Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p36190 Brassica napus
A02p36200 Brassica napus
A03p60620 Brassica napus
A04p12440 Brassica napus
A04p12450 Brassica napus
A04p18700 Brassica napus
A06p40230 Brassica napus
A07p20090 Brassica napus
Aa31LG2G19060 Aethionema arabicum
Aa31LG2G4260 Aethionema arabicum
Aa31sc132G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3594 Anthoceros agrestis
Actinidia03337 Actinidia chinensis
Ah.11g044060 Amaranthus hybridus
AL3G21320 Arabidopsis lyrata
AL4G14780 Arabidopsis lyrata
AL5G18730 Arabidopsis lyrata
AL5G18770 Arabidopsis lyrata
AL5G18780 Arabidopsis lyrata
AL7G20770 Arabidopsis lyrata
AL7G50570 Arabidopsis lyrata
AL7G50580 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.UVU7SC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X54F5Q Arachis hypogaea
AT2G24390 Arabidopsis thaliana
AT3G28930 Arabidopsis thaliana
AT3G28940 Arabidopsis thaliana
AT3G28950 Arabidopsis thaliana
AT4G31310 Arabidopsis thaliana
AT5G39720 Arabidopsis thaliana
AT5G39730 Arabidopsis thaliana
ATR0626G165 Amborella trichopoda
Atru.chr7.2667 Acer truncatum
Atru.chr7.2687 Acer truncatum
Atru.chr7.2689 Acer truncatum
AUR62020646 Chenopodium quinoa
AUR62038733 Chenopodium quinoa
BcaB02g07971 Brassica carinata
BcaB06g27365 Brassica carinata
BcaB06g27368 Brassica carinata
BcaB07g30106 Brassica carinata
BcaB07g30107 Brassica carinata
BcaB07g30108 Brassica carinata
BcaC02g08465 Brassica carinata
BcaC02g08466 Brassica carinata
BcaC06g33657 Brassica carinata
BcaC06g33658 Brassica carinata
BcaC06g33659 Brassica carinata
BcaC08g44432 Brassica carinata
BcaNung01532 Brassica carinata
BolC2t11567H Brassica oleracea
BolC2t11568H Brassica oleracea
BolC4t26204H Brassica oleracea
BolC4t26205H Brassica oleracea
BolC4t26951H Brassica oleracea
BolC6t37078H Brassica oleracea
BolC7t44309H Brassica oleracea
BolC7t46307H Brassica oleracea
BraA02t08618Z Brassica rapa
BraA02t08619Z Brassica rapa
BraA03t15103Z Brassica rapa
BraA04t16907Z Brassica rapa
BraA04t17480Z Brassica rapa
BraA06t26938Z Brassica rapa
BraA07t29708Z Brassica rapa
C02p55170 Brassica napus
C02p55180 Brassica napus
C04p46200 Brassica napus
C04p46210 Brassica napus
C04p53990 Brassica napus
C06p18730 Brassica napus
C07p37870 Brassica napus
C07p58520 Brassica napus
C08p37820 Brassica napus
CAN.G480.18 Capsicum annuum
CAN.G940.6 Capsicum annuum
CANSAT25G1371 Cannabis sativa
CARHR117670 Cardamine hirsuta
CARHR152000 Cardamine hirsuta
CARHR152030 Cardamine hirsuta
CARHR239180 Cardamine hirsuta
CARHR262480 Cardamine hirsuta
Carub.0004s0371 Capsella rubella
Carub.0005s0750 Capsella rubella
Carub.0005s0751 Capsella rubella
Carub.0005s0752 Capsella rubella
Carub.0007s0925 Capsella rubella
Carub.0007s3615 Capsella rubella
Carub.0007s3616 Capsella rubella
Ca_15640_v3 Cicer arietinum L.
CBR_g3022 Chara braunii
CBR_g41790 Chara braunii
Cc06_g20070 Coffea canephora
CDE05G0090 Ceratophyllum demersum
Cfa013313 Carpinus fangiana
Cfa024036 Carpinus fangiana
Ciclev10009652m.g Citrus clementina
CiPaw.07G209800 Carya illinoinensis
ClCG05G026330 Citrullus lanatus
ClCG08G012510 Citrullus lanatus
ClCG08G012520 Citrullus lanatus
COL.COLO4_18627 Corchorus olitorius
Cpa.g.sc148.2 Carica papaya
Cre01.g019000 Chlamydomonas reinhardtii
CsaV3_2G031210 Cucumis sativus L.
CsaV3_2G031220 Cucumis sativus L.
CsaV3_3G047270 Cucumis sativus L.
CSS0035055 Camellia sinensis var. sinensis
CSS0039832 Camellia sinensis var. sinensis
CSS0042961 Camellia sinensis var. sinensis
DCAR_000672 Daucus carota
Dinv37494 Davidia involucrata
Duzib150G0693 Durio zibethinus
ECA240G2981 Erigeron canadensis
ECA246G3893 Erigeron canadensis
EL10Ac2g03693 Beta vulgaris
EL10As2g23243 Beta vulgaris
Eucgr.C03983 Eucalyptus grandis
FAN20G1725 Fragaria x ananassa
FAN27G1264 Fragaria x ananassa
FvH4_2g36470 Fragaria vesca
Glyma.04G077500 Glycine max
Glyma.06G078600 Glycine max
Gohir.A05G065200 Gossypium hirsutum
Gohir.A05G066100 Gossypium hirsutum
Gohir.D05G067800 Gossypium hirsutum
Gohir.D05G068500 Gossypium hirsutum
Gorai.009G068600 Gossypium raimondii
Gorai.009G069500 Gossypium raimondii
GSVIVG01035566001 Vitis vinifera
HanXRQChr13g0411851 Helianthus annuus
HanXRQChr17g0539281 Helianthus annuus
Haze_21801 Corylus avellana
Hma1.2p1_0331F.1_g127500 Hydrangea macrophylla
Hund03263 Selenicereus undatus
Lalb_Chr23g0269271 Lupinus albus
Lj1g0000796 Lotus japonicus
Lsat_1_v5_gn_3_26500 Lactuca sativa
Lsat_1_v5_gn_5_56481 Lactuca sativa
Manes.03G001200 Manihot esculenta
Mapoly0002s0016 Marchantia polymorpha
MBI13_g34298_MAGBIO Magnolia biondii
MCO14G098 Micromonas commoda
MD08G1124500 Malus domestica
MD15G1103200 Malus domestica
Medtr3g109200 Medicago truncatula
MELO3C003602.2 Cucumis melo
MELO3C011170.2 Cucumis melo
MELO3C011171.2 Cucumis melo
MELO3C030364.2 Cucumis melo
Migut.A00454 Erythranthe guttata
MSTRG.13935 Avicennia marina
Nitab4.5_0000860g0140 Nicotiana tabacum
Nitab4.5_0000970g0120 Nicotiana tabacum
Nitab4.5_0001942g0150 Nicotiana tabacum
Nitab4.5_0004859g0080 Nicotiana tabacum
Nn8g41106 Nelumbo nucifera
Oeu002015.1 Olea europaea
Os02g0141000 Oryza sativa ssp. japonica
Os06g0702700 Oryza sativa ssp. japonica
Peaxi162Scf00045g00147 Petunia axillaris
Peaxi162Scf00213g00937 Petunia axillaris
PGR044G1430 Punica granatum
PGSC0003DMG400014847 Solanum tuberosum
PGSC0003DMG400029585 Solanum tuberosum
Phvul.009G103500 Phaseolus vulgaris
Potri.006G278900 Populus trichocarpa
Potri.018G003000 Populus trichocarpa
Pp3c23_4560 Physcomitrium patens
Prupe.1G456100 Prunus persica
Psat5g024600 Pisum sativum
PSO063G0761 Papaver somniferum
PSO063G2312 Papaver somniferum
PSO063G6138 Papaver somniferum
PSO170G0284 Papaver somniferum
PSO170G5630 Papaver somniferum
QL12p025851 Quercus lobata
RcHm_v2.0_Chr6g0305411 Rosa chinensis
Rhsim09G0032200 Rhododendron simsii
RhsimUnG0033300 Rhododendron simsii
Sabra18G0003000 Salix brachista
Sabra18G0006400 Salix brachista
Sabra18G0006700 Salix brachista
SalBow8G0292 Salvia bowleyana
SalBow8G1816 Salvia bowleyana
SalBow8G4026 Salvia bowleyana
Sc09g0007410 Simmondsia chinensis
Sed0000194 Sechium edule
Sed0007325 Sechium edule
Sed0007369 Sechium edule
SEGI_16291 Sequoiadendron giganteum
SEGI_16865 Sequoiadendron giganteum
SGA_v2.0_scaffold54G19474 Striga asiatica
SMO169G0129 Selaginella moellendorffii
SMO202G0024 Selaginella moellendorffii
Solyc08g069232.1 Solanum lycopersicum
Sopen08g002040 Solanum pennellii
Sopen08g022870 Solanum pennellii
Sp2g17570 Schrenkiella parvula
Sp2g17580 Schrenkiella parvula
Sp2g17590 Schrenkiella parvula
Sp2g17600 Schrenkiella parvula
Sp4g03410 Schrenkiella parvula
Sp7g02280 Schrenkiella parvula
Sp7g02290 Schrenkiella parvula
Sp7g29160 Schrenkiella parvula
TAR383G0132 Trochodendron aralioides
TAR383G0526 Trochodendron aralioides
TAR383G0898 Trochodendron aralioides
THA.LOC104803587 Tarenaya hassleriana
THA.LOC104803885 Tarenaya hassleriana
THA.LOC104823137 Tarenaya hassleriana
THA.LOC104823908 Tarenaya hassleriana
Thecc.09G002700 Theobroma cacao
Thhalv10000361m.g Eutrema salsugineum
Thhalv10005031m.g Eutrema salsugineum
Thhalv10005032m.g Eutrema salsugineum
Thhalv10005034m.g Eutrema salsugineum
Thhalv10005041m.g Eutrema salsugineum
Thhalv10026383m.g Eutrema salsugineum
Thhalv10027966m.g Eutrema salsugineum
Thhalv10027971m.g Eutrema salsugineum
TPR.G12385 Trifolium pratense
TWI36G0183 Tripterygium wilfordii
TWI63G0337 Tripterygium wilfordii
unitig_37.g12911 Utricularia gibba
vmacro00588 Vaccinium macrocarpon
VMungo1309G1731 Vigna mungo
Zm00001eb227130 Zea mays
Zm00001eb232110 Zea mays

User provided reference genes

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