Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p26200 Brassica napus
A05p11540 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_117.2352 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.502 Anthoceros agrestis
Actinidia26813 Actinidia chinensis
Actinidia28380 Actinidia chinensis
Actinidia38664 Actinidia chinensis
Ah.01g021820 Amaranthus hybridus
AL3G31720 Arabidopsis lyrata
Aqoxy7G03352 Aquilegia oxysepala
Aqoxy7G03602 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.29BG5G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3BMJ16 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RM066D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RV0KSM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X41X8Q Arachis hypogaea
AT3G18430 Arabidopsis thaliana
ATR0739G135 Amborella trichopoda
ATR0767G153 Amborella trichopoda
Atru.chr1.2861_Atru.chr1.2862 Acer truncatum
Atru.chr7.334 Acer truncatum
AUR62022167 Chenopodium quinoa
AUR62025081 Chenopodium quinoa
AUR62025083 Chenopodium quinoa
AUR62025084 Chenopodium quinoa
AUR62025087 Chenopodium quinoa
AUR62025090 Chenopodium quinoa
AUR62025091 Chenopodium quinoa
AUR62031874 Chenopodium quinoa
AUR62032703 Chenopodium quinoa
BcaB06g28738 Brassica carinata
BcaC02g07793 Brassica carinata
BcaC02g11468 Brassica carinata
BcaC02g11470 Brassica carinata
BolC4t23075H Brassica oleracea
BolC4t27828H Brassica oleracea
BraA04t18124Z Brassica rapa
BraA05t20101Z Brassica rapa
C04p15010 Brassica napus
C04p63580 Brassica napus
CAN.G160.4 Capsicum annuum
CAN.G407.15 Capsicum annuum
CANSAT11G0596 Cannabis sativa
CANSAT56G0572 Cannabis sativa
CARHR093790 Cardamine hirsuta
Carub.0003s1821 Capsella rubella
Ca_01046_v3 Cicer arietinum L.
Ca_21149_v3 Cicer arietinum L.
CBR_g19540 Chara braunii
Cc04_g04610 Coffea canephora
Cc06_g14580 Coffea canephora
CDE02G1218 Ceratophyllum demersum
CDE09G1373 Ceratophyllum demersum
Cfa020796 Carpinus fangiana
Ciclev10009711m.g Citrus clementina
Ciclev10026606m.g Citrus clementina
CiPaw.01G217400 Carya illinoinensis
CiPaw.01G250400 Carya illinoinensis
CiPaw.03G256200 Carya illinoinensis
CiPaw.15G165300 Carya illinoinensis
CiPaw.16G107400 Carya illinoinensis
ClCG07G012260 Citrullus lanatus
ClCG09G003090 Citrullus lanatus
COL.COLO4_11862 Corchorus olitorius
COL.COLO4_23939 Corchorus olitorius
Cpa.g.sc10.150 Carica papaya
Cpa.g.sc46.190 Carica papaya
Cre15.g641250 Chlamydomonas reinhardtii
CsaV3_4G001890 Cucumis sativus L.
CsaV3_7G032200 Cucumis sativus L.
DCAR_016277 Daucus carota
DCAR_019415 Daucus carota
Dinv38140 Davidia involucrata
Dinv41348 Davidia involucrata
Dinv42827 Davidia involucrata
Dinv43273 Davidia involucrata
Duzib150G0065 Durio zibethinus
Duzib160G0576 Durio zibethinus
Duzib192G0158 Durio zibethinus
ECA232G0959 Erigeron canadensis
ECA236G4987 Erigeron canadensis
EL10Ac9g22042 Beta vulgaris
Eucgr.E00875 Eucalyptus grandis
Eucgr.F03918 Eucalyptus grandis
FAN05G2439 Fragaria x ananassa
FAN14G3406 Fragaria x ananassa
FAN23G0275 Fragaria x ananassa
FAN26G0346 Fragaria x ananassa
FAN28G1568 Fragaria x ananassa
FvH4_1g00630 Fragaria vesca
FvH4_6g29301 Fragaria vesca
Glyma.02G206100 Glycine max
Glyma.13G367100 Glycine max
Glyma.15G006300 Glycine max
Glyma.17G071900 Glycine max
Gohir.A04G059852 Gossypium hirsutum
Gohir.A09G086000 Gossypium hirsutum
Gohir.D04G088601 Gossypium hirsutum
Gohir.D09G086100 Gossypium hirsutum
Gorai.006G102200 Gossypium raimondii
Gorai.012G098900 Gossypium raimondii
GSVIVG01017451001 Vitis vinifera
GSVIVG01023655001 Vitis vinifera
HanXRQChr05g0131671 Helianthus annuus
HanXRQChr05g0137431 Helianthus annuus
HanXRQChr05g0141641 Helianthus annuus
HanXRQChr12g0377051 Helianthus annuus
HanXRQChr14g0459701 Helianthus annuus
HanXRQChr15g0469411 Helianthus annuus
HanXRQChr16g0500281 Helianthus annuus
HanXRQChr17g0565691 Helianthus annuus
Haze_16598 Corylus avellana
Haze_19154 Corylus avellana
Hma1.2p1_0222F.1_g093820 Hydrangea macrophylla
Hma1.2p1_0242F.1_g100790 Hydrangea macrophylla
HPP92_010858 Vanilla planifolia
HPP92_010894 Vanilla planifolia
HPP92_018548 Vanilla planifolia
Hund06547 Selenicereus undatus
Lalb_Chr12g0198791 Lupinus albus
Lalb_Chr14g0373881 Lupinus albus
Lalb_Chr22g0350791 Lupinus albus
Lj3g0027939 Lotus japonicus
Lj4g0009927 Lotus japonicus
Lj9A497T72 Lonicera japonica
Lj9A720T31 Lonicera japonica
Lsat_1_v5_gn_4_88401 Lactuca sativa
Lsat_1_v5_gn_8_64080 Lactuca sativa
Manes.04G109500 Manihot esculenta
Manes.06G031300 Manihot esculenta
Mapoly0005s0122 Marchantia polymorpha
MBI14_g04236_MAGBIO Magnolia biondii
MBI14_g16685_MAGBIO Magnolia biondii
MBI14_g31957_MAGBIO Magnolia biondii
MBI14_g46928_MAGBIO Magnolia biondii
MCO12G326 Micromonas commoda
MD02G1005100 Malus domestica
MD15G1149100 Malus domestica
MD15G1149200 Malus domestica
MD17G1216100 Malus domestica
Medtr2g104130 Medicago truncatula
Medtr4g130410 Medicago truncatula
MELO3C017844.2 Cucumis melo
MELO3C023443.2 Cucumis melo
Migut.I00741 Erythranthe guttata
Migut.J01384 Erythranthe guttata
MSTRG.11158 Avicennia marina
MSTRG.26262 Avicennia marina
Nitab4.5_0001271g0120 Nicotiana tabacum
Nitab4.5_0002322g0010 Nicotiana tabacum
Nitab4.5_0003157g0080 Nicotiana tabacum
Nitab4.5_0003551g0090 Nicotiana tabacum
Nitab4.5_0004013g0070 Nicotiana tabacum
Nitab4.5_0011991g0020 Nicotiana tabacum
Nn8g39623 Nelumbo nucifera
Nn8g40005 Nelumbo nucifera
Oeu004205.1 Olea europaea
Oeu004213.1 Olea europaea
Oeu021335.1 Olea europaea
Oeu055277.1 Olea europaea
Os02g0802400 Oryza sativa ssp. japonica
Os08g0442300 Oryza sativa ssp. japonica
Peaxi162Scf00553g00618 Petunia axillaris
Peaxi162Scf01313g00229 Petunia axillaris
PGR102G0530 Punica granatum
PGR102G1009 Punica granatum
PGSC0003DMG400011150 Solanum tuberosum
PGSC0003DMG400014207 Solanum tuberosum
Phvul.003G154200 Phaseolus vulgaris
Phvul.005G179500 Phaseolus vulgaris
Potri.003G030300 Populus trichocarpa
Potri.018G103600 Populus trichocarpa
Pp3c15_200 Physcomitrium patens
PRCOL_00001288 Prasinoderma coloniale
Prupe.3G092200 Prunus persica
Prupe.7G265900 Prunus persica
Psat5g302480 Pisum sativum
Psat7g006760 Pisum sativum
PSO063G0166 Papaver somniferum
PSO063G6531 Papaver somniferum
PSO063G6612 Papaver somniferum
PSO782G5197 Papaver somniferum
QL02p093975 Quercus lobata
QL05p032291 Quercus lobata
RcHm_v2.0_Chr2g0085251 Rosa chinensis
RcHm_v2.0_Chr2g0134491 Rosa chinensis
Rhsim03G0258800 Rhododendron simsii
Rhsim12G0189800 Rhododendron simsii
Sabra03G0016800 Salix brachista
Sabra18G0089000 Salix brachista
SalBow1G1226 Salvia bowleyana
SalBow2G0790 Salvia bowleyana
Sc12g0008810 Simmondsia chinensis
Sed0004126 Sechium edule
Sed0010729 Sechium edule
SEGI_26732 Sequoiadendron giganteum
SGA_v2.0_scaffold265G46087 Striga asiatica
SGA_v2.0_scaffold37G14751 Striga asiatica
SMO119G0131 Selaginella moellendorffii
Solyc03g117470.3 Solanum lycopersicum
Solyc07g005900.3 Solanum lycopersicum
Sopen03g036370 Solanum pennellii
Sopen07g002030 Solanum pennellii
Sp3g16540 Schrenkiella parvula
TAR203G0003 Trochodendron aralioides
TAR383G1078 Trochodendron aralioides
TAR626G0856 Trochodendron aralioides
THA.LOC104808202 Tarenaya hassleriana
THA.LOC104812466 Tarenaya hassleriana
Thecc.06G032200 Theobroma cacao
Thecc.09G152900 Theobroma cacao
Thhalv10022107m.g Eutrema salsugineum
TPR.G24888 Trifolium pratense
TPR.G37282 Trifolium pratense
TWI18G0257 Tripterygium wilfordii
TWI63G1328 Tripterygium wilfordii
unitig_37.g12683 Utricularia gibba
vmacro06058 Vaccinium macrocarpon
vmacro16877 Vaccinium macrocarpon
VMungo1215G0143 Vigna mungo
Zm00001eb041090 Zea mays
Zm00001eb176900 Zea mays
Zm00001eb192150 Zea mays

User provided reference genes

Program Settings