Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p28690 Brassica napus
A08p34100 Brassica napus
A09p18050 Brassica napus
Aa31LG1G4690 Aethionema arabicum
Aa31LG2G10560 Aethionema arabicum
Actinidia08246 Actinidia chinensis
Actinidia22697 Actinidia chinensis
Ah.05g167090 Amaranthus hybridus
AL2G17480 Arabidopsis lyrata
Aqoxy5G00860 Aquilegia oxysepala
Aqoxy5G00861 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.503EJA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L3I3WK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TP4UKQ Arachis hypogaea
AT1G10220 Arabidopsis thaliana
AT1G59590 Arabidopsis thaliana
ATR0739G137 Amborella trichopoda
Atru.chr13.836 Acer truncatum
AUR62022478 Chenopodium quinoa
AUR62022481 Chenopodium quinoa
AUR62037413 Chenopodium quinoa
BcaB04g20215 Brassica carinata
BcaB07g31168 Brassica carinata
BcaC02g10643 Brassica carinata
BcaC04g22171 Brassica carinata
BcaC05g24910 Brassica carinata
BcaC06g31788 Brassica carinata
BcaC07g38543 Brassica carinata
BolC1t03591H Brassica oleracea
BolC4t24191H Brassica oleracea
BolC5t29586H Brassica oleracea
BolC8t48987H Brassica oleracea
BolC9t55167H Brassica oleracea
BraA01t03034Z Brassica rapa
BraA06t23902Z Brassica rapa
BraA08t35322Z Brassica rapa
BraA09t37437Z Brassica rapa
C01p36330 Brassica napus
C04p26130 Brassica napus
C08p13520 Brassica napus
C09p22500 Brassica napus
CAN.G724.28 Capsicum annuum
CANSAT25G2311 Cannabis sativa
CARHR010340 Cardamine hirsuta
CARHR283800 Cardamine hirsuta
Carub.0001s0962 Capsella rubella
Carub.0002s0586 Capsella rubella
Cc10_g04990 Coffea canephora
CDE02G4164 Ceratophyllum demersum
CDE04G1299 Ceratophyllum demersum
Cfa013774 Carpinus fangiana
Ciclev10002231m.g Citrus clementina
CiPaw.07G174500 Carya illinoinensis
CiPaw.08G050400 Carya illinoinensis
ClCG05G020620 Citrullus lanatus
COL.COLO4_07066 Corchorus olitorius
COL.COLO4_28502 Corchorus olitorius
Cpa.g.sc142.29 Carica papaya
CsaV3_4G035060 Cucumis sativus L.
CSS0025102 Camellia sinensis var. sinensis
CSS0044747 Camellia sinensis var. sinensis
CSS0046043 Camellia sinensis var. sinensis
DCAR_008857 Daucus carota
DCAR_012817 Daucus carota
DCAR_020050 Daucus carota
DCAR_020051 Daucus carota
Dinv44952 Davidia involucrata
Duzib041G0425 Durio zibethinus
Duzib093G1075 Durio zibethinus
EL10Ac1g02375 Beta vulgaris
Eucgr.F00084 Eucalyptus grandis
Eucgr.F02249 Eucalyptus grandis
FAN01G3110 Fragaria x ananassa
FAN03G2845 Fragaria x ananassa
FAN06G1275 Fragaria x ananassa
FAN06G3692 Fragaria x ananassa
FAN10G2701 Fragaria x ananassa
FAN15G3410 Fragaria x ananassa
FAN20G2529 Fragaria x ananassa
FAN24G0457 Fragaria x ananassa
FAN27G3264 Fragaria x ananassa
FvH4_2g33050 Fragaria vesca
FvH4_7g23760 Fragaria vesca
Glyma.04G046000 Glycine max
Glyma.06G046800 Glycine max
Glyma.14G089021 Glycine max
Glyma.17G234800 Glycine max
Gohir.A02G080900 Gossypium hirsutum
Gohir.A06G024200 Gossypium hirsutum
Gohir.A13G096700 Gossypium hirsutum
Gohir.D02G088600 Gossypium hirsutum
Gohir.D06G021300 Gossypium hirsutum
Gohir.D13G101800 Gossypium hirsutum
Gorai.005G099300 Gossypium raimondii
Gorai.010G025900 Gossypium raimondii
Gorai.013G114000 Gossypium raimondii
HanXRQChr02g0039181 Helianthus annuus
HanXRQChr04g0102441 Helianthus annuus
HanXRQChr05g0150961 Helianthus annuus
HanXRQChr09g0266811 Helianthus annuus
HanXRQChr12g0369291 Helianthus annuus
Haze_22432 Corylus avellana
Hma1.2p1_0210F.1_g089450 Hydrangea macrophylla
Hma1.2p1_3174F.1_g333610 Hydrangea macrophylla
HPP92_006072 Vanilla planifolia
HPP92_006077 Vanilla planifolia
HPP92_023657 Vanilla planifolia
Lalb_Chr11g0062891 Lupinus albus
Lalb_Chr14g0368171 Lupinus albus
Lalb_Chr22g0355661 Lupinus albus
Lj1g0007382 Lotus japonicus
Lj4C71T11 Lonicera japonica
Lj5g0017072 Lotus japonicus
Lsat_1_v5_gn_1_24481 Lactuca sativa
Lsat_1_v5_gn_4_132700 Lactuca sativa
Lsat_1_v5_gn_6_110941 Lactuca sativa
Manes.05G182200 Manihot esculenta
Manes.18G046800 Manihot esculenta
MBI16_g23892_MAGBIO Magnolia biondii
MD01G1144800 Malus domestica
MD07G1211400 Malus domestica
MD08G1082000 Malus domestica
MD15G1068500 Malus domestica
Medtr1g017990 Medicago truncatula
Medtr3g103190 Medicago truncatula
MELO3C016821.2 Cucumis melo
Migut.C00484 Erythranthe guttata
Migut.N02784 Erythranthe guttata
MSTRG.1025 Avicennia marina
MSTRG.25035 Avicennia marina
Nitab4.5_0000800g0090 Nicotiana tabacum
Nitab4.5_0002314g0080 Nicotiana tabacum
Nitab4.5_0002484g0080 Nicotiana tabacum
Nitab4.5_0004654g0010 Nicotiana tabacum
Nitab4.5_0007031g0010 Nicotiana tabacum
Nitab4.5_0008551g0010 Nicotiana tabacum
Nn1g04545 Nelumbo nucifera
Nn5g30605 Nelumbo nucifera
Oeu016577.1 Olea europaea
Oeu037484.1 Olea europaea
Oeu038172.1 Olea europaea
Oeu053615.1 Olea europaea
Oeu053619.1 Olea europaea
Oeu053620.1 Olea europaea
Os03g0432000 Oryza sativa ssp. japonica
Os07g0585900 Oryza sativa ssp. japonica
Peaxi162Scf00081g00214 Petunia axillaris
Peaxi162Scf00160g00052 Petunia axillaris
Peaxi162Scf00551g00011 Petunia axillaris
PGR031G0890 Punica granatum
PGR083G0104 Punica granatum
PGSC0003DMG400010618 Solanum tuberosum
PGSC0003DMG400011565 Solanum tuberosum
Phvul.001G028100 Phaseolus vulgaris
Phvul.009G072000 Phaseolus vulgaris
Potri.002G118200 Populus trichocarpa
Potri.014G015800 Populus trichocarpa
Prupe.1G422400 Prunus persica
Prupe.2G244200 Prunus persica
Psat5g038040 Pisum sativum
Psat6g018120 Pisum sativum
PSO541G1417 Papaver somniferum
PSO541G4649 Papaver somniferum
PSO675G3363 Papaver somniferum
QL12p038149 Quercus lobata
RcHm_v2.0_Chr1g0369071 Rosa chinensis
RcHm_v2.0_Chr6g0309661 Rosa chinensis
Rhsim06G0062500 Rhododendron simsii
Rhsim07G0219700 Rhododendron simsii
Sabra02G0092800 Salix brachista
Sabra14G0009700 Salix brachista
SalBow2G2343 Salvia bowleyana
SalBow7G2612 Salvia bowleyana
SalBow7G3048 Salvia bowleyana
SalBow7G3247 Salvia bowleyana
SalBow7G4798 Salvia bowleyana
SalBow8G3558 Salvia bowleyana
Sc02g0007900 Simmondsia chinensis
Sc02g0007910 Simmondsia chinensis
Sc24g0002380 Simmondsia chinensis
Sed0008207 Sechium edule
Sed0011240 Sechium edule
SGA_v2.0_scaffold238G43958 Striga asiatica
Solyc04g077810.1 Solanum lycopersicum
Solyc12g088330.1 Solanum lycopersicum
Sopen04g031410 Solanum pennellii
Sp1g08830 Schrenkiella parvula
Sp2g04990 Schrenkiella parvula
TAR381G0972 Trochodendron aralioides
TAR625G1300 Trochodendron aralioides
THA.LOC104816757 Tarenaya hassleriana
THA.LOC104819897 Tarenaya hassleriana
Thecc.05G238800 Theobroma cacao
Thecc.08G088400 Theobroma cacao
Thhalv10008760m.g Eutrema salsugineum
Thhalv10024035m.g Eutrema salsugineum
TPR.G33672 Trifolium pratense
TPR.G37725 Trifolium pratense
TWI12G0431 Tripterygium wilfordii
TWI56G0432 Tripterygium wilfordii
unitig_578.g16150 Utricularia gibba
unitig_8.g4877 Utricularia gibba
unitig_8.g4878 Utricularia gibba
unitig_8.g5044 Utricularia gibba
vmacro22051 Vaccinium macrocarpon
VMungo0464G1205 Vigna mungo
VMungo0647G2568 Vigna mungo
VMungo1215G2264 Vigna mungo
VMungo1309G1277 Vigna mungo
Zm00001eb020900 Zea mays
Zm00001eb108040 Zea mays
Zm00001eb325890 Zea mays

User provided reference genes

Program Settings