Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p07090 Brassica napus
A07p18390 Brassica napus
Aa31sc18G110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2351 Anthoceros agrestis
Actinidia23773 Actinidia chinensis
Actinidia24081 Actinidia chinensis
AL3G41110 Arabidopsis lyrata
AL4G22480 Arabidopsis lyrata
Aqoxy4G03220 Aquilegia oxysepala
Aqoxy7G03388 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.30WSHQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3Y6RAV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZI71EU Arachis hypogaea
AT2G27800 Arabidopsis thaliana
AT3G25210 Arabidopsis thaliana
ATR0068G034 Amborella trichopoda
ATR0580G025 Amborella trichopoda
ATR0665G439 Amborella trichopoda
Atru.BG.118.p Acer truncatum
Atru.chr3.3352 Acer truncatum
Atru.chr6.1455 Acer truncatum
AUR62001160 Chenopodium quinoa
AUR62022161 Chenopodium quinoa
AUR62029362 Chenopodium quinoa
AUR62034282 Chenopodium quinoa
BcaB02g10117 Brassica carinata
BcaB06g26711 Brassica carinata
BcaC02g10907 Brassica carinata
BcaC06g35800 Brassica carinata
BolC4t23878H Brassica oleracea
BolC7t41537H Brassica oleracea
BraA07t28496Z Brassica rapa
BraA07t29555Z Brassica rapa
C04p23800 Brassica napus
C07p10710 Brassica napus
CAN.G475.21 Capsicum annuum
CAN.G874.18 Capsicum annuum
CANSAT01G2277 Cannabis sativa
CANSAT01G2464 Cannabis sativa
CANSAT54G0200 Cannabis sativa
CARHR101560 Cardamine hirsuta
CARHR120500 Cardamine hirsuta
Carub.0003s2558 Capsella rubella
Carub.0004s0854 Capsella rubella
Ca_00516_v3 Cicer arietinum L.
Ca_19244_v3 Cicer arietinum L.
Cc01_g11540 Coffea canephora
Cc01_g16440 Coffea canephora
CDE02G0959 Ceratophyllum demersum
CDE08G0247 Ceratophyllum demersum
CDE08G0620 Ceratophyllum demersum
Cfa011358 Carpinus fangiana
Cfa016598 Carpinus fangiana
Ciclev10028524m.g Citrus clementina
Ciclev10031787m.g Citrus clementina
CiPaw.13G051500 Carya illinoinensis
CiPaw.14G078200 Carya illinoinensis
ClCG03G002330 Citrullus lanatus
ClCG09G011490 Citrullus lanatus
COL.COLO4_19319 Corchorus olitorius
Cpa.g.sc13.131 Carica papaya
Cpa.g.sc8.109 Carica papaya
CsaV3_1G013010 Cucumis sativus L.
CsaV3_3G030190 Cucumis sativus L.
CSS0032254 Camellia sinensis var. sinensis
CSS0040920 Camellia sinensis var. sinensis
CSS0044973 Camellia sinensis var. sinensis
DCAR_008418 Daucus carota
DCAR_018829 Daucus carota
Dinv03604 Davidia involucrata
Dinv12066 Davidia involucrata
Dinv28833 Davidia involucrata
Duzib133G0357 Durio zibethinus
Duzib168G2154 Durio zibethinus
ECA236G4950 Erigeron canadensis
ECA238G4713 Erigeron canadensis
EL10Ac6g13413 Beta vulgaris
EL10Ac7g17952 Beta vulgaris
Eucgr.H00752 Eucalyptus grandis
FAN11G1759 Fragaria x ananassa
FAN16G1502 Fragaria x ananassa
FAN16G2484 Fragaria x ananassa
FAN21G3323 Fragaria x ananassa
FAN25G2586 Fragaria x ananassa
FvH4_3g25580 Fragaria vesca
FvH4_3g33090 Fragaria vesca
Glyma.12G071400 Glycine max
Glyma.13G220800 Glycine max
Glyma.15G091700 Glycine max
Gohir.A07G091500 Gossypium hirsutum
Gohir.A08G008400 Gossypium hirsutum
Gohir.D07G096200 Gossypium hirsutum
Gohir.D08G018400 Gossypium hirsutum
Gorai.001G103500 Gossypium raimondii
Gorai.004G012900 Gossypium raimondii
GSVIVG01009330001 Vitis vinifera
GSVIVG01025143001 Vitis vinifera
HanXRQChr06g0172221 Helianthus annuus
HanXRQChr13g0419931 Helianthus annuus
Haze_19599 Corylus avellana
Haze_23904 Corylus avellana
Hma1.2p1_0071F.1_g038080 Hydrangea macrophylla
HPP92_000898 Vanilla planifolia
Hund16389 Selenicereus undatus
Lalb_Chr03g0027151 Lupinus albus
Lalb_Chr19g0137401 Lupinus albus
Lalb_Chr20g0117691 Lupinus albus
Lj2P1035T18 Lonicera japonica
Lj2P1121T80 Lonicera japonica
Lj3A22G11 Lonicera japonica
Lj3g0014788 Lotus japonicus
Lj6g0012572 Lotus japonicus
Lju470C2G3 Lonicera japonica
Lsat_1_v5_gn_2_97841 Lactuca sativa
Lsat_1_v5_gn_8_89041 Lactuca sativa
Manes.11G141800 Manihot esculenta
Manes.13G051900 Manihot esculenta
MBI06_g23074_MAGBIO Magnolia biondii
MBI06_g23075_MAGBIO Magnolia biondii
MBI06_g43058_MAGBIO Magnolia biondii
MBI06_g43059_MAGBIO Magnolia biondii
MBI15_g18240_MAGBIO Magnolia biondii
MD03G1104000 Malus domestica
MD05G1166500 Malus domestica
MD10G1156500 Malus domestica
MD11G1131200 Malus domestica
Medtr2g018820 Medicago truncatula
Medtr4g060570 Medicago truncatula
MELO3C005032.2 Cucumis melo
MELO3C022733.2 Cucumis melo
Migut.D02192 Erythranthe guttata
Migut.N00643 Erythranthe guttata
MSTRG.12763 Avicennia marina
Nitab4.5_0000131g0200 Nicotiana tabacum
Nitab4.5_0003020g0090 Nicotiana tabacum
Nitab4.5_0005913g0040 Nicotiana tabacum
Nitab4.5_0019111g0010 Nicotiana tabacum
Nn2g12405 Nelumbo nucifera
Nn7g37996 Nelumbo nucifera
Nn7g38080 Nelumbo nucifera
Oeu003624.1 Olea europaea
Oeu005554.1 Olea europaea
Oeu014784.1 Olea europaea
Oeu016377.1 Olea europaea
Oeu017388.1 Olea europaea
Oeu037901.1 Olea europaea
Oeu055977.1 Olea europaea
Os01g0747600 Oryza sativa ssp. japonica
Os06g0184866 Oryza sativa ssp. japonica
Peaxi162Scf00454g00034 Petunia axillaris
PGR004G2397 Punica granatum
PGR083G0899 Punica granatum
PGSC0003DMG400009341 Solanum tuberosum
PGSC0003DMG401020106 Solanum tuberosum
PGSC0003DMG402020106 Solanum tuberosum
Phvul.006G167600 Phaseolus vulgaris
Phvul.011G073100 Phaseolus vulgaris
Potri.002G248100 Populus trichocarpa
Potri.018G093700 Populus trichocarpa
Prupe.6G095500 Prunus persica
Prupe.8G194300 Prunus persica
Psat1g191400 Pisum sativum
Psat7g223640 Pisum sativum
Psat7g224600 Pisum sativum
PSO017G6569 Papaver somniferum
QL01p037328 Quercus lobata
QL09p049342 Quercus lobata
RcHm_v2.0_Chr5g0046411 Rosa chinensis
RcHm_v2.0_Chr5g0060431 Rosa chinensis
RcHm_v2.0_Chr7g0223121 Rosa chinensis
RcHm_v2.0_Chr7g0223131 Rosa chinensis
Rhsim01G0250000 Rhododendron simsii
Rhsim13G0092700 Rhododendron simsii
Sabra02G0188800 Salix brachista
Sabra18G0080600 Salix brachista
SalBow3G0099 Salvia bowleyana
SalBow3G3646 Salvia bowleyana
Sc17g0001920 Simmondsia chinensis
Sc21g0003940 Simmondsia chinensis
Sed0010667 Sechium edule
Sed0025116 Sechium edule
SEGI_09666 Sequoiadendron giganteum
SEGI_29222 Sequoiadendron giganteum
SGA_v2.0_scaffold97G29181 Striga asiatica
SHI02273 Sapria himalayana
SHI06049 Sapria himalayana
Solyc04g076370.4 Solanum lycopersicum
Solyc06g083200.3 Solanum lycopersicum
Sopen04g030130 Solanum pennellii
Sopen06g034590 Solanum pennellii
Sp3g22830 Schrenkiella parvula
Sp4g10640 Schrenkiella parvula
TAR623G1033 Trochodendron aralioides
TAR625G0208 Trochodendron aralioides
THA.LOC104800555 Tarenaya hassleriana
THA.LOC104804636 Tarenaya hassleriana
Thecc.01G215400 Theobroma cacao
Thecc.09G259500 Theobroma cacao
Thhalv10002564m.g Eutrema salsugineum
Thhalv10016739m.g Eutrema salsugineum
TPR.G36407 Trifolium pratense
TWI18G0642 Tripterygium wilfordii
TWI75G1283 Tripterygium wilfordii
vmacro00255 Vaccinium macrocarpon
vmacro00259 Vaccinium macrocarpon
vmacro13688 Vaccinium macrocarpon
VMungo0540G1511 Vigna mungo
VMungo1127G1215 Vigna mungo
Zm00001eb153040 Zea mays
Zm00001eb374560 Zea mays

User provided reference genes

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