Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p11080 Brassica napus
A03p51720 Brassica napus
A05p25480 Brassica napus
A08p14160 Brassica napus
A09p34430 Brassica napus
Aa31LG2G14200 Aethionema arabicum
Aa31LG6G1800 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1154 Anthoceros agrestis
Actinidia14744 Actinidia chinensis
Actinidia18159 Actinidia chinensis
Actinidia32771 Actinidia chinensis
Ah.07g201160 Amaranthus hybridus
Ah.12g055770 Amaranthus hybridus
AL1G45950 Arabidopsis lyrata
AL7G34970 Arabidopsis lyrata
Aqoxy3G02016 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A3XJZU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FI6I6T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5GTQI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RXPY9R Arachis hypogaea
AT1G31850 Arabidopsis thaliana
AT4G19120 Arabidopsis thaliana
ATR0829G205 Amborella trichopoda
Atru.chr6.1482 Acer truncatum
AUR62007388 Chenopodium quinoa
AUR62018599 Chenopodium quinoa
BcaB03g13786 Brassica carinata
BcaB04g18530 Brassica carinata
BcaB07g32840 Brassica carinata
BcaC01g00599 Brassica carinata
BcaC05g27211 Brassica carinata
BcaC05g27956 Brassica carinata
BcaC06g30609 Brassica carinata
BcaC09g51439 Brassica carinata
BcaNung03080 Brassica carinata
BcaNung04010 Brassica carinata
BolC1t01284H Brassica oleracea
BolC3t20445H Brassica oleracea
BolC5t31843H Brassica oleracea
BolC5t32702H Brassica oleracea
BolC7t45527H Brassica oleracea
BraA01t01055Z Brassica rapa
BraA03t14259Z Brassica rapa
BraA05t21431Z Brassica rapa
BraA08t33410Z Brassica rapa
BraA09t38987Z Brassica rapa
C01p13100 Brassica napus
C03p81740 Brassica napus
C05p31140 Brassica napus
C05p39620 Brassica napus
C07p50240 Brassica napus
CAN.G1115.6 Capsicum annuum
CAN.G1115.7 Capsicum annuum
CAN.G1427.4 Capsicum annuum
CAN.G1427.6 Capsicum annuum
CARHR031190 Cardamine hirsuta
CARHR226000 Cardamine hirsuta
Carub.0001s3018 Capsella rubella
Carub.0007s2203 Capsella rubella
Ca_22481_v3 Cicer arietinum L.
Ca_25106_v3 Cicer arietinum L.
Ca_30350_v3 Cicer arietinum L.
CBR_g27793 Chara braunii
CBR_g27893 Chara braunii
CBR_g29886 Chara braunii
CBR_g29888 Chara braunii
CBR_g29890 Chara braunii
Cc08_g05190 Coffea canephora
CDE02G3530 Ceratophyllum demersum
CDE04G0289 Ceratophyllum demersum
Cfa012585 Carpinus fangiana
Ciclev10000643m.g Citrus clementina
Ciclev10006580m.g Citrus clementina
Ciclev10023579m.g Citrus clementina
Ciclev10023987m.g Citrus clementina
Ciclev10032468m.g Citrus clementina
Ciclev10032549m.g Citrus clementina
CiPaw.11G102900 Carya illinoinensis
CiPaw.12G071700 Carya illinoinensis
ClCG07G002380 Citrullus lanatus
COL.COLO4_16839 Corchorus olitorius
Cpa.g.c35741 Carica papaya
Cpa.g.sc499.1 Carica papaya
CsaV3_3G030310 Cucumis sativus L.
CSS0009325 Camellia sinensis var. sinensis
CSS0010388 Camellia sinensis var. sinensis
CSS0018384 Camellia sinensis var. sinensis
DCAR_004241 Daucus carota
DCAR_008184 Daucus carota
DCAR_024951 Daucus carota
Dinv22865 Davidia involucrata
Dinv28017 Davidia involucrata
Duzib068G0302 Durio zibethinus
Duzib084G0750 Durio zibethinus
Duzib205G0534 Durio zibethinus
ECA240G2733 Erigeron canadensis
ECA246G0307 Erigeron canadensis
EL10Ac5g11966 Beta vulgaris
Eucgr.D02595 Eucalyptus grandis
Eucgr.E01240 Eucalyptus grandis
Eucgr.E02401 Eucalyptus grandis
Eucgr.J00712 Eucalyptus grandis
FAN04G0653 Fragaria x ananassa
FAN08G0664 Fragaria x ananassa
FAN13G2661 Fragaria x ananassa
FAN18G2969 Fragaria x ananassa
FAN18G3273 Fragaria x ananassa
FvH4_5g23930 Fragaria vesca
Glyma.01G149300 Glycine max
Glyma.09G213100 Glycine max
Glyma.16G074700 Glycine max
Glyma.16G074800 Glycine max
Glyma.16G105300 Glycine max
Gohir.A08G150200 Gossypium hirsutum
Gohir.A12G202900 Gossypium hirsutum
Gohir.D08G171300 Gossypium hirsutum
Gohir.D12G205600 Gossypium hirsutum
Gorai.004G178700 Gossypium raimondii
Gorai.008G220500 Gossypium raimondii
GSVIVG01022775001 Vitis vinifera
HanXRQChr03g0081211 Helianthus annuus
HanXRQChr03g0081711 Helianthus annuus
HanXRQChr12g0384031 Helianthus annuus
HanXRQChr13g0411971 Helianthus annuus
HanXRQChr17g0539211 Helianthus annuus
Haze_08070 Corylus avellana
Hma1.2p1_1179F.1_g264590 Hydrangea macrophylla
HPP92_014407 Vanilla planifolia
HPP92_014408 Vanilla planifolia
HPP92_014413 Vanilla planifolia
Hund11147 Selenicereus undatus
Hund14345 Selenicereus undatus
Lalb_Chr05g0229421 Lupinus albus
Lalb_Chr09g0325251 Lupinus albus
Lalb_Chr09g0334451 Lupinus albus
Lalb_Chr16g0380761 Lupinus albus
Lj2g0002971 Lotus japonicus
Lj4g0011592 Lotus japonicus
Lj7A145T39 Lonicera japonica
Lj8C335G8 Lonicera japonica
Lsat_1_v5_gn_3_26661 Lactuca sativa
Lsat_1_v5_gn_5_57840 Lactuca sativa
Manes.15G186600 Manihot esculenta
Manes.17G007800 Manihot esculenta
Mapoly0012s0079 Marchantia polymorpha
MBI04_g42649_MAGBIO Magnolia biondii
MBI04_g44739_MAGBIO Magnolia biondii
MBI04_g46894_MAGBIO Magnolia biondii
MD00G1001500 Malus domestica
MD06G1015000 Malus domestica
Medtr5g026930 Medicago truncatula
Medtr8g071280 Medicago truncatula
MELO3C022753.2 Cucumis melo
Migut.A00555 Erythranthe guttata
MSTRG.11884 Avicennia marina
MSTRG.25726 Avicennia marina
Nitab4.5_0000108g0440 Nicotiana tabacum
Nitab4.5_0001424g0080 Nicotiana tabacum
Nitab4.5_0003739g0010 Nicotiana tabacum
Nitab4.5_0005880g0010 Nicotiana tabacum
Oeu042213.1 Olea europaea
Oeu044975.1 Olea europaea
Oeu046809.1 Olea europaea
Peaxi162Scf00045g00533 Petunia axillaris
Peaxi162Scf00408g00846 Petunia axillaris
PGR031G0850 Punica granatum
PGR042G2111 Punica granatum
PGSC0003DMG400018465 Solanum tuberosum
PGSC0003DMG401030861 Solanum tuberosum
Phvul.002G129100 Phaseolus vulgaris
Phvul.003G280000 Phaseolus vulgaris
Phvul.003G280100 Phaseolus vulgaris
Potri.001G131400 Populus trichocarpa
Potri.003G102400 Populus trichocarpa
Pp3c1_19710 Physcomitrium patens
Pp3c7_1390 Physcomitrium patens
Prupe.5G021100 Prunus persica
Psat2g142000 Pisum sativum
Psat4g108600 Pisum sativum
PSO782G0766 Papaver somniferum
QL12p000797 Quercus lobata
RcHm_v2.0_Chr7g0213351 Rosa chinensis
Rhsim07G0138600 Rhododendron simsii
Rhsim11G0025500 Rhododendron simsii
Sabra01G0101500 Salix brachista
Sabra03G0069800 Salix brachista
SalBow8G0073 Salvia bowleyana
Sc07g0008210 Simmondsia chinensis
Sc22g0002010 Simmondsia chinensis
Sed0011281 Sechium edule
Sed0011307 Sechium edule
SEGI_05328 Sequoiadendron giganteum
SEGI_20918 Sequoiadendron giganteum
SEGI_29780 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31366 Striga asiatica
SGA_v2.0_scaffold89G27404 Striga asiatica
SMO141G0193 Selaginella moellendorffii
Solyc08g005490.3 Solanum lycopersicum
Solyc08g075870.3 Solanum lycopersicum
Sopen08g001520 Solanum pennellii
Sopen08g024510 Solanum pennellii
Sp1g27560 Schrenkiella parvula
Sp7g17820 Schrenkiella parvula
TAR375G0334 Trochodendron aralioides
THA.LOC104798513 Tarenaya hassleriana
THA.LOC104811036 Tarenaya hassleriana
THA.LOC104812724 Tarenaya hassleriana
THA.LOC104814700 Tarenaya hassleriana
THA.LOC109116699 Tarenaya hassleriana
Thecc.03G317300 Theobroma cacao
Thhalv10007126m.g Eutrema salsugineum
Thhalv10024718m.g Eutrema salsugineum
TPR.G17244 Trifolium pratense
TPR.G31160 Trifolium pratense
TWI36G1360 Tripterygium wilfordii
TWI56G0436 Tripterygium wilfordii
unitig_32.g11626 Utricularia gibba
unitig_747.g21370 Utricularia gibba
unitig_747.g21923 Utricularia gibba
vmacro00065 Vaccinium macrocarpon
vmacro14233 Vaccinium macrocarpon
VMungo0251G1559 Vigna mungo
VMungo0251G2476 Vigna mungo
VMungo0251G2705 Vigna mungo
VMungo1215G1566 Vigna mungo
Zm00001eb025460 Zea mays

User provided reference genes

Program Settings