Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p21580 Brassica napus
A10p17970 Brassica napus
Aa31LG1G12720 Aethionema arabicum
Aa31sc412G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3378 Anthoceros agrestis
Actinidia03709 Actinidia chinensis
Actinidia07162 Actinidia chinensis
Actinidia07163 Actinidia chinensis
Actinidia24125 Actinidia chinensis
Ah.01g003100 Amaranthus hybridus
Ah.01g014170 Amaranthus hybridus
Ah.09g236030 Amaranthus hybridus
Ah.16g109750 Amaranthus hybridus
AL5G23580 Arabidopsis lyrata
AL8G37350 Arabidopsis lyrata
Aqoxy1G01178 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0LE775 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.69V1RT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AZZ9A8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HZ0MGW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W3GPPR Arachis hypogaea
AT3G45090 Arabidopsis thaliana
AT5G60760 Arabidopsis thaliana
ATR0680G067 Amborella trichopoda
Atru.chr3.3565 Acer truncatum
AUR62014730 Chenopodium quinoa
AUR62016912 Chenopodium quinoa
AUR62022769 Chenopodium quinoa
AUR62029221 Chenopodium quinoa
BcaB01g01114 Brassica carinata
BcaB05g22669 Brassica carinata
BcaB08g36377 Brassica carinata
BcaC01g01987 Brassica carinata
BcaC03g13939 Brassica carinata
BcaC04g19739 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p00160 Brassica napus
BolC2t07222H Brassica oleracea
BolC3t19240H Brassica oleracea
BolC9t58225H Brassica oleracea
BraA02t05705Z Brassica rapa
BraA06t25245Z Brassica rapa
BraA10t43872Z Brassica rapa
C02p11480 Brassica napus
C03p69780 Brassica napus
C09p53480 Brassica napus
CAN.G309.19 Capsicum annuum
CANSAT54G2819 Cannabis sativa
CARHR150850 Cardamine hirsuta
CARHR274440 Cardamine hirsuta
Carub.0005s1089 Capsella rubella
Carub.0008s2144 Capsella rubella
Ca_01391_v3 Cicer arietinum L.
Ca_19299_v3 Cicer arietinum L.
CBR_g25962 Chara braunii
Cc01_g10700 Coffea canephora
CDE02G3566 Ceratophyllum demersum
CDE09G0900 Ceratophyllum demersum
Ciclev10027892m.g Citrus clementina
CiPaw.13G117600 Carya illinoinensis
CiPaw.14G086200 Carya illinoinensis
ClCG02G021350 Citrullus lanatus
ClCG03G002830 Citrullus lanatus
COL.COLO4_18282 Corchorus olitorius
COL.COLO4_18283 Corchorus olitorius
Cpa.g.sc65.24 Carica papaya
Cpa.g.sc65.25 Carica papaya
Cre09.g393395 Chlamydomonas reinhardtii
CsaV3_1G013720 Cucumis sativus L.
CsaV3_6G014150 Cucumis sativus L.
CSS0019309 Camellia sinensis var. sinensis
CSS0019940 Camellia sinensis var. sinensis
CSS0038638 Camellia sinensis var. sinensis
DCAR_006079 Daucus carota
DCAR_018789 Daucus carota
DCAR_026054 Daucus carota
DCAR_028437 Daucus carota
Dinv29348 Davidia involucrata
Dinv32695 Davidia involucrata
Dinv35773 Davidia involucrata
Dinv35774 Davidia involucrata
Duzib150G0297 Durio zibethinus
Duzib168G1410 Durio zibethinus
Duzib170G0531 Durio zibethinus
ECA238G4760 Erigeron canadensis
ECA248G3970 Erigeron canadensis
EL10Ac8g20621 Beta vulgaris
EL10Ac9g22565 Beta vulgaris
Eucgr.B02534 Eucalyptus grandis
FAN16G1387 Fragaria x ananassa
FAN21G3383 Fragaria x ananassa
FAN25G3413 Fragaria x ananassa
FvH4_3g31410 Fragaria vesca
Glyma.11G195800 Glycine max
Glyma.12G078500 Glycine max
Gohir.A03G031500 Gossypium hirsutum
Gohir.A05G105900 Gossypium hirsutum
Gohir.A13G232100 Gossypium hirsutum
Gohir.D03G136800 Gossypium hirsutum
Gohir.D05G106000 Gossypium hirsutum
Gohir.D13G237700 Gossypium hirsutum
Gorai.003G143900 Gossypium raimondii
Gorai.009G110000 Gossypium raimondii
Gorai.013G268500 Gossypium raimondii
GSVIVG01025713001 Vitis vinifera
GSVIVG01031525001 Vitis vinifera
HanXRQChr01g0018761 Helianthus annuus
HanXRQChr09g0259331 Helianthus annuus
HanXRQChr11g0346271 Helianthus annuus
HanXRQChr14g0452591 Helianthus annuus
Haze_23765 Corylus avellana
Hma1.2p1_0297F.1_g117020 Hydrangea macrophylla
Hma1.2p1_0714F.1_g207900 Hydrangea macrophylla
HPP92_005087 Vanilla planifolia
HPP92_015167 Vanilla planifolia
HPP92_022071 Vanilla planifolia
Hund08154 Selenicereus undatus
Hund23630 Selenicereus undatus
Lalb_Chr01g0004481 Lupinus albus
Lalb_Chr14g0374541 Lupinus albus
Lalb_Chr22g0350331 Lupinus albus
Lj1C198T4 Lonicera japonica
Lj2C1017G6 Lonicera japonica
Lj3g0021435 Lotus japonicus
Lsat_1_v5_gn_1_63561 Lactuca sativa
Lsat_1_v5_gn_2_99561 Lactuca sativa
Manes.04G016300 Manihot esculenta
Manes.11G149400 Manihot esculenta
Mapoly0054s0108 Marchantia polymorpha
MBI09_g41707_MAGBIO Magnolia biondii
MBI09_g41938_MAGBIO Magnolia biondii
MBI13_g15298_MAGBIO Magnolia biondii
MBI18_g00529_MAGBIO Magnolia biondii
MD03G1124200 Malus domestica
MD11G1141100 Malus domestica
MD11G1141200 Malus domestica
Medtr2g095260 Medicago truncatula
Medtr4g057960 Medicago truncatula
MELO3C004936.2 Cucumis melo
MELO3C026918.2 Cucumis melo
MELO3C027254.2 Cucumis melo
Migut.D02256 Erythranthe guttata
Migut.N02581 Erythranthe guttata
MSTRG.12333 Avicennia marina
MSTRG.17781 Avicennia marina
Nitab4.5_0000181g0190 Nicotiana tabacum
Nitab4.5_0002693g0010 Nicotiana tabacum
Nitab4.5_0003421g0010 Nicotiana tabacum
Nitab4.5_0003421g0020 Nicotiana tabacum
Nitab4.5_0014614g0010 Nicotiana tabacum
Nn2g13754 Nelumbo nucifera
Nn7g36373 Nelumbo nucifera
Oeu009378.1 Olea europaea
Oeu013532.1 Olea europaea
Oeu049269.1 Olea europaea
Os02g0819400 Oryza sativa ssp. japonica
Os09g0572200 Oryza sativa ssp. japonica
Peaxi162Scf00115g00081 Petunia axillaris
PGR102G1303 Punica granatum
PGSC0003DMG400001147 Solanum tuberosum
Phvul.011G082700 Phaseolus vulgaris
Potri.004G213500 Populus trichocarpa
Potri.009G009200 Populus trichocarpa
Pp3c16_14220 Physcomitrium patens
Pp3c25_6240 Physcomitrium patens
Pp3c2_7230 Physcomitrium patens
PRCOL_00001663 Prasinoderma coloniale
Prupe.6G106900 Prunus persica
Psat5g279080 Pisum sativum
Psat7g147000 Pisum sativum
PSO063G1289 Papaver somniferum
PSO339G5507 Papaver somniferum
QL01p020854 Quercus lobata
RcHm_v2.0_Chr5g0058141 Rosa chinensis
Rhsim01G0212600 Rhododendron simsii
Sabra09G0005400 Salix brachista
SalBow3G1254 Salvia bowleyana
SalBow3G3038 Salvia bowleyana
Sc15g0001640 Simmondsia chinensis
Sed0007637 Sechium edule
Sed0018487 Sechium edule
Sed0026273 Sechium edule
SEGI_21143 Sequoiadendron giganteum
SEGI_27372 Sequoiadendron giganteum
SEGI_28081 Sequoiadendron giganteum
SEGI_40205 Sequoiadendron giganteum
SGA_v2.0_scaffold116G32234 Striga asiatica
SGA_v2.0_scaffold127G34029 Striga asiatica
SGA_v2.0_scaffold180G39616 Striga asiatica
SMO119G0285 Selaginella moellendorffii
Solyc11g069780.3 Solanum lycopersicum
Sopen11g028500 Solanum pennellii
Sp5g16180 Schrenkiella parvula
Sp6g22340 Schrenkiella parvula
TAR623G0967 Trochodendron aralioides
TAR633G1805 Trochodendron aralioides
TAR633G1818 Trochodendron aralioides
TAR636G0051 Trochodendron aralioides
TAR636G0186 Trochodendron aralioides
TAR636G2612 Trochodendron aralioides
TAR636G3412 Trochodendron aralioides
THA.LOC104799514 Tarenaya hassleriana
Thecc.09G346800 Theobroma cacao
Thhalv10002416m.g Eutrema salsugineum
Thhalv10012777m.g Eutrema salsugineum
TPR.G11595 Trifolium pratense
TPR.G6175 Trifolium pratense
TWI31G0594 Tripterygium wilfordii
TWI79G1407 Tripterygium wilfordii
vmacro03223 Vaccinium macrocarpon
vmacro14412 Vaccinium macrocarpon
VMungo1127G0985 Vigna mungo
Zm00001eb095770 Zea mays
Zm00001eb191270 Zea mays
Zm00001eb259060 Zea mays
Zm00001eb307540 Zea mays

User provided reference genes

Program Settings