Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p39160 Brassica napus
A05p18190 Brassica napus
A05p34830 Brassica napus
Aa31LG10G1660 Aethionema arabicum
Aa31LG8G1800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.904 Anthoceros agrestis
Actinidia00870 Actinidia chinensis
Actinidia03647 Actinidia chinensis
Actinidia12620 Actinidia chinensis
Ah.06g187540 Amaranthus hybridus
AL3G26920 Arabidopsis lyrata
Aqoxy1G01723 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RU54A6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SDH4Q1 Arachis hypogaea
AT1G53590 Arabidopsis thaliana
AT3G14590 Arabidopsis thaliana
ATR0585G029 Amborella trichopoda
AUR62019704 Chenopodium quinoa
AUR62037985 Chenopodium quinoa
BcaB02g10911 Brassica carinata
BcaB06g25372 Brassica carinata
BcaB08g35411 Brassica carinata
BcaC05g29056 Brassica carinata
BcaC05g29058 Brassica carinata
BcaC08g44126 Brassica carinata
BcaC09g48428 Brassica carinata
BolC1t04943H Brassica oleracea
BolC1t04947H Brassica oleracea
BolC5t33947H Brassica oleracea
BolC6t36679H Brassica oleracea
BraA01t03961Z Brassica rapa
BraA05t20712Z Brassica rapa
BraA05t22295Z Brassica rapa
C01p49860 Brassica napus
C01p49900 Brassica napus
C05p52680 Brassica napus
C06p15020 Brassica napus
CAN.G315.9 Capsicum annuum
CAN.G375.76 Capsicum annuum
CANSAT56G4466 Cannabis sativa
CARHR043850 Cardamine hirsuta
CARHR089550 Cardamine hirsuta
CARHR149030 Cardamine hirsuta
CARHR216930 Cardamine hirsuta
CARHR216940 Cardamine hirsuta
CARHR255120 Cardamine hirsuta
CARHR255130 Cardamine hirsuta
Carub.0001s4280 Capsella rubella
Carub.0003s1429 Capsella rubella
Ca_03403_v3 Cicer arietinum L.
CBR_g24050 Chara braunii
CBR_g58829 Chara braunii
CBR_g8785 Chara braunii
Cc05_g10450 Coffea canephora
CDE02G0339 Ceratophyllum demersum
CDE02G2341 Ceratophyllum demersum
CDE02G2342 Ceratophyllum demersum
CDE02G2527 Ceratophyllum demersum
Cfa019475 Carpinus fangiana
Cfa025744 Carpinus fangiana
Ciclev10018996m.g Citrus clementina
CiPaw.11G067800 Carya illinoinensis
CiPaw.12G046400 Carya illinoinensis
ClCG11G016980 Citrullus lanatus
COL.COLO4_17437 Corchorus olitorius
Cpa.g.c34167.1 Carica papaya
Cre01.g049100 Chlamydomonas reinhardtii
CsaV3_4G032610 Cucumis sativus L.
CSS0027870 Camellia sinensis var. sinensis
CSS0029038 Camellia sinensis var. sinensis
CSS0044469 Camellia sinensis var. sinensis
DCAR_017572 Daucus carota
DCAR_017573 Daucus carota
DCAR_025852 Daucus carota
Dinv13327 Davidia involucrata
Dinv26680 Davidia involucrata
Duzib213G0773 Durio zibethinus
Duzib268G0118 Durio zibethinus
ECA234G0027 Erigeron canadensis
ECA234G1174 Erigeron canadensis
ECA240G0884 Erigeron canadensis
EL10Ac4g08465 Beta vulgaris
Eucgr.F01402 Eucalyptus grandis
Eucgr.F03215 Eucalyptus grandis
Eucgr.F03216 Eucalyptus grandis
FAN11G2256 Fragaria x ananassa
FAN11G2574 Fragaria x ananassa
FAN16G0240 Fragaria x ananassa
FAN16G2563 Fragaria x ananassa
FAN21G3942 Fragaria x ananassa
FAN25G2855 Fragaria x ananassa
FvH4_3g16980 Fragaria vesca
FvH4_3g17020 Fragaria vesca
Glyma.13G261200 Glycine max
Glyma.15G245600 Glycine max
Gohir.A01G043500 Gossypium hirsutum
Gohir.A04G046400 Gossypium hirsutum
Gohir.A07G155726 Gossypium hirsutum
Gohir.D01G034600 Gossypium hirsutum
Gorai.002G042800 Gossypium raimondii
Gorai.009G359900 Gossypium raimondii
GSVIVG01000623001 Vitis vinifera
HanXRQChr03g0072701 Helianthus annuus
HanXRQChr07g0206481 Helianthus annuus
HanXRQChr10g0305681 Helianthus annuus
HanXRQChr12g0373531 Helianthus annuus
Haze_08475 Corylus avellana
Hma1.2p1_0048F.1_g028080 Hydrangea macrophylla
Hma1.2p1_0280F.1_g112850 Hydrangea macrophylla
HPP92_002947 Vanilla planifolia
HPP92_021477 Vanilla planifolia
HPP92_023284 Vanilla planifolia
Hund02324 Selenicereus undatus
Lalb_Chr01g0016131 Lupinus albus
Lalb_Chr01g0016141 Lupinus albus
Lalb_Chr20g0109021 Lupinus albus
Lj1C819T6 Lonicera japonica
Lj3g0005272 Lotus japonicus
Lj8C143T14 Lonicera japonica
Lsat_1_v5_gn_5_126041 Lactuca sativa
Lsat_1_v5_gn_9_101380 Lactuca sativa
Manes.03G091048 Manihot esculenta
Manes.15G100600 Manihot esculenta
Mapoly0005s0081 Marchantia polymorpha
Mapoly0122s0015 Marchantia polymorpha
MBI07_g26364_MAGBIO Magnolia biondii
MBI10_g02221_MAGBIO Magnolia biondii
MBI16_g20738_MAGBIO Magnolia biondii
MCO05G419 Micromonas commoda
MCO13G496 Micromonas commoda
MD00G1185500 Malus domestica
MD00G1185600 Malus domestica
MD03G1254200 Malus domestica
MD03G1254300 Malus domestica
MD03G1254900 Malus domestica
MD11G1275800 Malus domestica
MD11G1276000 Malus domestica
Medtr2g072180 Medicago truncatula
MELO3C025594.2 Cucumis melo
Migut.M00625 Erythranthe guttata
MSTRG.15019 Avicennia marina
Nitab4.5_0000639g0080 Nicotiana tabacum
Nitab4.5_0005492g0010 Nicotiana tabacum
Nitab4.5_0006409g0010 Nicotiana tabacum
Nitab4.5_0007142g0010 Nicotiana tabacum
Nn3g20725 Nelumbo nucifera
Nn4g26545 Nelumbo nucifera
Oeu006135.1 Olea europaea
Oeu006143.2 Olea europaea
Oeu009875.1 Olea europaea
Oeu026469.1 Olea europaea
Oeu026470.2 Olea europaea
Os01g0242600 Oryza sativa ssp. japonica
Os02g0313700 Oryza sativa ssp. japonica
Peaxi162Scf00000g00522 Petunia axillaris
Peaxi162Scf00111g01142 Petunia axillaris
PGR031G3933 Punica granatum
PGR083G0018 Punica granatum
PGSC0003DMG400007079 Solanum tuberosum
PGSC0003DMG400008571 Solanum tuberosum
Phvul.005G062600 Phaseolus vulgaris
Potri.001G379800 Populus trichocarpa
Pp3c11_23120 Physcomitrium patens
Pp3c16_25540 Physcomitrium patens
Pp3c18_18010 Physcomitrium patens
Pp3c19_3120 Physcomitrium patens
Pp3c5_28190 Physcomitrium patens
Pp3c7_3910 Physcomitrium patens
Prupe.4G152200 Prunus persica
Prupe.4G152300 Prunus persica
Psat1g009080 Pisum sativum
PSO541G4432 Papaver somniferum
PSO541G5530 Papaver somniferum
PSO675G5015 Papaver somniferum
QL04p069054 Quercus lobata
RcHm_v2.0_Chr1g0347551 Rosa chinensis
RcHm_v2.0_Chr2g0159501 Rosa chinensis
RcHm_v2.0_Chr2g0159511 Rosa chinensis
RcHm_v2.0_Chr4g0392471 Rosa chinensis
RcHm_v2.0_Chr5g0028301 Rosa chinensis
RcHm_v2.0_Chr5g0028351 Rosa chinensis
RcHm_v2.0_Chr5g0039631 Rosa chinensis
Rhsim06G0186500 Rhododendron simsii
RhsimUnG0205700 Rhododendron simsii
SalBow8G2367 Salvia bowleyana
Sc03g0010920 Simmondsia chinensis
Sc16g0007860 Simmondsia chinensis
Sed0010110 Sechium edule
Sed0022537 Sechium edule
SEGI_35320 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24332 Striga asiatica
SHI27675 Sapria himalayana
SMO337G0056 Selaginella moellendorffii
Solyc07g061935.1 Solanum lycopersicum
Solyc07g061950.4 Solanum lycopersicum
Solyc12g011420.2 Solanum lycopersicum
Sopen07g030220 Solanum pennellii
Sopen12g006770 Solanum pennellii
Sp1g40090 Schrenkiella parvula
Sp3g12860 Schrenkiella parvula
TAR626G1608 Trochodendron aralioides
TAR627G0639 Trochodendron aralioides
TAR629G2496 Trochodendron aralioides
THA.LOC104822597 Tarenaya hassleriana
Thecc.07G141900 Theobroma cacao
Thhalv10011273m.g Eutrema salsugineum
Thhalv10020164m.g Eutrema salsugineum
TPR.G29673 Trifolium pratense
TWI38G0873 Tripterygium wilfordii
TWI38G2140 Tripterygium wilfordii
unitig_62.g23092 Utricularia gibba
vmacro09425 Vaccinium macrocarpon
vmacro12002 Vaccinium macrocarpon
vmacro13871 Vaccinium macrocarpon
VMungo1080G1562 Vigna mungo
Zm00001eb203260 Zea mays
Zm00001eb336950 Zea mays

User provided reference genes

Program Settings