Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07270 Brassica napus
A04p18430 Brassica napus
A09p56460 Brassica napus
Aa31LG2G19460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4755 Anthoceros agrestis
Actinidia04302 Actinidia chinensis
Actinidia23553 Actinidia chinensis
Actinidia38321 Actinidia chinensis
Actinidia38674 Actinidia chinensis
Ah.14g078300 Amaranthus hybridus
AL4G14400 Arabidopsis lyrata
AL7G21170 Arabidopsis lyrata
AL7G21180 Arabidopsis lyrata
Aqoxy7G03400 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SQ1PL8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UX6F9Q Arachis hypogaea
AT2G24200 Arabidopsis thaliana
AT4G30910 Arabidopsis thaliana
AT4G30920 Arabidopsis thaliana
ATR0739G170 Amborella trichopoda
Atru.chr7.50 Acer truncatum
AUR62020264 Chenopodium quinoa
AUR62020265 Chenopodium quinoa
AUR62037736 Chenopodium quinoa
AUR62037737 Chenopodium quinoa
BcaC02g08495 Brassica carinata
BcaC07g40952 Brassica carinata
BcaC09g51878 Brassica carinata
BcaNung03429 Brassica carinata
BolC1t00792H Brassica oleracea
BolC4t26926H Brassica oleracea
BolC8t51518H Brassica oleracea
BraA01t00676Z Brassica rapa
BraA04t17455Z Brassica rapa
BraA09t41040Z Brassica rapa
C01p08030 Brassica napus
C04p53710 Brassica napus
C08p39440 Brassica napus
CAN.G551.43 Capsicum annuum
CANSAT11G1877 Cannabis sativa
CARHR117960 Cardamine hirsuta
CARHR238810 Cardamine hirsuta
Carub.0004s0347 Capsella rubella
Carub.0007s0963 Capsella rubella
Ca_21127_v3 Cicer arietinum L.
Ca_23181_v3 Cicer arietinum L.
CBR_g39263 Chara braunii
CBR_g39264 Chara braunii
Cc03_g13600 Coffea canephora
Cc06_g14970 Coffea canephora
CDE02G2822 Ceratophyllum demersum
CDE02G4464 Ceratophyllum demersum
CDE05G0786 Ceratophyllum demersum
CDE05G0819 Ceratophyllum demersum
Cfa020826 Carpinus fangiana
Ciclev10007834m.g Citrus clementina
CiPaw.15G168500 Carya illinoinensis
CiPaw.15G168600 Carya illinoinensis
CiPaw.15G168800 Carya illinoinensis
CiPaw.16G111100 Carya illinoinensis
ClCG00G005490 Citrullus lanatus
ClCG02G014480 Citrullus lanatus
ClCG02G014500 Citrullus lanatus
ClCG02G014510 Citrullus lanatus
COL.COLO4_18809 Corchorus olitorius
Cpa.g.sc46.155 Carica papaya
Cre01.g007700 Chlamydomonas reinhardtii
CsaV3_2G007500 Cucumis sativus L.
CsaV3_2G007510 Cucumis sativus L.
CsaV3_2G007520 Cucumis sativus L.
CSS0022569 Camellia sinensis var. sinensis
CSS0043690 Camellia sinensis var. sinensis
CSS0044446 Camellia sinensis var. sinensis
DCAR_017910 Daucus carota
Dinv41379 Davidia involucrata
Dinv42855 Davidia involucrata
Dinv43245 Davidia involucrata
Duzib168G2289 Durio zibethinus
Duzib187G1432 Durio zibethinus
ECA234G2301 Erigeron canadensis
ECA240G4770 Erigeron canadensis
EL10Ac8g18855 Beta vulgaris
Eucgr.C00345 Eucalyptus grandis
FAN23G0979 Fragaria x ananassa
FAN26G3485 Fragaria x ananassa
FAN28G0441 Fragaria x ananassa
FvH4_1g00930 Fragaria vesca
Glyma.02G204000 Glycine max
Glyma.16G098100 Glycine max
Glyma.17G073800 Glycine max
Glyma.19G077800 Glycine max
Gohir.A06G097600 Gossypium hirsutum
Gohir.A07G027000 Gossypium hirsutum
Gohir.A12G237450 Gossypium hirsutum
Gohir.A13G184000 Gossypium hirsutum
Gohir.D06G098300 Gossypium hirsutum
Gohir.D07G031000 Gossypium hirsutum
Gohir.D13G190100 Gossypium hirsutum
Gorai.001G032300 Gossypium raimondii
Gorai.010G113200 Gossypium raimondii
Gorai.013G216000 Gossypium raimondii
GSVIVG01023604001 Vitis vinifera
HanXRQChr03g0064921 Helianthus annuus
HanXRQChr09g0245791 Helianthus annuus
HanXRQChr10g0313771 Helianthus annuus
HanXRQChr12g0357561 Helianthus annuus
HanXRQChr12g0357581 Helianthus annuus
Hma1.2p1_0028F.1_g017570 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093580 Hydrangea macrophylla
HPP92_017472 Vanilla planifolia
HPP92_021986 Vanilla planifolia
Hund01515 Selenicereus undatus
Lalb_Chr11g0072681 Lupinus albus
Lalb_Chr12g0198691 Lupinus albus
Lalb_Chr13g0300861 Lupinus albus
Lalb_Chr23g0275661 Lupinus albus
Lj4g0004774 Lotus japonicus
Lj6g0000637 Lotus japonicus
Lj7A459T69 Lonicera japonica
Lsat_1_v5_gn_5_91161 Lactuca sativa
Lsat_1_v5_gn_7_49821 Lactuca sativa
Manes.06G034100 Manihot esculenta
Mapoly0174s0005 Marchantia polymorpha
MBI14_g09675_MAGBIO Magnolia biondii
MBI15_g19325_MAGBIO Magnolia biondii
MCO05G679 Micromonas commoda
MD00G1071100 Malus domestica
MD02G1007600 Malus domestica
MD15G1066200 Malus domestica
Medtr2g460740 Medicago truncatula
Medtr2g460760 Medicago truncatula
Medtr4g130860 Medicago truncatula
MELO3C004134.2 Cucumis melo
MELO3C004135.2 Cucumis melo
Migut.J01344 Erythranthe guttata
Migut.K00327 Erythranthe guttata
MSTRG.19649 Avicennia marina
MSTRG.19650 Avicennia marina
MSTRG.26273 Avicennia marina
Nitab4.5_0002315g0140 Nicotiana tabacum
Nitab4.5_0002891g0030 Nicotiana tabacum
Nn2g12377 Nelumbo nucifera
Oeu012294.1 Olea europaea
Oeu012295.1 Olea europaea
Oeu027647.1 Olea europaea
Oeu038142.1 Olea europaea
Oeu038144.2 Olea europaea
Oeu050495.1 Olea europaea
Oeu052199.1 Olea europaea
Os02g0794700 Oryza sativa ssp. japonica
Os12g0434400 Oryza sativa ssp. japonica
Peaxi162Scf00062g00230 Petunia axillaris
PGR142G0019 Punica granatum
PGSC0003DMG400007831 Solanum tuberosum
Phvul.003G156100 Phaseolus vulgaris
Phvul.009G195000 Phaseolus vulgaris
Potri.006G184500 Populus trichocarpa
Potri.018G106800 Populus trichocarpa
Pp3c10_17130 Physcomitrium patens
Pp3c18_20510 Physcomitrium patens
Pp3s30_790 Physcomitrium patens
PRCOL_00003627 Prasinoderma coloniale
Prupe.7G262900 Prunus persica
Psat0s2403g0400 Pisum sativum
Psat1g025200 Pisum sativum
PSO063G3101 Papaver somniferum
PSO561G0007 Papaver somniferum
QL02p093261 Quercus lobata
RcHm_v2.0_Chr2g0085631 Rosa chinensis
RcHm_v2.0_Chr2g0085651 Rosa chinensis
RcHm_v2.0_Chr3g0465161 Rosa chinensis
RcHm_v2.0_Chr7g0195001 Rosa chinensis
Rhsim01G0033200 Rhododendron simsii
Rhsim01G0033300 Rhododendron simsii
Rhsim03G0257100 Rhododendron simsii
RhsimUnG0158200 Rhododendron simsii
Sabra18G0091000 Salix brachista
SalBow1G0147 Salvia bowleyana
SalBow1G2794 Salvia bowleyana
Sc17g0006700 Simmondsia chinensis
Sed0010856 Sechium edule
Sed0024775 Sechium edule
Sed0024842 Sechium edule
SEGI_04136 Sequoiadendron giganteum
SEGI_16688 Sequoiadendron giganteum
SGA_v2.0_scaffold12G05994 Striga asiatica
SHI02851 Sapria himalayana
SMO364G0662 Selaginella moellendorffii
Solyc12g010020.3 Solanum lycopersicum
Solyc12g010030.3 Solanum lycopersicum
Solyc12g010040.2 Solanum lycopersicum
Sopen12g004890 Solanum pennellii
Sopen12g004910 Solanum pennellii
Sopen12g004920 Solanum pennellii
Sp4g03140 Schrenkiella parvula
Sp7g28790 Schrenkiella parvula
TAR625G1471 Trochodendron aralioides
TAR626G0628 Trochodendron aralioides
TAR636G0142 Trochodendron aralioides
THA.LOC104803561 Tarenaya hassleriana
THA.LOC104803904 Tarenaya hassleriana
Thecc.09G030700 Theobroma cacao
Thhalv10000127m.g Eutrema salsugineum
Thhalv10024754m.g Eutrema salsugineum
TPR.G24862 Trifolium pratense
TWI34G0884 Tripterygium wilfordii
unitig_746.g26562 Utricularia gibba
vmacro06083 Vaccinium macrocarpon
vmacro16801 Vaccinium macrocarpon
VMungo1215G1955 Vigna mungo
VMungo1309G1986 Vigna mungo
Zm00001eb241570 Zea mays
Zm00001eb257760 Zea mays

User provided reference genes

Program Settings