Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p06890 Brassica napus
A07p14680 Brassica napus
Aa31LG5G20110 Aethionema arabicum
Actinidia13120 Actinidia chinensis
Actinidia19757 Actinidia chinensis
AL4G36880 Arabidopsis lyrata
AL938U10010 Arabidopsis lyrata
AT2G39490 Arabidopsis thaliana
Atru.chr12.523 Acer truncatum
Atru.chr12.524 Acer truncatum
Atru.chr12.525 Acer truncatum
Atru.chr12.549 Acer truncatum
Atru.chr12.550 Acer truncatum
BcaB02g09114 Brassica carinata
BcaB06g29089 Brassica carinata
BcaC06g34938 Brassica carinata
BolC4t22426H Brassica oleracea
BolC4t28235H Brassica oleracea
BolC7t42681H Brassica oleracea
BraA05t19654Z Brassica rapa
BraA07t29211Z Brassica rapa
C04p08160 Brassica napus
C07p21570 Brassica napus
CANSAT56G4138 Cannabis sativa
CANSAT80G2335 Cannabis sativa
CARHR134360 Cardamine hirsuta
Carub.0004s2156 Capsella rubella
Ca_30311_v3 Cicer arietinum L.
Cc06_g03080 Coffea canephora
Cfa001524 Carpinus fangiana
Ciclev10033375m.g Citrus clementina
Ciclev10033483m.g Citrus clementina
Ciclev10033929m.g Citrus clementina
Ciclev10033934m.g Citrus clementina
CiPaw.01G282600 Carya illinoinensis
CiPaw.09G187700 Carya illinoinensis
ClCG07G003130 Citrullus lanatus
ClCG09G020160 Citrullus lanatus
COL.COLO4_14871 Corchorus olitorius
COL.COLO4_14872 Corchorus olitorius
COL.COLO4_14873 Corchorus olitorius
COL.COLO4_14924 Corchorus olitorius
COL.COLO4_14928 Corchorus olitorius
COL.COLO4_14929 Corchorus olitorius
COL.COLO4_14931 Corchorus olitorius
COL.COLO4_14932 Corchorus olitorius
COL.COLO4_14934 Corchorus olitorius
COL.COLO4_14935 Corchorus olitorius
COL.COLO4_14938 Corchorus olitorius
COL.COLO4_14939 Corchorus olitorius
COL.COLO4_26932 Corchorus olitorius
COL.COLO4_26933 Corchorus olitorius
COL.COLO4_26963 Corchorus olitorius
Cpa.g.sc1.352 Carica papaya
CsaV3_5G006860 Cucumis sativus L.
CsaV3_5G026300 Cucumis sativus L.
CSS0004742 Camellia sinensis var. sinensis
Dinv31419 Davidia involucrata
Dinv35647 Davidia involucrata
Dinv37214 Davidia involucrata
Dinv37215 Davidia involucrata
Duzib093G1770 Durio zibethinus
Duzib114G0229 Durio zibethinus
Duzib114G0233 Durio zibethinus
Duzib114G0412 Durio zibethinus
Duzib114G0414 Durio zibethinus
Duzib114G0435 Durio zibethinus
Duzib114G0726 Durio zibethinus
Duzib128G0244 Durio zibethinus
Duzib128G0419 Durio zibethinus
Duzib128G1376 Durio zibethinus
ECA233G3757 Erigeron canadensis
ECA233G4959 Erigeron canadensis
ECA233G5551 Erigeron canadensis
Eucgr.A01226 Eucalyptus grandis
Eucgr.A01227 Eucalyptus grandis
Eucgr.A01228 Eucalyptus grandis
FAN01G0554 Fragaria x ananassa
FAN02G3862 Fragaria x ananassa
FAN03G2136 Fragaria x ananassa
FAN05G5020 Fragaria x ananassa
FAN06G1309 Fragaria x ananassa
FAN06G2116 Fragaria x ananassa
FAN09G0289 Fragaria x ananassa
FAN10G1923 Fragaria x ananassa
FAN14G3638 Fragaria x ananassa
FvH4_6g14500 Fragaria vesca
FvH4_7g21530 Fragaria vesca
Glyma.02G094600 Glycine max
Glyma.10G290500 Glycine max
Glyma.18G286800 Glycine max
Glyma.18G286900 Glycine max
Glyma.20G098700 Glycine max
Gohir.A05G300566 Gossypium hirsutum
Gohir.A05G300600 Gossypium hirsutum
Gohir.A05G300900 Gossypium hirsutum
Gohir.A05G300966 Gossypium hirsutum
Gohir.A05G301000 Gossypium hirsutum
Gohir.A05G301133 Gossypium hirsutum
Gohir.A10G213700 Gossypium hirsutum
Gohir.A10G213733 Gossypium hirsutum
Gohir.D05G300300 Gossypium hirsutum
Gohir.D05G300333 Gossypium hirsutum
Gohir.D05G300366 Gossypium hirsutum
Gohir.D05G300600 Gossypium hirsutum
Gohir.D05G300650 Gossypium hirsutum
Gohir.D05G300700 Gossypium hirsutum
Gohir.D05G300800 Gossypium hirsutum
Gohir.D10G222800 Gossypium hirsutum
Gorai.009G317800 Gossypium raimondii
Gorai.009G318000 Gossypium raimondii
Gorai.009G318100 Gossypium raimondii
Gorai.009G318400 Gossypium raimondii
Gorai.009G318500 Gossypium raimondii
Gorai.009G318600 Gossypium raimondii
Gorai.009G318700 Gossypium raimondii
Gorai.009G318800 Gossypium raimondii
Gorai.011G253200 Gossypium raimondii
Gorai.011G253300 Gossypium raimondii
GSVIVG01016605001 Vitis vinifera
GSVIVG01016606001 Vitis vinifera
GSVIVG01016607001 Vitis vinifera
GSVIVG01016608001 Vitis vinifera
GSVIVG01016609001 Vitis vinifera
GSVIVG01016613001 Vitis vinifera
GSVIVG01025608001 Vitis vinifera
HanXRQChr12g0370641 Helianthus annuus
HanXRQChr13g0399231 Helianthus annuus
Haze_17017 Corylus avellana
Hma1.2p1_0111F.1_g053140 Hydrangea macrophylla
Hma1.2p1_0111F.1_g053145 Hydrangea macrophylla
Hma1.2p1_0192F.1_g083590 Hydrangea macrophylla
Hma1.2p1_1481F.1_g286056 Hydrangea macrophylla
Hma1.2p1_1481F.1_g286060 Hydrangea macrophylla
Lalb_Chr04g0257911 Lupinus albus
Lalb_Chr21g0307361 Lupinus albus
Lj1g0018411 Lotus japonicus
Lj1g0019421 Lotus japonicus
Lj1g0028035 Lotus japonicus
Lj2C101G9 Lonicera japonica
Lj3A972T44 Lonicera japonica
Lj3A972T46 Lonicera japonica
Lj3C972G3 Lonicera japonica
Lj5g0007270 Lotus japonicus
Lsat_1_v5_gn_6_32841 Lactuca sativa
Lsat_1_v5_gn_8_16120 Lactuca sativa
Manes.10G035100 Manihot esculenta
MD01G1122000 Malus domestica
MD04G1119300 Malus domestica
MD07G1191500 Malus domestica
Medtr1g115385 Medicago truncatula
Medtr1g115400 Medicago truncatula
Medtr7g023360 Medicago truncatula
MELO3C025465.2 Cucumis melo
MELO3C034250.2 Cucumis melo
MSTRG.19110 Avicennia marina
Nn2g12888 Nelumbo nucifera
Oeu024369.3 Olea europaea
Os02g0160200 Oryza sativa ssp. japonica
PGR004G0625 Punica granatum
PGR004G1133 Punica granatum
Phvul.007G010900 Phaseolus vulgaris
Phvul.008G014800 Phaseolus vulgaris
Potri.008G050800 Populus trichocarpa
Prupe.6G249000 Prunus persica
Psat3g184400 Pisum sativum
Psat6g236680 Pisum sativum
PSO339G4163 Papaver somniferum
QL07p046683 Quercus lobata
QL08p058711 Quercus lobata
RcHm_v2.0_Chr1g0365841 Rosa chinensis
RcHm_v2.0_Chr3g0467581 Rosa chinensis
Rhsim03G0054400 Rhododendron simsii
Rhsim04G0153300 Rhododendron simsii
Rhsim04G0153600 Rhododendron simsii
Rhsim04G0153700 Rhododendron simsii
Sabra08G0035600 Salix brachista
SalBow8G3555 Salvia bowleyana
SalBow8G5427 Salvia bowleyana
Sed0020522 Sechium edule
Sp4g21790 Schrenkiella parvula
TAR369G0738 Trochodendron aralioides
TAR623G0165 Trochodendron aralioides
TAR623G0306 Trochodendron aralioides
THA.LOC104810016 Tarenaya hassleriana
THA.LOC104824264 Tarenaya hassleriana
Thecc.05G046000 Theobroma cacao
Thecc.05G046100 Theobroma cacao
Thecc.10G045400 Theobroma cacao
Thecc.10G045500 Theobroma cacao
Thecc.10G045600 Theobroma cacao
Thecc.10G045700 Theobroma cacao
Thecc.10G048800 Theobroma cacao
Thecc.10G048900 Theobroma cacao
Thecc.10G049000 Theobroma cacao
Thecc.10G049100 Theobroma cacao
Thecc.10G049200 Theobroma cacao
Thecc.10G049300 Theobroma cacao
Thecc.10G049400 Theobroma cacao
Thecc.10G049700 Theobroma cacao
Thecc.10G049900 Theobroma cacao
Thecc.10G050300 Theobroma cacao
Thecc.10G050400 Theobroma cacao
Thecc.10G050500 Theobroma cacao
Thecc.10G051900 Theobroma cacao
Thhalv10016769m.g Eutrema salsugineum
TPR.G13993 Trifolium pratense
TPR.G15485 Trifolium pratense
TWI63G1712 Tripterygium wilfordii
vmacro08675 Vaccinium macrocarpon
VMungo0720G0087 Vigna mungo
VMungo1383G3113 Vigna mungo
Zm00001eb207690 Zea mays

User provided reference genes

Program Settings