Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p48470 Brassica napus
A09p44880 Brassica napus
Aa31LG5G11660 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1874 Anthoceros agrestis
Actinidia11523 Actinidia chinensis
Actinidia20784 Actinidia chinensis
Actinidia32558 Actinidia chinensis
Ah.15g090210 Amaranthus hybridus
AL5G32190 Arabidopsis lyrata
AL6G10230 Arabidopsis lyrata
Aqoxy2G00741 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.DF4ABA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J7KKGP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U3MJA7 Arachis hypogaea
AT3G27185 Arabidopsis thaliana
AT3G51730 Arabidopsis thaliana
AT5G01800 Arabidopsis thaliana
ATR0681G065 Amborella trichopoda
ATR0752G144 Amborella trichopoda
Atru.chr8.2374 Acer truncatum
AUR62006354 Chenopodium quinoa
AUR62029684 Chenopodium quinoa
BcaB01g00423 Brassica carinata
BcaB01g00424 Brassica carinata
BcaB01g00484 Brassica carinata
BcaC01g05777 Brassica carinata
BcaC06g31953 Brassica carinata
BcaC06g33004 Brassica carinata
BcaC06g33346 Brassica carinata
BcaNung03300 Brassica carinata
BcaNung03305 Brassica carinata
BolC3t14632H Brassica oleracea
BolC7t45172H Brassica oleracea
BolC8t50313H Brassica oleracea
BolC9t60205H Brassica oleracea
BraA03t13952Z Brassica rapa
BraA09t39949Z Brassica rapa
C07p46560 Brassica napus
C08p26930 Brassica napus
C09p74730 Brassica napus
CAN.G484.75 Capsicum annuum
CAN.G738.7 Capsicum annuum
CANSAT35G1279 Cannabis sativa
CARHR161360 Cardamine hirsuta
CARHR229670 Cardamine hirsuta
Carub.0005s1807 Capsella rubella
Carub.0006s0003 Capsella rubella
Ca_07748_v3 Cicer arietinum L.
Ca_19773_v3 Cicer arietinum L.
CBR_g3540 Chara braunii
Cc06_g00540 Coffea canephora
CDE04G1276 Ceratophyllum demersum
CDE05G1998 Ceratophyllum demersum
CiPaw.09G218500 Carya illinoinensis
CiPaw.09G218600 Carya illinoinensis
CiPaw.09G218700 Carya illinoinensis
CiPaw.10G164000 Carya illinoinensis
ClCG04G006470 Citrullus lanatus
COL.COLO4_30004 Corchorus olitorius
Cpa.g.sc86.26 Carica papaya
CsaV3_4G027050 Cucumis sativus L.
CsaV3_UNG105770 Cucumis sativus L.
CSS0024307 Camellia sinensis var. sinensis
CSS0038239 Camellia sinensis var. sinensis
CSS0043268 Camellia sinensis var. sinensis
DCAR_010960 Daucus carota
DCAR_018655 Daucus carota
Dinv11389 Davidia involucrata
Dinv11390 Davidia involucrata
Dinv25315 Davidia involucrata
Duzib151G0339 Durio zibethinus
Duzib212G0732 Durio zibethinus
Duzib268G0086 Durio zibethinus
ECA247G0333 Erigeron canadensis
EL10Ac7g17057 Beta vulgaris
Eucgr.A00687 Eucalyptus grandis
Eucgr.K01273 Eucalyptus grandis
FAN02G3784 Fragaria x ananassa
FAN05G4057 Fragaria x ananassa
FAN05G5303 Fragaria x ananassa
FAN09G3749 Fragaria x ananassa
FAN14G1450 Fragaria x ananassa
FvH4_6g10220 Fragaria vesca
Glyma.01G131400 Glycine max
Glyma.09G277100 Glycine max
Glyma.09G277200 Glycine max
Glyma.18G211900 Glycine max
Glyma.18G212100 Glycine max
Glyma.19G111400 Glycine max
Glyma.19G111500 Glycine max
Gohir.A02G004800 Gossypium hirsutum
Gohir.A10G149300 Gossypium hirsutum
Gohir.D02G005100 Gossypium hirsutum
Gohir.D10G117500 Gossypium hirsutum
Gorai.005G005800 Gossypium raimondii
Gorai.011G129400 Gossypium raimondii
GSVIVG01030214001 Vitis vinifera
GSVIVG01030215001 Vitis vinifera
HanXRQChr10g0286291 Helianthus annuus
Haze_21140 Corylus avellana
Haze_21146 Corylus avellana
Hma1.2p1_0118F.1_g056550 Hydrangea macrophylla
Hma1.2p1_0174F.1_g077000 Hydrangea macrophylla
HPP92_000845 Vanilla planifolia
HPP92_001774 Vanilla planifolia
HPP92_011015 Vanilla planifolia
HPP92_011979 Vanilla planifolia
HPP92_011987 Vanilla planifolia
HPP92_013825 Vanilla planifolia
HPP92_013871 Vanilla planifolia
HPP92_016682 Vanilla planifolia
Hund03784 Selenicereus undatus
Hund19801 Selenicereus undatus
Lalb_Chr04g0259291 Lupinus albus
Lalb_Chr12g0207581 Lupinus albus
Lalb_Chr13g0291881 Lupinus albus
Lj1g0017699 Lotus japonicus
Lj2A62T70 Lonicera japonica
Lj3A942T86 Lonicera japonica
Lj3g0009835 Lotus japonicus
Lsat_1_v5_gn_9_38061 Lactuca sativa
Manes.08G173200 Manihot esculenta
Manes.09G115700 Manihot esculenta
Mapoly0043s0129 Marchantia polymorpha
MBI02_g35825_MAGBIO Magnolia biondii
MBI15_g26245_MAGBIO Magnolia biondii
MBI15_g27350_MAGBIO Magnolia biondii
MD04G1171500 Malus domestica
MD12G1184900 Malus domestica
Medtr4g029040 Medicago truncatula
Medtr7g072560 Medicago truncatula
MELO3C026054.2 Cucumis melo
Migut.J00062 Erythranthe guttata
MSTRG.18957 Avicennia marina
Nitab4.5_0000126g0040 Nicotiana tabacum
Nitab4.5_0000381g0010 Nicotiana tabacum
Nitab4.5_0009418g0020 Nicotiana tabacum
Nitab4.5_0010742g0010 Nicotiana tabacum
Nn2g11100 Nelumbo nucifera
Nn2g13337 Nelumbo nucifera
Nn7g38233 Nelumbo nucifera
Oeu060447.2 Olea europaea
Oeu064875.2 Olea europaea
Os01g0166700 Oryza sativa ssp. japonica
Os05g0335100 Oryza sativa ssp. japonica
Os11g0112800 Oryza sativa ssp. japonica
Os12g0112200 Oryza sativa ssp. japonica
Peaxi162Scf00009g00811 Petunia axillaris
Peaxi162Scf00732g00449 Petunia axillaris
PGR004G2314 Punica granatum
PGR004G2520 Punica granatum
PGR031G1876 Punica granatum
PGSC0003DMG400026572 Solanum tuberosum
Phvul.008G084700 Phaseolus vulgaris
Phvul.008G084800 Phaseolus vulgaris
Phvul.010G067500 Phaseolus vulgaris
Potri.006G107300 Populus trichocarpa
Potri.016G133400 Populus trichocarpa
Pp3c14_24360 Physcomitrium patens
Pp3c17_22230 Physcomitrium patens
PRCOL_00006315 Prasinoderma coloniale
Prupe.6G290000 Prunus persica
Psat3g120560 Pisum sativum
Psat7g230080 Pisum sativum
PSO339G4844 Papaver somniferum
PSO384G2267 Papaver somniferum
QL07p032778 Quercus lobata
RcHm_v2.0_Chr3g0460961 Rosa chinensis
Rhsim04G0122900 Rhododendron simsii
Rhsim05G0229000 Rhododendron simsii
Sc02g0000830 Simmondsia chinensis
Sed0009478 Sechium edule
Sed0026963 Sechium edule
SGA_v2.0_scaffold373G50170 Striga asiatica
SGA_v2.0_scaffold85G26650 Striga asiatica
SHI12907 Sapria himalayana
Solyc09g042700.4 Solanum lycopersicum
Solyc10g085430.3 Solanum lycopersicum
Sopen09g015490 Solanum pennellii
Sopen10g034880 Solanum pennellii
Sp5g10550 Schrenkiella parvula
Sp6g41050 Schrenkiella parvula
TAR627G0090 Trochodendron aralioides
THA.LOC104806073 Tarenaya hassleriana
THA.LOC104823315 Tarenaya hassleriana
THA.LOC104824518 Tarenaya hassleriana
Thecc.04G154900 Theobroma cacao
Thhalv10010716m.g Eutrema salsugineum
Thhalv10014673m.g Eutrema salsugineum
TPR.G4415 Trifolium pratense
TPR.G4963 Trifolium pratense
TWI53G1003 Tripterygium wilfordii
TWI74G0479 Tripterygium wilfordii
TWI77G0482 Tripterygium wilfordii
unitig_27.g24880 Utricularia gibba
unitig_699.g19371 Utricularia gibba
vmacro08930 Vaccinium macrocarpon
vmacro20356 Vaccinium macrocarpon
vmacro23407 Vaccinium macrocarpon
VMungo0331G1328 Vigna mungo
VMungo1383G1340 Vigna mungo
VMungo1383G1499 Vigna mungo
Zm00001eb035560 Zea mays
Zm00001eb100400 Zea mays
Zm00001eb123280 Zea mays
Zm00001eb146790 Zea mays
Zm00001eb163980 Zea mays
Zm00001eb167030 Zea mays
Zm00001eb168900 Zea mays
Zm00001eb318120 Zea mays
Zm00001eb350240 Zea mays
Zm00001eb406340 Zea mays
Zm00001eb423520 Zea mays

User provided reference genes

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