Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07990 Brassica napus
A03p12410 Brassica napus
A10p16100 Brassica napus
Aa31LG3G13910 Aethionema arabicum
Aa31sc129G110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1156 Anthoceros agrestis
Actinidia04278 Actinidia chinensis
Actinidia04280 Actinidia chinensis
Actinidia10486 Actinidia chinensis
Actinidia23541 Actinidia chinensis
Actinidia26338 Actinidia chinensis
Ah.09g226600 Amaranthus hybridus
AL8G34170 Arabidopsis lyrata
Aqoxy3G04310 Aquilegia oxysepala
Aqoxy7G03469_Aqoxy7G03470 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BQEK3T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E4NDZP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I77GVJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L7UW02 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U4K9V9 Arachis hypogaea
AT5G58070 Arabidopsis thaliana
ATR1153G026 Amborella trichopoda
Atru.chr7.159 Acer truncatum
AUR62011274 Chenopodium quinoa
AUR62039740 Chenopodium quinoa
BcaB01g04554 Brassica carinata
BcaB05g22400 Brassica carinata
BcaB08g36152 Brassica carinata
BcaC03g14124 Brassica carinata
BcaC03g14125 Brassica carinata
BcaC04g19909 Brassica carinata
BolC2t07474H Brassica oleracea
BolC2t07477H Brassica oleracea
BolC3t13899H Brassica oleracea
BolC9t57852H Brassica oleracea
BraA02t05870Z Brassica rapa
BraA02t05872Z Brassica rapa
BraA03t10555Z Brassica rapa
BraA10t43619Z Brassica rapa
C02p13620 Brassica napus
C02p13650 Brassica napus
C03p14580 Brassica napus
C09p49990 Brassica napus
CAN.G520.3 Capsicum annuum
CAN.G520.6 Capsicum annuum
CAN.G520.7 Capsicum annuum
CAN.G551.27 Capsicum annuum
CANSAT11G0225 Cannabis sativa
CANSAT11G1901 Cannabis sativa
CANSAT11G2588 Cannabis sativa
CARHR271880 Cardamine hirsuta
Carub.0008s1862 Capsella rubella
Ca_21107_v3 Cicer arietinum L.
Ca_21108_v3 Cicer arietinum L.
CBR_g19158 Chara braunii
Cc06_g15290 Coffea canephora
Cc06_g15300 Coffea canephora
CDE01G0381 Ceratophyllum demersum
CDE02G3940 Ceratophyllum demersum
CDE05G3171 Ceratophyllum demersum
Cfa020852 Carpinus fangiana
Ciclev10009622m.g Citrus clementina
CiPaw.15G173600 Carya illinoinensis
CiPaw.16G115300 Carya illinoinensis
ClCG06G012210 Citrullus lanatus
ClCG06G012220 Citrullus lanatus
ClCG11G003530 Citrullus lanatus
COL.COLO4_18771 Corchorus olitorius
Cpa.g.sc43.125 Carica papaya
CsaV3_1G028710 Cucumis sativus L.
CsaV3_2G003400 Cucumis sativus L.
CSS0013331 Camellia sinensis var. sinensis
CSS0029356 Camellia sinensis var. sinensis
CSS0034071 Camellia sinensis var. sinensis
DCAR_017902 Daucus carota
DCAR_019372 Daucus carota
Dinv41403 Davidia involucrata
Dinv42888 Davidia involucrata
Dinv43212 Davidia involucrata
Duzib168G0191 Durio zibethinus
Duzib168G0965 Durio zibethinus
Duzib187G0775 Durio zibethinus
ECA236G4865 Erigeron canadensis
ECA236G5021 Erigeron canadensis
EL10Ac8g18842 Beta vulgaris
Eucgr.C00370 Eucalyptus grandis
Eucgr.C00374 Eucalyptus grandis
Eucgr.C00375 Eucalyptus grandis
Eucgr.C00376 Eucalyptus grandis
Eucgr.C00377 Eucalyptus grandis
Eucgr.C04044 Eucalyptus grandis
Eucgr.E01829 Eucalyptus grandis
Eucgr.L00627 Eucalyptus grandis
FAN19G1614 Fragaria x ananassa
FAN23G2945 Fragaria x ananassa
FAN26G1065 Fragaria x ananassa
FAN28G0838 Fragaria x ananassa
FvH4_1g01260 Fragaria vesca
Glyma.09G098900 Glycine max
Glyma.13G155200 Glycine max
Glyma.15G205900 Glycine max
Gohir.A05G051200 Gossypium hirsutum
Gohir.A07G026000 Gossypium hirsutum
Gohir.D05G052700 Gossypium hirsutum
Gohir.D07G029900 Gossypium hirsutum
Gorai.001G031100 Gossypium raimondii
Gorai.009G054500 Gossypium raimondii
GSVIVG01003729001 Vitis vinifera
HanXRQChr01g0019151 Helianthus annuus
HanXRQChr05g0145371 Helianthus annuus
HanXRQChr06g0180591 Helianthus annuus
HanXRQChr06g0182071 Helianthus annuus
HanXRQChr17g0547711 Helianthus annuus
Haze_19240 Corylus avellana
Hma1.2p1_0028F.1_g017340 Hydrangea macrophylla
Hma1.2p1_0222F.1_g093250 Hydrangea macrophylla
Hund00708 Selenicereus undatus
Lalb_Chr07g0179701 Lupinus albus
Lalb_Chr13g0300991 Lupinus albus
Lalb_Chr13g0301021 Lupinus albus
Lalb_Chr13g0301031 Lupinus albus
Lalb_Chr13g0301071 Lupinus albus
Lj4g0022022 Lotus japonicus
Lj7A454T32 Lonicera japonica
Lsat_1_v5_gn_8_61201 Lactuca sativa
Lsat_1_v5_gn_8_61241 Lactuca sativa
Manes.06G038651 Manihot esculenta
Manes.14G141400 Manihot esculenta
Mapoly0161s0027 Marchantia polymorpha
Mapoly0161s0030 Marchantia polymorpha
MBI14_g05270_MAGBIO Magnolia biondii
MBI15_g09158_MAGBIO Magnolia biondii
MBI15_g14741_MAGBIO Magnolia biondii
MD02G1010500 Malus domestica
MD07G1286300 Malus domestica
MD15G1155500 Malus domestica
Medtr4g131390 Medicago truncatula
Medtr4g131400 Medicago truncatula
Medtr4g131500 Medicago truncatula
Medtr5g082980 Medicago truncatula
MELO3C004486.2 Cucumis melo
MELO3C010244.2 Cucumis melo
Migut.K00344 Erythranthe guttata
MSTRG.6109 Avicennia marina
Nitab4.5_0001094g0130 Nicotiana tabacum
Nitab4.5_0001478g0150 Nicotiana tabacum
Nitab4.5_0002315g0020 Nicotiana tabacum
Nitab4.5_0003649g0020 Nicotiana tabacum
Nn2g12303 Nelumbo nucifera
Nn8g39800 Nelumbo nucifera
Oeu026544.2 Olea europaea
Oeu028816.2 Olea europaea
Oeu050478.2 Olea europaea
Os02g0612900 Oryza sativa ssp. japonica
Os08g0440100 Oryza sativa ssp. japonica
Peaxi162Scf00108g00615 Petunia axillaris
Peaxi162Scf00347g00616 Petunia axillaris
Peaxi162Scf00347g00618 Petunia axillaris
Peaxi162Scf00347g00625 Petunia axillaris
PGR142G1361 Punica granatum
PGR142G3740 Punica granatum
PGSC0003DMG400003187 Solanum tuberosum
PGSC0003DMG400007892 Solanum tuberosum
PGSC0003DMG400007893 Solanum tuberosum
Phvul.003G158100 Phaseolus vulgaris
Phvul.009G194100 Phaseolus vulgaris
Potri.018G110800 Populus trichocarpa
Pp3c18_22450 Physcomitrium patens
Pp3c19_7324 Physcomitrium patens
Prupe.7G259600 Prunus persica
Psat1g022240 Pisum sativum
Psat4g008960 Pisum sativum
Psat4g009000 Pisum sativum
Psat4g009200 Pisum sativum
PSO339G4113 Papaver somniferum
PSO384G3133 Papaver somniferum
QL02p092516 Quercus lobata
RcHm_v2.0_Chr2g0086051 Rosa chinensis
Rhsim01G0043700 Rhododendron simsii
Rhsim01G0044000 Rhododendron simsii
Rhsim03G0255900 Rhododendron simsii
Sabra18G0093500 Salix brachista
SalBow6G4059 Salvia bowleyana
SalBow8G4087 Salvia bowleyana
Sc08g0005000 Simmondsia chinensis
Sed0002423 Sechium edule
Sed0011595 Sechium edule
Sed0022031 Sechium edule
SGA_v2.0_scaffold206G41820 Striga asiatica
SMO232G0063 Selaginella moellendorffii
Solyc07g005210.3 Solanum lycopersicum
Solyc12g010320.2 Solanum lycopersicum
Sopen07g001560 Solanum pennellii
Sopen12g005200 Solanum pennellii
Sp6g19740 Schrenkiella parvula
TAR625G0968 Trochodendron aralioides
TAR626G1088 Trochodendron aralioides
THA.LOC104811838 Tarenaya hassleriana
Thecc.09G034200 Theobroma cacao
Thecc.09G034400 Theobroma cacao
Thhalv10012050m.g Eutrema salsugineum
Thhalv10014775m.g Eutrema salsugineum
TPR.G37026 Trifolium pratense
TWI34G0588 Tripterygium wilfordii
TWI63G1701 Tripterygium wilfordii
unitig_0.g515 Utricularia gibba
unitig_60.g25523 Utricularia gibba
vmacro06095 Vaccinium macrocarpon
vmacro13041 Vaccinium macrocarpon
vmacro13042 Vaccinium macrocarpon
VMungo1215G3281 Vigna mungo
VMungo1220G0001 Vigna mungo
VMungo1309G2170 Vigna mungo
Zm00001eb041200 Zea mays
Zm00001eb247000 Zea mays

User provided reference genes

Program Settings