Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p26560 Brassica napus
A08p08660 Brassica napus
A09p33080 Brassica napus
Aa31LG6G7730 Aethionema arabicum
Aa31LG9G11620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2732 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.710 Anthoceros agrestis
Actinidia08726 Actinidia chinensis
Actinidia18693 Actinidia chinensis
Actinidia28274 Actinidia chinensis
Actinidia34293 Actinidia chinensis
Ah.09g237290 Amaranthus hybridus
AL1G47600 Arabidopsis lyrata
AL6G44360 Arabidopsis lyrata
AL6G44380 Arabidopsis lyrata
Aqoxy5G04400 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4JD467 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X6Z9M4 Arachis hypogaea
AT1G33230 Arabidopsis thaliana
AT4G10430 Arabidopsis thaliana
ATR0579G025 Amborella trichopoda
Atru.chr9.2608 Acer truncatum
AUR62002554 Chenopodium quinoa
AUR62014810 Chenopodium quinoa
AUR62017004 Chenopodium quinoa
AUR62029972 Chenopodium quinoa
BcaB04g17923 Brassica carinata
BcaB05g23900 Brassica carinata
BcaC03g16395 Brassica carinata
BcaC07g37565 Brassica carinata
BcaC08g43889 Brassica carinata
BolC2t10266H Brassica oleracea
BolC6t36431H Brassica oleracea
BraA02t07659Z Brassica rapa
BraA08t32879Z Brassica rapa
BraA09t38852Z Brassica rapa
C02p42280 Brassica napus
C06p12740 Brassica napus
CAN.G303.65 Capsicum annuum
CANSAT21G1439 Cannabis sativa
CARHR032530 Cardamine hirsuta
CARHR032590 Cardamine hirsuta
CARHR256220 Cardamine hirsuta
Carub.0001s3142 Capsella rubella
Carub.0006s2906 Capsella rubella
Ca_11396_v3 Cicer arietinum L.
CBR_g19749 Chara braunii
Cc02_g00530 Coffea canephora
CDE02G3182 Ceratophyllum demersum
CDE04G1112 Ceratophyllum demersum
CDE04G2638 Ceratophyllum demersum
CDE04G3491 Ceratophyllum demersum
CDE12G0880 Ceratophyllum demersum
Cfa011873 Carpinus fangiana
Ciclev10020756m.g Citrus clementina
CiPaw.11G106000 Carya illinoinensis
CiPaw.12G073700 Carya illinoinensis
ClCG01G001210 Citrullus lanatus
COL.COLO4_20922 Corchorus olitorius
Cpa.g.sc37.119 Carica papaya
Cre09.g390282 Chlamydomonas reinhardtii
CsaV3_5G001330 Cucumis sativus L.
CSS0018524 Camellia sinensis var. sinensis
CSS0030339 Camellia sinensis var. sinensis
CSS0032691 Camellia sinensis var. sinensis
CSS0033441 Camellia sinensis var. sinensis
CSS0035431 Camellia sinensis var. sinensis
CSS0049301 Camellia sinensis var. sinensis
DCAR_010553 Daucus carota
DCAR_020396 Daucus carota
Dinv10539 Davidia involucrata
Dinv11462 Davidia involucrata
Dinv17274 Davidia involucrata
Dinv29184 Davidia involucrata
Dinv29185 Davidia involucrata
Duzib068G0649 Durio zibethinus
Duzib084G0151 Durio zibethinus
Duzib205G1067 Durio zibethinus
ECA234G3139 Erigeron canadensis
ECA236G1073 Erigeron canadensis
EL10Ac3g06251 Beta vulgaris
EL10Ac8g20374 Beta vulgaris
Eucgr.D02540 Eucalyptus grandis
Eucgr.E01133 Eucalyptus grandis
FAN04G1600 Fragaria x ananassa
FAN08G0072 Fragaria x ananassa
FAN13G1021 Fragaria x ananassa
FAN18G2848 Fragaria x ananassa
FvH4_5g10150 Fragaria vesca
Glyma.10G295500 Glycine max
Glyma.20G245400 Glycine max
Gohir.A02G094400 Gossypium hirsutum
Gohir.A11G017300 Gossypium hirsutum
Gohir.A11G017400 Gossypium hirsutum
Gohir.A12G243700 Gossypium hirsutum
Gohir.D03G089100 Gossypium hirsutum
Gohir.D11G017100 Gossypium hirsutum
Gohir.D11G017200 Gossypium hirsutum
Gohir.D12G244701 Gossypium hirsutum
Gorai.002G179600 Gossypium raimondii
Gorai.003G072400 Gossypium raimondii
Gorai.007G018000 Gossypium raimondii
Gorai.007G018100 Gossypium raimondii
Gorai.008G059100 Gossypium raimondii
Gorai.008G262300 Gossypium raimondii
Gorai.012G125600 Gossypium raimondii
GSVIVG01019720001 Vitis vinifera
HanXRQChr04g0116771 Helianthus annuus
HanXRQChr11g0327201 Helianthus annuus
HanXRQChr12g0385351 Helianthus annuus
HanXRQChr17g0556021 Helianthus annuus
Haze_09234 Corylus avellana
Haze_09235 Corylus avellana
Hma1.2p1_0115F.1_g055850 Hydrangea macrophylla
HPP92_015201 Vanilla planifolia
HPP92_025402 Vanilla planifolia
HPP92_025471 Vanilla planifolia
Hund08704 Selenicereus undatus
Hund25962 Selenicereus undatus
Lalb_Chr02g0144281 Lupinus albus
Lalb_Chr06g0164471 Lupinus albus
Lalb_Chr21g0307571 Lupinus albus
Lj2A147G46 Lonicera japonica
Lj3C891G10 Lonicera japonica
Lj5g0004131 Lotus japonicus
Lsat_1_v5_gn_0_9600 Lactuca sativa
Lsat_1_v5_gn_4_50621 Lactuca sativa
Lsat_1_v5_gn_7_23521 Lactuca sativa
Manes.01G000300 Manihot esculenta
Mapoly0153s0034 Marchantia polymorpha
MBI04_g04799_MAGBIO Magnolia biondii
MBI12_g01758_MAGBIO Magnolia biondii
MCO09G171 Micromonas commoda
MD03G1098700 Malus domestica
MD06G1127700 Malus domestica
MD14G1143500 Malus domestica
Medtr1g116510 Medicago truncatula
MELO3C005814.2 Cucumis melo
Migut.F00114 Erythranthe guttata
Migut.F00964 Erythranthe guttata
MSTRG.26946 Avicennia marina
MSTRG.8552 Avicennia marina
Nitab4.5_0000021g0290 Nicotiana tabacum
Nitab4.5_0002691g0010 Nicotiana tabacum
Nn7g38179 Nelumbo nucifera
Oeu006168.1 Olea europaea
Oeu035876.1 Olea europaea
Oeu055431.1 Olea europaea
Oeu063746.1 Olea europaea
Os02g0106800 Oryza sativa ssp. japonica
Os08g0152800 Oryza sativa ssp. japonica
Peaxi162Scf00542g00014 Petunia axillaris
Peaxi162Scf01650g00041 Petunia axillaris
PGR031G1665 Punica granatum
PGR042G1295 Punica granatum
PGSC0003DMG400000544 Solanum tuberosum
Phvul.007G004400 Phaseolus vulgaris
Potri.001G454400 Populus trichocarpa
Potri.011G147500 Populus trichocarpa
Pp3c15_14570 Physcomitrium patens
Pp3c15_17280 Physcomitrium patens
Pp3c9_18360 Physcomitrium patens
Pp3c9_21850 Physcomitrium patens
Prupe.5G137500 Prunus persica
Psat6g240960 Pisum sativum
PSO063G4824 Papaver somniferum
PSO384G4355 Papaver somniferum
QL02p026579 Quercus lobata
QL12p002913 Quercus lobata
RcHm_v2.0_Chr7g0188151 Rosa chinensis
Rhsim03G0218900 Rhododendron simsii
Rhsim09G0211400 Rhododendron simsii
Sabra11G0132600 Salix brachista
Sabra16G0307300 Salix brachista
SalBow2G3519 Salvia bowleyana
SalBow4G2554 Salvia bowleyana
Sc01g0010940 Simmondsia chinensis
Sed0000082 Sechium edule
Sed0010900 Sechium edule
SEGI_02342 Sequoiadendron giganteum
SEGI_26008 Sequoiadendron giganteum
SEGI_33213 Sequoiadendron giganteum
SEGI_40111 Sequoiadendron giganteum
SGA_v2.0_scaffold165G38215 Striga asiatica
SGA_v2.0_scaffold59G20783 Striga asiatica
SHI06883 Sapria himalayana
SMO117G0167 Selaginella moellendorffii
Solyc03g096810.3 Solanum lycopersicum
Sopen03g027550 Solanum pennellii
Sp1g28680 Schrenkiella parvula
Sp6g07030 Schrenkiella parvula
TAR374G1299 Trochodendron aralioides
TAR375G0039 Trochodendron aralioides
THA.LOC104806468 Tarenaya hassleriana
THA.LOC104813070 Tarenaya hassleriana
THA.LOC104815499 Tarenaya hassleriana
Thecc.03G213500 Theobroma cacao
Thhalv10008088m.g Eutrema salsugineum
Thhalv10028773m.g Eutrema salsugineum
TPR.G10396 Trifolium pratense
TWI60G0278 Tripterygium wilfordii
TWI81G0087 Tripterygium wilfordii
unitig_578.g16669 Utricularia gibba
unitig_747.g21704 Utricularia gibba
vmacro06480 Vaccinium macrocarpon
vmacro10177 Vaccinium macrocarpon
VMungo0720G2040 Vigna mungo
Zm00001eb172770 Zea mays
Zm00001eb229520 Zea mays
Zm00001eb416220 Zea mays

User provided reference genes

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