Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p24660 Brassica napus
A04p33180 Brassica napus
Aa31LG1G25730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2490 Anthoceros agrestis
Actinidia18386 Actinidia chinensis
Ah.07g203310 Amaranthus hybridus
AL4G42930 Arabidopsis lyrata
Aqoxy6G00001 Aquilegia oxysepala
Aqoxy6G00880 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4U54KW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GD18YF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L9LT8B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R434E2 Arachis hypogaea
AT2G44060 Arabidopsis thaliana
ATR0225G022 Amborella trichopoda
ATR0743G044 Amborella trichopoda
Atru.chr3.1961 Acer truncatum
AUR62002497 Chenopodium quinoa
AUR62023689 Chenopodium quinoa
BcaB01g03333 Brassica carinata
BcaB01g03343 Brassica carinata
BcaB06g29354 Brassica carinata
BcaB06g29513 Brassica carinata
BcaC01g05189 Brassica carinata
BcaC02g07138 Brassica carinata
BolC3t15287H Brassica oleracea
BolC4t28588H Brassica oleracea
BraA03t11672Z Brassica rapa
BraA04t18777Z Brassica rapa
C03p29400 Brassica napus
C04p70870 Brassica napus
CAN.G207.8 Capsicum annuum
CAN.G68.1 Capsicum annuum
CANSAT56G2692 Cannabis sativa
CARHR139220 Cardamine hirsuta
Carub.0004s2661 Capsella rubella
Ca_06180_v3 Cicer arietinum L.
Ca_26658_v3 Cicer arietinum L.
CBR_g39190 Chara braunii
CBR_g55417 Chara braunii
CBR_g75560 Chara braunii
Cc03_g16190 Coffea canephora
CDE02G4753 Ceratophyllum demersum
CDE04G1507 Ceratophyllum demersum
CDE07G0014 Ceratophyllum demersum
CDE09G1295 Ceratophyllum demersum
Cfa008531 Carpinus fangiana
Ciclev10020871m.g Citrus clementina
CiPaw.01G202900 Carya illinoinensis
CiPaw.02G125500 Carya illinoinensis
ClCG06G010080 Citrullus lanatus
COL.COLO4_32523 Corchorus olitorius
Cpa.g.sc9.242 Carica papaya
CsaV3_2G011930 Cucumis sativus L.
CSS0028444 Camellia sinensis var. sinensis
DCAR_023793 Daucus carota
DCAR_027489 Daucus carota
Dinv24741 Davidia involucrata
Duzib093G0930 Durio zibethinus
ECA233G0816 Erigeron canadensis
ECA248G2519 Erigeron canadensis
EL10Ac3g06181 Beta vulgaris
Eucgr.H00245 Eucalyptus grandis
FAN26G0381 Fragaria x ananassa
FAN28G2707 Fragaria x ananassa
FvH4_1g00090 Fragaria vesca
Glyma.02G277300 Glycine max
Glyma.14G037300 Glycine max
Glyma.20G044800 Glycine max
Gohir.A01G231800 Gossypium hirsutum
Gohir.A03G218500 Gossypium hirsutum
Gohir.A07G233300 Gossypium hirsutum
Gohir.A08G253400 Gossypium hirsutum
Gohir.D01G221900 Gossypium hirsutum
Gorai.002G268600 Gossypium raimondii
GSVIVG01038264001 Vitis vinifera
HanXRQChr01g0017591 Helianthus annuus
HPP92_001207 Vanilla planifolia
Hund12304 Selenicereus undatus
Lalb_Chr04g0249331 Lupinus albus
Lalb_Chr10g0106081 Lupinus albus
Lalb_Chr15g0080151 Lupinus albus
Lj6g0018713 Lotus japonicus
LjContig00564g0000582 Lotus japonicus
Lju124C5T8 Lonicera japonica
Lju41A14T32 Lonicera japonica
Lju470C1T4 Lonicera japonica
Lsat_1_v5_gn_1_82580 Lactuca sativa
Manes.01G009601 Manihot esculenta
Manes.05G208200 Manihot esculenta
Mapoly0002s0220 Marchantia polymorpha
MBI07_g27882_MAGBIO Magnolia biondii
MBI10_g03654_MAGBIO Magnolia biondii
MBI16_g27589_MAGBIO Magnolia biondii
MD02G1000600 Malus domestica
MD15G1142200 Malus domestica
Medtr3g045190 Medicago truncatula
Medtr5g088850 Medicago truncatula
MELO3C020416.2 Cucumis melo
Migut.G00799 Erythranthe guttata
Migut.N03015 Erythranthe guttata
MSTRG.8086 Avicennia marina
Nitab4.5_0000348g0040 Nicotiana tabacum
Nitab4.5_0003681g0020 Nicotiana tabacum
Nitab4.5_0005148g0040 Nicotiana tabacum
Nn1g09415 Nelumbo nucifera
Nn5g29337 Nelumbo nucifera
Oeu014978.1 Olea europaea
Os03g0843300 Oryza sativa ssp. japonica
Os07g0272300 Oryza sativa ssp. japonica
Peaxi162Scf00057g01912 Petunia axillaris
Peaxi162Scf01205g00175 Petunia axillaris
Peaxi162Scf63976g00001 Petunia axillaris
PGR142G4250 Punica granatum
PGSC0003DMG400006460 Solanum tuberosum
PGSC0003DMG400013715 Solanum tuberosum
Phvul.006G018100 Phaseolus vulgaris
Phvul.008G203600 Phaseolus vulgaris
Potri.007G146300 Populus trichocarpa
Pp3c23_18440 Physcomitrium patens
Pp3c24_14840 Physcomitrium patens
Prupe.7G271000 Prunus persica
Psat2g021400 Pisum sativum
PSO170G3486 Papaver somniferum
PSO384G3429 Papaver somniferum
PSO541G5475 Papaver somniferum
PSO675G8641 Papaver somniferum
QL10p064706 Quercus lobata
QL10p064865 Quercus lobata
QL10p064899 Quercus lobata
QL10p065831 Quercus lobata
RcHm_v2.0_Chr2g0084381 Rosa chinensis
Sabra07G0115100 Salix brachista
SalBow6G0898 Salvia bowleyana
Sc25g0002220 Simmondsia chinensis
Sed0007404 Sechium edule
Sed0022992 Sechium edule
SEGI_02724 Sequoiadendron giganteum
SGA_v2.0_scaffold12G06226 Striga asiatica
SGA_v2.0_scaffold37G14908 Striga asiatica
SHI01299 Sapria himalayana
SHI01452 Sapria himalayana
SHI03553 Sapria himalayana
SHI13210 Sapria himalayana
SHI15069 Sapria himalayana
SHI15713 Sapria himalayana
SHI22067 Sapria himalayana
SHI22213 Sapria himalayana
SHI23769 Sapria himalayana
SHI24409 Sapria himalayana
SHI28419 Sapria himalayana
SHI28938 Sapria himalayana
SHI31027 Sapria himalayana
SHI32247 Sapria himalayana
SHI32248 Sapria himalayana
SHI32657 Sapria himalayana
SHI33111 Sapria himalayana
SHI33123 Sapria himalayana
SHI33268 Sapria himalayana
SHI33323 Sapria himalayana
SHI33715 Sapria himalayana
SHI33844 Sapria himalayana
SHI34456 Sapria himalayana
SHI36402 Sapria himalayana
SHI37204 Sapria himalayana
SHI38076 Sapria himalayana
SHI38679 Sapria himalayana
SHI40070 Sapria himalayana
SHI40100 Sapria himalayana
SHI41582 Sapria himalayana
SHI42006 Sapria himalayana
SHI43834 Sapria himalayana
SHI44366 Sapria himalayana
SHI45532 Sapria himalayana
SHI45970 Sapria himalayana
SHI47228 Sapria himalayana
SHI48973 Sapria himalayana
SHI49507 Sapria himalayana
SHI49554 Sapria himalayana
SHI49584 Sapria himalayana
SHI50079 Sapria himalayana
SHI50087 Sapria himalayana
SHI50201 Sapria himalayana
SHI50436 Sapria himalayana
SHI51223 Sapria himalayana
SHI51414 Sapria himalayana
SHI51574 Sapria himalayana
SHI51633 Sapria himalayana
SHI51778 Sapria himalayana
SHI51788 Sapria himalayana
SHI51912 Sapria himalayana
SHI52789 Sapria himalayana
SHI53105 Sapria himalayana
SHI53195 Sapria himalayana
SHI53212 Sapria himalayana
SHI53497 Sapria himalayana
SHI53941 Sapria himalayana
SHI54170 Sapria himalayana
SHI54243 Sapria himalayana
SHI54444 Sapria himalayana
SHI55027 Sapria himalayana
SMO147G0113 Selaginella moellendorffii
SMO174G0085 Selaginella moellendorffii
SMO367G0480 Selaginella moellendorffii
Solyc08g015690.4 Solanum lycopersicum
Sopen08g005800 Solanum pennellii
Sopen12g008300 Solanum pennellii
Sp4g26140 Schrenkiella parvula
TAR362G1111 Trochodendron aralioides
TAR376G0188 Trochodendron aralioides
THA.LOC104802350 Tarenaya hassleriana
THA.LOC104804361 Tarenaya hassleriana
Thecc.05G000700 Theobroma cacao
Thhalv10001537m.g Eutrema salsugineum
TPR.G11914 Trifolium pratense
TPR.G16415 Trifolium pratense
TWI63G1312 Tripterygium wilfordii
unitig_8.g4743 Utricularia gibba
vmacro00731 Vaccinium macrocarpon
vmacro03772 Vaccinium macrocarpon
VMungo0540G2213 Vigna mungo
VMungo0647G1653 Vigna mungo
Zm00001eb064120 Zea mays
Zm00001eb304760 Zea mays

User provided reference genes

Program Settings