Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p20490 Brassica napus
A06p16500 Brassica napus
A07p15660 Brassica napus
A07p15770 Brassica napus
A07p28600 Brassica napus
Aa31LG7G4760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3603 Anthoceros agrestis
Actinidia12120 Actinidia chinensis
Actinidia15481 Actinidia chinensis
Actinidia36555 Actinidia chinensis
Actinidia37965 Actinidia chinensis
Ah.00g000460 Amaranthus hybridus
AL2G36250 Arabidopsis lyrata
Aqoxy5G01058 Aquilegia oxysepala
Aqoxy5G01648 Aquilegia oxysepala
Aqoxy6G01093 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F5AS58 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G2HAI2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VFC9DI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WI3JHU Arachis hypogaea
AT1G20460 Arabidopsis thaliana
AT1G76185 Arabidopsis thaliana
ATR0733G120 Amborella trichopoda
Atru.chr3.563 Acer truncatum
BcaB02g07054 Brassica carinata
BcaB07g32048 Brassica carinata
BcaC03g15650 Brassica carinata
BcaC05g25956 Brassica carinata
BcaC08g45540 Brassica carinata
BcaC08g47113 Brassica carinata
BNapus_Darmor_BZH_scaffold_170p00030 Brassica napus
BolC2t09366H Brassica oleracea
BolC5t30606H Brassica oleracea
BolC6t38341H Brassica oleracea
BraA02t07080Z Brassica rapa
BraA06t24756Z Brassica rapa
BraA07t30501Z Brassica rapa
BraA07t31705Z Brassica rapa
C02p33350 Brassica napus
C05p19050 Brassica napus
C06p32180 Brassica napus
CAN.G208.7 Capsicum annuum
CAN.G311.99 Capsicum annuum
CAN.G358.101 Capsicum annuum
CANSAT01G1184 Cannabis sativa
CANSAT25G0014 Cannabis sativa
CARHR020910 Cardamine hirsuta
CARHR069740 Cardamine hirsuta
Carub.0001s1993 Capsella rubella
Carub.0002s2308 Capsella rubella
Cc07_g09430 Coffea canephora
Cc10_g00860 Coffea canephora
CDE02G2075 Ceratophyllum demersum
CDE02G3043 Ceratophyllum demersum
CDE04G0975 Ceratophyllum demersum
CDE09G0257 Ceratophyllum demersum
Ciclev10002915m.g Citrus clementina
Ciclev10026821m.g Citrus clementina
CiPaw.02G016600 Carya illinoinensis
CiPaw.07G140700 Carya illinoinensis
CiPaw.08G071600 Carya illinoinensis
ClCG00G002880 Citrullus lanatus
ClCG08G009600 Citrullus lanatus
COL.COLO4_21608 Corchorus olitorius
Cpa.g.sc26.223 Carica papaya
CsaV3_6G031700 Cucumis sativus L.
CSS0031108 Camellia sinensis var. sinensis
CSS0034652 Camellia sinensis var. sinensis
Dinv26826 Davidia involucrata
Dinv31919 Davidia involucrata
Dinv39576 Davidia involucrata
Dinv39975 Davidia involucrata
Duzib041G0372 Durio zibethinus
Duzib093G1967 Durio zibethinus
Duzib116G0672 Durio zibethinus
ECA233G0660 Erigeron canadensis
ECA246G3301 Erigeron canadensis
EL10Ac1g02011 Beta vulgaris
Eucgr.F03542 Eucalyptus grandis
Eucgr.I02454 Eucalyptus grandis
FAN15G0717 Fragaria x ananassa
FAN20G3055 Fragaria x ananassa
FAN27G0038 Fragaria x ananassa
FvH4_2g37670 Fragaria vesca
Glyma.01G175400 Glycine max
Glyma.04G019300 Glycine max
Glyma.06G019600 Glycine max
Glyma.11G067600 Glycine max
Gohir.A02G083600 Gossypium hirsutum
Gohir.A05G180900 Gossypium hirsutum
Gohir.A05G254800 Gossypium hirsutum
Gohir.A10G095000 Gossypium hirsutum
Gohir.A12G065000 Gossypium hirsutum
Gohir.D02G099100 Gossypium hirsutum
Gohir.D05G183900 Gossypium hirsutum
Gohir.D05G256400 Gossypium hirsutum
Gohir.D10G092900 Gossypium hirsutum
Gohir.D12G065100 Gossypium hirsutum
Gorai.005G112900 Gossypium raimondii
Gorai.008G068300 Gossypium raimondii
Gorai.009G189400 Gossypium raimondii
Gorai.009G267900 Gossypium raimondii
Gorai.011G102100 Gossypium raimondii
GSVIVG01008697001 Vitis vinifera
GSVIVG01018978001 Vitis vinifera
HanXRQChr12g0366591 Helianthus annuus
HanXRQChr14g0428701 Helianthus annuus
HanXRQChr15g0482261 Helianthus annuus
Hma1.2p1_0717F.1_g208130 Hydrangea macrophylla
Hma1.2p1_1260F.1_g271060 Hydrangea macrophylla
Hund05127 Selenicereus undatus
Lalb_Chr01g0008381 Lupinus albus
Lalb_Chr08g0246351 Lupinus albus
Lalb_Chr09g0322471 Lupinus albus
Lalb_Chr11g0061721 Lupinus albus
Lalb_Chr19g0131711 Lupinus albus
Lj1g0024220 Lotus japonicus
Lj4g0023984 Lotus japonicus
Lsat_1_v5_gn_3_77600 Lactuca sativa
Lsat_1_v5_gn_5_39760 Lactuca sativa
Lsat_1_v5_gn_8_27741 Lactuca sativa
Manes.01G134700 Manihot esculenta
Manes.02G093000 Manihot esculenta
Manes.05G140300 Manihot esculenta
Manes.18G007200 Manihot esculenta
Mapoly0075s0049 Marchantia polymorpha
MBI05_g27809_MAGBIO Magnolia biondii
MD08G1004300 Malus domestica
MD15G1003700 Malus domestica
Medtr3g115080 Medicago truncatula
MELO3C026549.2 Cucumis melo
Migut.C00924 Erythranthe guttata
Migut.H00998 Erythranthe guttata
Migut.L00515 Erythranthe guttata
Migut.N03196 Erythranthe guttata
MSTRG.1123 Avicennia marina
MSTRG.22360 Avicennia marina
MSTRG.23532 Avicennia marina
MSTRG.25294 Avicennia marina
Nitab4.5_0000337g0170 Nicotiana tabacum
Nitab4.5_0000588g0270 Nicotiana tabacum
Nitab4.5_0000699g0170 Nicotiana tabacum
Nitab4.5_0002710g0120 Nicotiana tabacum
Nitab4.5_0007869g0020 Nicotiana tabacum
Nn1g05018 Nelumbo nucifera
Nn1g05766 Nelumbo nucifera
Nn5g29580 Nelumbo nucifera
Nn6g31830 Nelumbo nucifera
Oeu011320.1 Olea europaea
Os03g0227500 Oryza sativa ssp. japonica
Os03g0669600 Oryza sativa ssp. japonica
Peaxi162Scf00064g01012 Petunia axillaris
Peaxi162Scf00400g00314 Petunia axillaris
Peaxi162Scf00515g00521 Petunia axillaris
Peaxi162Scf01481g00038 Petunia axillaris
PGR031G2527 Punica granatum
PGSC0003DMG400029411 Solanum tuberosum
PGSC0003DMG401009896 Solanum tuberosum
Phvul.002G029601 Phaseolus vulgaris
Phvul.009G021200 Phaseolus vulgaris
Potri.002G013000 Populus trichocarpa
Potri.005G248300 Populus trichocarpa
Potri.007G026601 Populus trichocarpa
Prupe.1G356200 Prunus persica
Psat0s3811g0040 Pisum sativum
Psat4g092120 Pisum sativum
PSO170G0681 Papaver somniferum
PSO210G7820 Papaver somniferum
QL02p013773 Quercus lobata
QL06p045796 Quercus lobata
RcHm_v2.0_Chr6g0304061 Rosa chinensis
Rhsim06G0008900 Rhododendron simsii
Rhsim07G0254000 Rhododendron simsii
Sabra02G0010200 Salix brachista
Sabra05G0191800 Salix brachista
SalBow6G3231 Salvia bowleyana
Sc02g0009000 Simmondsia chinensis
Sed0012631 Sechium edule
Sed0016414 Sechium edule
SEGI_02230 Sequoiadendron giganteum
SEGI_11040 Sequoiadendron giganteum
SGA_v2.0_scaffold19G08601 Striga asiatica
SGA_v2.0_scaffold275G46578 Striga asiatica
SGA_v2.0_scaffold276G46636 Striga asiatica
SHI08007 Sapria himalayana
Solyc04g082210.3 Solanum lycopersicum
Solyc12g094510.2 Solanum lycopersicum
Sopen02g030060 Solanum pennellii
Sopen04g035840 Solanum pennellii
Sopen12g031400 Solanum pennellii
Sp1g18170 Schrenkiella parvula
Sp5g31330 Schrenkiella parvula
TAR376G0434 Trochodendron aralioides
TAR381G0421 Trochodendron aralioides
TAR625G0832 Trochodendron aralioides
TAR628G0584 Trochodendron aralioides
THA.LOC104809745 Tarenaya hassleriana
THA.LOC104813762 Tarenaya hassleriana
Thecc.01G037000 Theobroma cacao
Thecc.08G055600 Theobroma cacao
Thhalv10009165m.g Eutrema salsugineum
Thhalv10019348m.g Eutrema salsugineum
TPR.G34985 Trifolium pratense
TPR.G38123 Trifolium pratense
TWI12G0861 Tripterygium wilfordii
unitig_21.g20148 Utricularia gibba
unitig_21.g20955 Utricularia gibba
unitig_744.g24608 Utricularia gibba
vmacro04393 Vaccinium macrocarpon
vmacro21831 Vaccinium macrocarpon
VMungo1309G2978 Vigna mungo
Zm00001eb009770 Zea mays

User provided reference genes

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