aethionema arabicum
Aa31LG7G8890 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1632 Anthoceros agrestis
Actinidia13689 Actinidia chinensis
Actinidia18947 Actinidia chinensis
Ah.02g127240 Amaranthus hybridus
AL1G24920 Arabidopsis lyrata
AL2G27720 Arabidopsis lyrata
AL5G14210 Arabidopsis lyrata
Aqoxy3G03872 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1PAF21 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AE21JM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I1PY21 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W59YBM Arachis hypogaea
AT1G13230 Arabidopsis thaliana
AT1G68780 Arabidopsis thaliana
AT3G25670 Arabidopsis thaliana
ATR0598G139 Amborella trichopoda
Atru.chr11.1386 Acer truncatum
Atru.chr9.723 Acer truncatum
AUR62002936 Chenopodium quinoa
AUR62007745 Chenopodium quinoa
BcaB03g15848 Brassica carinata
BcaC02g12066 Brassica carinata
BcaC06g31126 Brassica carinata
BcaC06g33970 Brassica carinata
BcaC08g46327 Brassica carinata
BolC5t29758H Brassica oleracea
BolC6t39314H Brassica oleracea
BolC7t43985H Brassica oleracea
BraA06t24047Z Brassica rapa
BraA06t27176Z Brassica rapa
BraA07t31109Z Brassica rapa
C04p08320 Brassica napus
C05p10120 Brassica napus
C06p41110 Brassica napus
C07p34540 Brassica napus
CAN.G184.73 Capsicum annuum
CAN.G587.74 Capsicum annuum
CANSAT64G1561 Cannabis sativa
CANSAT80G0728 Cannabis sativa
CARHR013610 Cardamine hirsuta
CARHR061600 Cardamine hirsuta
CARHR288530 Cardamine hirsuta
Carub.0001s1296 Capsella rubella
Carub.0002s1534 Capsella rubella
Carub.0005s0349 Capsella rubella
Ca_10523_v3 Cicer arietinum L.
Cc11_g10770 Coffea canephora
CDE10G0442 Ceratophyllum demersum
CDE10G0685 Ceratophyllum demersum
Cfa006556 Carpinus fangiana
Cfa018652 Carpinus fangiana
Cfa019840 Carpinus fangiana
Ciclev10024126m.g Citrus clementina
Ciclev10031263m.g Citrus clementina
CiPaw.15G002100 Carya illinoinensis
CiPaw.16G002200 Carya illinoinensis
CiPaw.16G083000 Carya illinoinensis
ClCG05G023120 Citrullus lanatus
COL.COLO4_32202 Corchorus olitorius
Cpa.g.sc411.1 Carica papaya
CsaV3_5G033870 Cucumis sativus L.
CSS0026916 Camellia sinensis var. sinensis
CSS0031685 Camellia sinensis var. sinensis
CSS0044708 Camellia sinensis var. sinensis
DCAR_023697 Daucus carota
DCAR_026710 Daucus carota
DCAR_030094 Daucus carota
Dinv16524 Davidia involucrata
Dinv36889 Davidia involucrata
Duzib248G1649 Durio zibethinus
Duzib251G0710 Durio zibethinus
ECA233G2075 Erigeron canadensis
ECA234G4493 Erigeron canadensis
EL10Ac6g14523 Beta vulgaris
Eucgr.B00671 Eucalyptus grandis
Eucgr.G02362 Eucalyptus grandis
Eucgr.G02363 Eucalyptus grandis
Eucgr.G02367 Eucalyptus grandis
FAN07G2067 Fragaria x ananassa
FAN08G3188 Fragaria x ananassa
FAN12G1675 Fragaria x ananassa
FAN13G0334 Fragaria x ananassa
FAN17G0161 Fragaria x ananassa
FAN18G0541 Fragaria x ananassa
FAN18G3304 Fragaria x ananassa
FAN22G1997 Fragaria x ananassa
FvH4_4g28250 Fragaria vesca
FvH4_5g12850 Fragaria vesca
Glyma.01G090200 Glycine max
Glyma.02G101900 Glycine max
Glyma.05G014600 Glycine max
Glyma.10G205300 Glycine max
Glyma.17G123100 Glycine max
Glyma.20G185100 Glycine max
Gohir.A07G056500 Gossypium hirsutum
Gohir.A12G172500 Gossypium hirsutum
Gohir.D07G060800 Gossypium hirsutum
Gohir.D12G175000 Gossypium hirsutum
Gorai.001G064500 Gossypium raimondii
Gorai.008G187600 Gossypium raimondii
GSVIVG01011974001 Vitis vinifera
HanXRQChr08g0214451 Helianthus annuus
HanXRQChr16g0528811 Helianthus annuus
HanXRQChr17g0568131 Helianthus annuus
Haze_04225 Corylus avellana
Haze_17415 Corylus avellana
Haze_18580 Corylus avellana
Haze_21962 Corylus avellana
Hma1.2p1_0605F.1_g187870 Hydrangea macrophylla
Hma1.2p1_3548F.1_g336690 Hydrangea macrophylla
HPP92_010185 Vanilla planifolia
HPP92_020266 Vanilla planifolia
HPP92_021348 Vanilla planifolia
HPP92_021353 Vanilla planifolia
HPP92_021837 Vanilla planifolia
Hund05775 Selenicereus undatus
Hund25113 Selenicereus undatus
Lalb_Chr02g0151851 Lupinus albus
Lalb_Chr04g0255021 Lupinus albus
Lalb_Chr04g0255031 Lupinus albus
Lalb_Chr06g0170261 Lupinus albus
Lalb_Chr07g0178531 Lupinus albus
Lalb_Chr13g0302451 Lupinus albus
Lj2g0006164 Lotus japonicus
Lj5g0001748 Lotus japonicus
Lj6C767T9 Lonicera japonica
Lj9A433T93 Lonicera japonica
Lsat_1_v5_gn_4_19380 Lactuca sativa
Lsat_1_v5_gn_8_37500 Lactuca sativa
Manes.06G074100 Manihot esculenta
Manes.14G096200 Manihot esculenta
MD13G1048600 Malus domestica
MD16G1049900 Malus domestica
Medtr1g093900 Medicago truncatula
MELO3C012205.2 Cucumis melo
Migut.L01108 Erythranthe guttata
MSTRG.13498 Avicennia marina
MSTRG.809 Avicennia marina
Nitab4.5_0001178g0100 Nicotiana tabacum
Nitab4.5_0005020g0010 Nicotiana tabacum
Nitab4.5_0011615g0010 Nicotiana tabacum
Nn3g17677 Nelumbo nucifera
Nn4g23681 Nelumbo nucifera
Nn4g24646 Nelumbo nucifera
Oeu013021.1 Olea europaea
Oeu024110.1 Olea europaea
Oeu044392.1 Olea europaea
Os01g0110800 Oryza sativa ssp. japonica
Peaxi162Scf00013g00843 Petunia axillaris
Peaxi162Scf00367g00737 Petunia axillaris
PGR083G2200 Punica granatum
PGR119G0899 Punica granatum
PGSC0003DMG400000819 Solanum tuberosum
PGSC0003DMG400004056 Solanum tuberosum
Phvul.003G025400 Phaseolus vulgaris
Phvul.003G178800 Phaseolus vulgaris
Phvul.007G101600 Phaseolus vulgaris
Potri.008G114700 Populus trichocarpa
Pp3c8_14320 Physcomitrium patens
Prupe.1G303600 Prunus persica
Prupe.5G215600 Prunus persica
Psat0s650g0040 Pisum sativum
PSO063G5607 Papaver somniferum
PSO782G4373 Papaver somniferum
QL01p000932 Quercus lobata
QL10p022375 Quercus lobata
RcHm_v2.0_Chr4g0436111 Rosa chinensis
RcHm_v2.0_Chr7g0184381 Rosa chinensis
Rhsim09G0113900 Rhododendron simsii
Rhsim12G0145100 Rhododendron simsii
RhsimUnG0007200 Rhododendron simsii
Sabra08G0086900 Salix brachista
SalBow8G3573 Salvia bowleyana
Sc11g0002980 Simmondsia chinensis
Sed0008474 Sechium edule
Sed0013529 Sechium edule
SGA_v2.0_scaffold16G07874 Striga asiatica
Solyc05g009990.4 Solanum lycopersicum
Solyc06g069290.3 Solanum lycopersicum
Sopen05g005800 Solanum pennellii
Sopen06g026550 Solanum pennellii
Sp1g11750 Schrenkiella parvula
Sp2g14930 Schrenkiella parvula
Sp5g23890 Schrenkiella parvula
TAR622G0548 Trochodendron aralioides
TAR629G0802 Trochodendron aralioides
THA.LOC104821970 Tarenaya hassleriana
THA.LOC104824039 Tarenaya hassleriana
THA.LOC104825720 Tarenaya hassleriana
Thecc.02G363100 Theobroma cacao
Thecc.03G115600 Theobroma cacao
Thhalv10004133m.g Eutrema salsugineum
Thhalv10009891m.g Eutrema salsugineum
Thhalv10018585m.g Eutrema salsugineum
TPR.G9822 Trifolium pratense
TWI75G1450 Tripterygium wilfordii
TWI79G0370 Tripterygium wilfordii
vmacro10515 Vaccinium macrocarpon
vmacro16458 Vaccinium macrocarpon
VMungo0464G0717 Vigna mungo
VMungo0720G0918 Vigna mungo
VMungo1215G0439 Vigna mungo
VMungo1215G2332 Vigna mungo
Zm00001eb126430 Zea mays

User provided reference genes

Program Settings