Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p24080 Brassica napus
A02p30370 Brassica napus
A10p32010 Brassica napus
Aa31LG1G21210 Aethionema arabicum
Aa31LG1G21340 Aethionema arabicum
Aa31LG3G870 Aethionema arabicum
Aa31LG4G18700 Aethionema arabicum
Actinidia15263 Actinidia chinensis
Ah.03g144400 Amaranthus hybridus
AL5G30670 Arabidopsis lyrata
AL6G13740 Arabidopsis lyrata
Aqoxy1G00384 Aquilegia oxysepala
Aqoxy1G00385 Aquilegia oxysepala
Aqoxy6G01421 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0LCG0H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RZZ5RD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UDMY6J Arachis hypogaea
AT3G50520 Arabidopsis thaliana
AT5G04120 Arabidopsis thaliana
ATR1133G056 Amborella trichopoda
Atru.chr13.623 Acer truncatum
Atru.chr3.402 Acer truncatum
Atru.chr3.403 Acer truncatum
Atru.chr3.404 Acer truncatum
AUR62001958 Chenopodium quinoa
AUR62003848 Chenopodium quinoa
AUR62003849 Chenopodium quinoa
AUR62027514 Chenopodium quinoa
AUR62027515 Chenopodium quinoa
BcaB05g21773 Brassica carinata
BcaB05g21776 Brassica carinata
BcaB05g21786 Brassica carinata
BcaB05g23220 Brassica carinata
BcaC03g16892 Brassica carinata
BcaC06g32115 Brassica carinata
BcaC06g33091 Brassica carinata
BcaC06g33304 Brassica carinata
BcaC09g50033 Brassica carinata
BolC1t02916H Brassica oleracea
BolC2t06132H Brassica oleracea
BolC4t28656H Brassica oleracea
BolC7t45099H Brassica oleracea
BolC9t60012H Brassica oleracea
BraA01t02321Z Brassica rapa
BraA02t04798Z Brassica rapa
BraA02t08052Z Brassica rapa
BraA10t45245Z Brassica rapa
C01p29750 Brassica napus
C02p01670 Brassica napus
C02p47890 Brassica napus
C04p71500 Brassica napus
C07p45780 Brassica napus
C09p72730 Brassica napus
CAN.G470.17 Capsicum annuum
CANSAT01G0500 Cannabis sativa
CARHR160020 Cardamine hirsuta
CARHR209150 Cardamine hirsuta
Carub.0005s1685 Capsella rubella
Carub.0006s0307 Capsella rubella
Ca_22192_v3 Cicer arietinum L.
Ca_22193_v3 Cicer arietinum L.
Ca_28868_v3 Cicer arietinum L.
Cc07_g05810 Coffea canephora
CDE10G0039 Ceratophyllum demersum
Cfa003992 Carpinus fangiana
Ciclev10026175m.g Citrus clementina
CiPaw.01G022000 Carya illinoinensis
CiPaw.02G009800 Carya illinoinensis
ClCG02G013170 Citrullus lanatus
COL.COLO4_11375 Corchorus olitorius
Cpa.g.sc6.384 Carica papaya
Cre10.g460300 Chlamydomonas reinhardtii
CsaV3_2G017260 Cucumis sativus L.
CSS0018527 Camellia sinensis var. sinensis
CSS0036818 Camellia sinensis var. sinensis
DCAR_025713 Daucus carota
Dinv29962 Davidia involucrata
Dinv35999 Davidia involucrata
Dinv39879 Davidia involucrata
Duzib147G0433 Durio zibethinus
Duzib187G0486 Durio zibethinus
Duzib264G0300 Durio zibethinus
Duzib264G0339 Durio zibethinus
EL10Ac6g15147 Beta vulgaris
EL10Ac6g15148 Beta vulgaris
Eucgr.I00955 Eucalyptus grandis
Eucgr.I00958 Eucalyptus grandis
Eucgr.I00961 Eucalyptus grandis
Eucgr.I00962 Eucalyptus grandis
Eucgr.I00964 Eucalyptus grandis
Eucgr.I00966 Eucalyptus grandis
Eucgr.I00967 Eucalyptus grandis
FAN19G2046 Fragaria x ananassa
FAN23G2127 Fragaria x ananassa
FAN26G1196 Fragaria x ananassa
FAN28G2645 Fragaria x ananassa
FvH4_1g15610 Fragaria vesca
Glyma.05G080400 Glycine max
Glyma.05G080500 Glycine max
Gohir.A11G189900 Gossypium hirsutum
Gohir.A12G083066 Gossypium hirsutum
Gohir.D11G196700 Gossypium hirsutum
Gohir.D12G088900 Gossypium hirsutum
Gorai.007G210600 Gossypium raimondii
Gorai.008G074200 Gossypium raimondii
GSVIVG01002941001 Vitis vinifera
GSVIVG01007480001 Vitis vinifera
HanXRQChr14g0441141 Helianthus annuus
HanXRQChr15g0489981 Helianthus annuus
HanXRQChr15g0490001 Helianthus annuus
Haze_15431 Corylus avellana
Haze_27540 Corylus avellana
Hma1.2p1_0260F.1_g104690 Hydrangea macrophylla
HPP92_010952 Vanilla planifolia
Hund13571 Selenicereus undatus
Hund13572 Selenicereus undatus
Hund16314 Selenicereus undatus
Lalb_Chr05g0226691 Lupinus albus
Lalb_Chr16g0388381 Lupinus albus
Lj4g0007404 Lotus japonicus
Lj4g0023396 Lotus japonicus
Lj7C58G0 Lonicera japonica
Lj7C59G1 Lonicera japonica
Lj7C61G5 Lonicera japonica
Manes.13G125800 Manihot esculenta
Mapoly0136s0032 Marchantia polymorpha
MBI02_g21207_MAGBIO Magnolia biondii
MBI02_g44921_MAGBIO Magnolia biondii
MBI19_g22600_MAGBIO Magnolia biondii
MBI19_g42984_MAGBIO Magnolia biondii
MCO11G260 Micromonas commoda
MD02G1168200 Malus domestica
MD15G1280300 Malus domestica
MD15G1280400 Malus domestica
MD15G1280500 Malus domestica
Medtr8g079760 Medicago truncatula
Medtr8g079780 Medicago truncatula
MELO3C020929.2 Cucumis melo
Migut.H00458 Erythranthe guttata
MSTRG.23771 Avicennia marina
Nitab4.5_0000310g0250 Nicotiana tabacum
Nitab4.5_0000440g0150 Nicotiana tabacum
Nitab4.5_0000728g0090 Nicotiana tabacum
Nitab4.5_0004123g0010 Nicotiana tabacum
Nn7g36805 Nelumbo nucifera
Oeu004871.1 Olea europaea
Oeu042248.1 Olea europaea
Os02g0325401 Oryza sativa ssp. japonica
Os08g0476400 Oryza sativa ssp. japonica
Os10g0344800 Oryza sativa ssp. japonica
Os11g0138400 Oryza sativa ssp. japonica
Os11g0138600 Oryza sativa ssp. japonica
Os12g0135051 Oryza sativa ssp. japonica
Os12g0135100 Oryza sativa ssp. japonica
Peaxi162Scf00049g01317 Petunia axillaris
PGR142G3760 Punica granatum
PGSC0003DMG400000753 Solanum tuberosum
Phvul.003G246100 Phaseolus vulgaris
Phvul.003G246200 Phaseolus vulgaris
Potri.007G040700 Populus trichocarpa
Pp3c24_9340 Physcomitrium patens
Pp3c8_13210 Physcomitrium patens
Prupe.7G136800 Prunus persica
Prupe.7G136900 Prunus persica
Psat4g088040 Pisum sativum
Psat4g088120 Pisum sativum
PSO339G0869 Papaver somniferum
PSO339G2845 Papaver somniferum
PSO339G4170 Papaver somniferum
PSO384G1057 Papaver somniferum
PSO384G1806 Papaver somniferum
PSO384G2781 Papaver somniferum
PSO384G3113 Papaver somniferum
PSO541G2909 Papaver somniferum
PSO675G0370 Papaver somniferum
QL03p068245 Quercus lobata
QL06p042406 Quercus lobata
RcHm_v2.0_Chr2g0104951 Rosa chinensis
Rhsim06G0046200 Rhododendron simsii
Rhsim08G0102500 Rhododendron simsii
Sc03g0001380 Simmondsia chinensis
Sc03g0001390 Simmondsia chinensis
Sed0026779 Sechium edule
SEGI_16709 Sequoiadendron giganteum
SGA_v2.0_scaffold15G07257 Striga asiatica
SMO270G0094 Selaginella moellendorffii
Solyc02g065080.3 Solanum lycopersicum
Sopen02g015240 Solanum pennellii
Sp5g11680 Schrenkiella parvula
TAR381G0032 Trochodendron aralioides
TAR623G0596 Trochodendron aralioides
TAR625G0854 Trochodendron aralioides
TAR633G2013 Trochodendron aralioides
THA.LOC104821269 Tarenaya hassleriana
THA.LOC104826890 Tarenaya hassleriana
Thecc.01G051900 Theobroma cacao
Thhalv10010687m.g Eutrema salsugineum
Thhalv10015526m.g Eutrema salsugineum
TPR.G15258 Trifolium pratense
TPR.G19013 Trifolium pratense
TPR.G19019 Trifolium pratense
TWI53G0684 Tripterygium wilfordii
TWI53G2069 Tripterygium wilfordii
TWI73G1210 Tripterygium wilfordii
unitig_736.g22659 Utricularia gibba
vmacro17931 Vaccinium macrocarpon
VMungo0251G0334 Vigna mungo
VMungo0251G3329 Vigna mungo
Zm00001eb038230 Zea mays
Zm00001eb196320 Zea mays

User provided reference genes

Program Settings