Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p64060 Brassica napus
A06p33510 Brassica napus
A07p03040 Brassica napus
A07p17670 Brassica napus
A09p10120 Brassica napus
Aa31LG1G14720 Aethionema arabicum
Aa31LG8G15090 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3919 Anthoceros agrestis
Actinidia17443 Actinidia chinensis
Actinidia22975 Actinidia chinensis
Ah.03g148790 Amaranthus hybridus
AL3G50930 Arabidopsis lyrata
AL7G14970 Arabidopsis lyrata
AL8G45320 Arabidopsis lyrata
Aqoxy4G02319 Aquilegia oxysepala
Aqoxy5G01788 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2EIF5S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D2U3E6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I66G12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P2RW1V Arachis hypogaea
AT2G17890 Arabidopsis thaliana
AT4G36070 Arabidopsis thaliana
AT5G66210 Arabidopsis thaliana
ATR0810G287 Amborella trichopoda
Atru.chr3.802 Acer truncatum
AUR62003366 Chenopodium quinoa
AUR62029467 Chenopodium quinoa
BcaB02g10045 Brassica carinata
BcaB03g16566 Brassica carinata
BcaB08g34775 Brassica carinata
BcaC01g02878 Brassica carinata
BcaC06g34685 Brassica carinata
BcaC06g36339 Brassica carinata
BcaNung03020 Brassica carinata
BolC3t18142H Brassica oleracea
BolC7t40915H Brassica oleracea
BolC7t43082H Brassica oleracea
BolC7t46576H Brassica oleracea
BolC9t54087H Brassica oleracea
BraA03t15472Z Brassica rapa
BraA06t26286Z Brassica rapa
BraA07t28101Z Brassica rapa
BraA07t29489Z Brassica rapa
BraA09t36655Z Brassica rapa
C03p58830 Brassica napus
C07p05190 Brassica napus
C07p25630 Brassica napus
C07p61520 Brassica napus
C09p11990 Brassica napus
CAN.G1274.4 Capsicum annuum
CAN.G1735.4 Capsicum annuum
CANSAT01G1237 Cannabis sativa
CARHR108390 Cardamine hirsuta
CARHR244470 Cardamine hirsuta
CARHR281520 Cardamine hirsuta
Carub.0003s3204 Capsella rubella
Carub.0007s0416 Capsella rubella
Carub.0008s2829 Capsella rubella
Ca_25822_v3 Cicer arietinum L.
CBR_g20445 Chara braunii
Cc07_g10750 Coffea canephora
CDE02G1274 Ceratophyllum demersum
CDE04G3572 Ceratophyllum demersum
CDE06G1004 Ceratophyllum demersum
CDE08G0257 Ceratophyllum demersum
Cfa006974 Carpinus fangiana
Ciclev10025251m.g Citrus clementina
CiPaw.07G058700 Carya illinoinensis
CiPaw.08G131500 Carya illinoinensis
ClCG01G020310 Citrullus lanatus
COL.COLO4_21905 Corchorus olitorius
Cpa.g.sc6.254 Carica papaya
CsaV3_6G047100 Cucumis sativus L.
CSS0008031 Camellia sinensis var. sinensis
CSS0025544 Camellia sinensis var. sinensis
DCAR_016603 Daucus carota
DCAR_021501 Daucus carota
DCAR_025999 Daucus carota
Dinv33629 Davidia involucrata
Dinv40089 Davidia involucrata
Duzib147G0706 Durio zibethinus
Duzib264G0880 Durio zibethinus
ECA232G3850 Erigeron canadensis
ECA246G0589 Erigeron canadensis
Eucgr.I02347 Eucalyptus grandis
Eucgr.J02432 Eucalyptus grandis
FAN23G0803 Fragaria x ananassa
FAN26G2412 Fragaria x ananassa
FAN28G1900 Fragaria x ananassa
FvH4_1g11780 Fragaria vesca
Glyma.01G166100 Glycine max
Glyma.02G048300 Glycine max
Glyma.11G077300 Glycine max
Glyma.16G128600 Glycine max
Gohir.A02G170800 Gossypium hirsutum
Gohir.A10G098600 Gossypium hirsutum
Gohir.A11G175200 Gossypium hirsutum
Gohir.D03G009300 Gossypium hirsutum
Gohir.D10G089400 Gossypium hirsutum
Gohir.D11G182700 Gossypium hirsutum
Gorai.003G009500 Gossypium raimondii
Gorai.007G194500 Gossypium raimondii
Gorai.011G098300 Gossypium raimondii
GSVIVG01018778001 Vitis vinifera
HanXRQChr03g0068541 Helianthus annuus
HanXRQChr09g0256721 Helianthus annuus
HanXRQChr13g0414651 Helianthus annuus
HanXRQChr16g0531441 Helianthus annuus
Haze_03761 Corylus avellana
Hma1.2p1_0258F.1_g104110 Hydrangea macrophylla
Hma1.2p1_0956F.1_g241280 Hydrangea macrophylla
HPP92_007138 Vanilla planifolia
HPP92_007140 Vanilla planifolia
Hund16492 Selenicereus undatus
Lalb_Chr05g0212391 Lupinus albus
Lalb_Chr16g0377501 Lupinus albus
Lj2A468T72 Lonicera japonica
Lj2g0005052 Lotus japonicus
Lj4A218G43 Lonicera japonica
Lj4g0009080 Lotus japonicus
Lsat_1_v5_gn_2_75980 Lactuca sativa
Lsat_1_v5_gn_3_72700 Lactuca sativa
Lsat_1_v5_gn_4_144881 Lactuca sativa
Manes.01G145800 Manihot esculenta
Manes.02G104800 Manihot esculenta
Mapoly0098s0040 Marchantia polymorpha
MBI05_g33717_MAGBIO Magnolia biondii
MBI09_g17619_MAGBIO Magnolia biondii
MD02G1132100 Malus domestica
MD15G1245400 Malus domestica
Medtr5g022030 Medicago truncatula
MELO3C007904.2 Cucumis melo
Migut.H01152 Erythranthe guttata
Migut.L00702 Erythranthe guttata
MSTRG.23409 Avicennia marina
MSTRG.2715 Avicennia marina
Nitab4.5_0000438g0070 Nicotiana tabacum
Nitab4.5_0000864g0060 Nicotiana tabacum
Nitab4.5_0003290g0010 Nicotiana tabacum
Nitab4.5_0006119g0050 Nicotiana tabacum
Nn1g05898 Nelumbo nucifera
Nn5g30141 Nelumbo nucifera
Oeu035310.1 Olea europaea
Os02g0126400 Oryza sativa ssp. japonica
Os07g0409900 Oryza sativa ssp. japonica
Peaxi162Scf00050g00214 Petunia axillaris
Peaxi162Scf00328g01215 Petunia axillaris
PGR102G2422 Punica granatum
PGR119G1420 Punica granatum
PGSC0003DMG400003564 Solanum tuberosum
PGSC0003DMG400022562 Solanum tuberosum
Phvul.002G108700 Phaseolus vulgaris
Phvul.003G261700 Phaseolus vulgaris
Potri.005G113600 Populus trichocarpa
Potri.007G057600 Populus trichocarpa
Pp3c15_3590 Physcomitrium patens
Pp3c15_5120 Physcomitrium patens
Pp3c9_4620 Physcomitrium patens
Pp3c9_5860 Physcomitrium patens
Prupe.7G168400 Prunus persica
Psat2g154520 Pisum sativum
PSO170G2305 Papaver somniferum
PSO541G0981 Papaver somniferum
PSO675G8786 Papaver somniferum
PSO700G0204 Papaver somniferum
QL06p032852 Quercus lobata
RcHm_v2.0_Chr2g0099401 Rosa chinensis
Rhsim10G0212000 Rhododendron simsii
Sabra05G0093100 Salix brachista
Sabra07G0049400 Salix brachista
Sc03g0003580 Simmondsia chinensis
Sc07g0000990 Simmondsia chinensis
Sed0016569 Sechium edule
Sed0022958 Sechium edule
SEGI_11028 Sequoiadendron giganteum
SGA_v2.0_scaffold76G25137 Striga asiatica
SGA_v2.0_scaffold78G25380 Striga asiatica
SMO116G0195 Selaginella moellendorffii
SMO367G0852 Selaginella moellendorffii
Solyc02g083850.3 Solanum lycopersicum
Solyc03g033540.3 Solanum lycopersicum
Sopen02g028640 Solanum pennellii
Sopen03g006320 Solanum pennellii
Sp2g30480 Schrenkiella parvula
Sp7g33850 Schrenkiella parvula
SpUn0281_0010 Schrenkiella parvula
TAR376G1140 Trochodendron aralioides
TAR381G0475 Trochodendron aralioides
TAR625G0464 Trochodendron aralioides
TAR628G0504 Trochodendron aralioides
THA.LOC104804263 Tarenaya hassleriana
THA.LOC104819177 Tarenaya hassleriana
THA.LOC104819747 Tarenaya hassleriana
THA.LOC104821328 Tarenaya hassleriana
THA.LOC104826575 Tarenaya hassleriana
Thecc.01G018400 Theobroma cacao
Thhalv10003969m.g Eutrema salsugineum
Thhalv10022615m.g Eutrema salsugineum
Thhalv10027243m.g Eutrema salsugineum
TPR.G18198 Trifolium pratense
TWI09G1210 Tripterygium wilfordii
TWI73G0205 Tripterygium wilfordii
unitig_52.g17253 Utricularia gibba
unitig_899.g14714 Utricularia gibba
vmacro18412 Vaccinium macrocarpon
vmacro22133 Vaccinium macrocarpon
VMungo0251G1476 Vigna mungo
VMungo1215G1389 Vigna mungo
Zm00001eb094770 Zea mays
Zm00001eb230910 Zea mays

User provided reference genes

Program Settings