Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p23560 Brassica napus
A09p32420 Brassica napus
Aa31LG6G15840 Aethionema arabicum
Aa31LG6G8270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2678 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.694 Anthoceros agrestis
Actinidia04744 Actinidia chinensis
Actinidia28450 Actinidia chinensis
Ah.03g141780 Amaranthus hybridus
Ah.16g110380 Amaranthus hybridus
AL1G48570 Arabidopsis lyrata
AL7G11460 Arabidopsis lyrata
AL7G13430 Arabidopsis lyrata
Aqoxy6G00429 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.98KMWL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0AW3A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0AYET Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q6E8UI Arachis hypogaea
AT1G34065 Arabidopsis thaliana
AT4G39460 Arabidopsis thaliana
ATR1120G004 Amborella trichopoda
Atru.chr13.1999 Acer truncatum
Atru.chr4.459 Acer truncatum
AUR62003290 Chenopodium quinoa
AUR62026632 Chenopodium quinoa
AUR62027171 Chenopodium quinoa
AUR62034889 Chenopodium quinoa
BcaB03g12284 Brassica carinata
BcaB07g33032 Brassica carinata
BcaC01g00292 Brassica carinata
BcaC08g43813 Brassica carinata
BolC3t20048H Brassica oleracea
BolC6t36332H Brassica oleracea
BraA08t34313Z Brassica rapa
BraA09t38782Z Brassica rapa
C03p77870 Brassica napus
C06p11960 Brassica napus
CAN.G1044.5 Capsicum annuum
CAN.G26.41 Capsicum annuum
CANSAT01G0889 Cannabis sativa
CANSAT25G0838 Cannabis sativa
CANSAT25G2567 Cannabis sativa
CARHR033460 Cardamine hirsuta
CARHR247280 Cardamine hirsuta
Carub.0001s3216 Capsella rubella
Carub.0007s0135 Capsella rubella
Ca_10661_v3 Cicer arietinum L.
Ca_17684_v3 Cicer arietinum L.
CBR_g19083 Chara braunii
CBR_g8633 Chara braunii
Cc07_g16550 Coffea canephora
Cc09_g06620 Coffea canephora
CDE02G0550 Ceratophyllum demersum
Cfa018278 Carpinus fangiana
Ciclev10001842m.g Citrus clementina
Ciclev10021207m.g Citrus clementina
CiPaw.03G132700 Carya illinoinensis
CiPaw.04G089900 Carya illinoinensis
ClCG02G000940 Citrullus lanatus
ClCG08G007350 Citrullus lanatus
COL.COLO4_13744 Corchorus olitorius
COL.COLO4_22362 Corchorus olitorius
Cpa.g.sc26.100 Carica papaya
Cpa.g.sc72.6 Carica papaya
Cre06.g286250 Chlamydomonas reinhardtii
Cre09.g396350 Chlamydomonas reinhardtii
Cre16.g688000 Chlamydomonas reinhardtii
CsaV3_2G017750 Cucumis sativus L.
CsaV3_6G005000 Cucumis sativus L.
CSS0025008 Camellia sinensis var. sinensis
CSS0036480 Camellia sinensis var. sinensis
DCAR_001190 Daucus carota
DCAR_001381 Daucus carota
Dinv19464 Davidia involucrata
Dinv41032 Davidia involucrata
Duzib041G0180 Durio zibethinus
Duzib187G1800 Durio zibethinus
ECA233G3823 Erigeron canadensis
ECA246G2724 Erigeron canadensis
EL10Ac1g01608 Beta vulgaris
EL10Ac6g14779 Beta vulgaris
Eucgr.F04181 Eucalyptus grandis
Eucgr.H04887 Eucalyptus grandis
FAN15G0382 Fragaria x ananassa
FAN19G3140 Fragaria x ananassa
FAN20G2882 Fragaria x ananassa
FAN23G1812 Fragaria x ananassa
FAN24G3276 Fragaria x ananassa
FAN26G2140 Fragaria x ananassa
FAN26G2699 Fragaria x ananassa
FAN27G0517 Fragaria x ananassa
FvH4_1g23000 Fragaria vesca
FvH4_2g12990 Fragaria vesca
Glyma.05G185200 Glycine max
Glyma.08G143100 Glycine max
Glyma.10G221300 Glycine max
Glyma.20G170250 Glycine max
Gohir.A05G246600 Gossypium hirsutum
Gohir.A12G083322 Gossypium hirsutum
Gohir.D05G248100 Gossypium hirsutum
Gohir.D12G093000 Gossypium hirsutum
Gorai.008G100700 Gossypium raimondii
Gorai.009G259000 Gossypium raimondii
GSVIVG01001423001 Vitis vinifera
GSVIVG01022254001 Vitis vinifera
HanXRQChr10g0278651 Helianthus annuus
HanXRQChr12g0368401 Helianthus annuus
Haze_17816 Corylus avellana
Haze_25066 Corylus avellana
Hma1.2p1_0678F.1_g202040 Hydrangea macrophylla
HPP92_000636 Vanilla planifolia
Hund03522 Selenicereus undatus
Hund17484 Selenicereus undatus
Lalb_Chr02g0141591 Lupinus albus
Lalb_Chr07g0184711 Lupinus albus
Lj4C863G12 Lonicera japonica
Lj4g0024845 Lotus japonicus
Lj5g0018271 Lotus japonicus
Lj7A346T28 Lonicera japonica
Lsat_1_v5_gn_6_101420 Lactuca sativa
Lsat_1_v5_gn_8_22921 Lactuca sativa
Manes.02G183700 Manihot esculenta
Manes.12G144500 Manihot esculenta
Mapoly0013s0203 Marchantia polymorpha
Mapoly0068s0095 Marchantia polymorpha
MCO01G171 Micromonas commoda
MCO01G472 Micromonas commoda
MCO16G122 Micromonas commoda
MCO16G639 Micromonas commoda
MD04G1037000 Malus domestica
MD05G1033900 Malus domestica
Medtr1g097890 Medicago truncatula
Medtr8g092080 Medicago truncatula
MELO3C019978.2 Cucumis melo
MELO3C020966.2 Cucumis melo
Migut.C00141 Erythranthe guttata
Migut.H02449 Erythranthe guttata
MSTRG.23306 Avicennia marina
Nitab4.5_0000184g0130 Nicotiana tabacum
Nitab4.5_0006843g0030 Nicotiana tabacum
Nitab4.5_0009050g0060 Nicotiana tabacum
Nn1g05098 Nelumbo nucifera
Nn1g05997 Nelumbo nucifera
Nn5g28842 Nelumbo nucifera
Nn6g32111 Nelumbo nucifera
Nn6g33374 Nelumbo nucifera
Oeu002073.1 Olea europaea
Oeu027199.1 Olea europaea
Oeu028511.1 Olea europaea
Os05g0361900 Oryza sativa ssp. japonica
Os07g0295000 Oryza sativa ssp. japonica
Peaxi162Scf00106g01124 Petunia axillaris
Peaxi162Scf00160g01743 Petunia axillaris
PGR102G1343 Punica granatum
PGR102G1615 Punica granatum
PGSC0003DMG400020962 Solanum tuberosum
PGSC0003DMG400026833 Solanum tuberosum
PGSC0003DMG401018790 Solanum tuberosum
PGSC0003DMG403031202 Solanum tuberosum
Phvul.002G266200 Phaseolus vulgaris
Phvul.007G083700 Phaseolus vulgaris
Potri.002G063901 Populus trichocarpa
Potri.005G085900 Populus trichocarpa
Potri.005G197200 Populus trichocarpa
Pp3c12_10690 Physcomitrium patens
Pp3c1_10080 Physcomitrium patens
Pp3c23_3900 Physcomitrium patens
PRCOL_00005214 Prasinoderma coloniale
PRCOL_00007059 Prasinoderma coloniale
Prupe.6G168500 Prunus persica
Prupe.8G041700 Prunus persica
Psat0s1661g0160 Pisum sativum
Psat7g050240 Pisum sativum
PSO541G1074 Papaver somniferum
PSO675G9080 Papaver somniferum
QL02p037396 Quercus lobata
QL02p037883 Quercus lobata
QL06p031637 Quercus lobata
RcHm_v2.0_Chr2g0116801 Rosa chinensis
RcHm_v2.0_Chr2g0116971 Rosa chinensis
RcHm_v2.0_Chr2g0117311 Rosa chinensis
RcHm_v2.0_Chr2g0117551 Rosa chinensis
RcHm_v2.0_Chr2g0117651 Rosa chinensis
RcHm_v2.0_Chr5g0051511 Rosa chinensis
RcHm_v2.0_Chr5g0051521 Rosa chinensis
RcHm_v2.0_Chr5g0051531 Rosa chinensis
RcHm_v2.0_Chr6g0274151 Rosa chinensis
Rhsim10G0148000 Rhododendron simsii
Rhsim11G0088100 Rhododendron simsii
Sabra05G0070900 Salix brachista
Sabra05G0150200 Salix brachista
SalBow6G6002 Salvia bowleyana
Sc03g0004500 Simmondsia chinensis
Sed0004876 Sechium edule
Sed0008030 Sechium edule
Sed0019862 Sechium edule
SEGI_03674 Sequoiadendron giganteum
SEGI_05478 Sequoiadendron giganteum
SEGI_20262 Sequoiadendron giganteum
SEGI_28517 Sequoiadendron giganteum
SGA_v2.0_scaffold133G34660 Striga asiatica
SGA_v2.0_scaffold51G18760 Striga asiatica
SHI11773 Sapria himalayana
SHI11775 Sapria himalayana
SHI11776 Sapria himalayana
SHI11780 Sapria himalayana
SMO118G0390 Selaginella moellendorffii
Solyc04g051580.4 Solanum lycopersicum
Solyc12g056660.3 Solanum lycopersicum
Sopen04g022930 Solanum pennellii
Sopen12g029320 Solanum pennellii
Sp1g29340 Schrenkiella parvula
Sp7g36430 Schrenkiella parvula
TAR628G0434 Trochodendron aralioides
THA.LOC104804136 Tarenaya hassleriana
THA.LOC104816012 Tarenaya hassleriana
Thecc.01G115800 Theobroma cacao
Thecc.08G160200 Theobroma cacao
Thhalv10008712m.g Eutrema salsugineum
Thhalv10025614m.g Eutrema salsugineum
TPR.G17055 Trifolium pratense
TPR.G2249 Trifolium pratense
TPR.G40236 Trifolium pratense
TWI60G1195 Tripterygium wilfordii
TWI79G0076 Tripterygium wilfordii
unitig_736.g22629 Utricularia gibba
vmacro01497 Vaccinium macrocarpon
vmacro01498 Vaccinium macrocarpon
vmacro12887 Vaccinium macrocarpon
vmacro12888 Vaccinium macrocarpon
VMungo0251G2581 Vigna mungo
VMungo0720G0993 Vigna mungo
Zm00001eb253620 Zea mays
Zm00001eb305450 Zea mays

User provided reference genes

Program Settings