Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p09850 Brassica napus
A07p09860 Brassica napus
A07p09870 Brassica napus
A07p09880 Brassica napus
A07p09890 Brassica napus
A07p09900 Brassica napus
A08p11090 Brassica napus
A09p35890 Brassica napus
A10p06940 Brassica napus
Aa31LG3G17380 Aethionema arabicum
Aa31LG6G11790 Aethionema arabicum
Aa31sc108G110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3050 Anthoceros agrestis
Actinidia22637 Actinidia chinensis
Actinidia28066 Actinidia chinensis
Ah.04g151790 Amaranthus hybridus
AL1G44590 Arabidopsis lyrata
AL1G52900 Arabidopsis lyrata
AL3G21190 Arabidopsis lyrata
Aqoxy1G01929 Aquilegia oxysepala
Aqoxy3G03398 Aquilegia oxysepala
Aqoxy6G01308 Aquilegia oxysepala
Aqoxy7G03290 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.191BIJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RR4AU3 Arachis hypogaea
AT1G30545 Arabidopsis thaliana
AT1G30550 Arabidopsis thaliana
AT1G45231 Arabidopsis thaliana
ATR0580G161 Amborella trichopoda
ATR0693G267 Amborella trichopoda
Atru.chr13.705 Acer truncatum
AUR62024450 Chenopodium quinoa
AUR62026039 Chenopodium quinoa
BcaB03g13824 Brassica carinata
BcaB04g18211 Brassica carinata
BcaB07g32667 Brassica carinata
BcaB07g32693 Brassica carinata
BcaB07g33872 Brassica carinata
BcaC05g27076 Brassica carinata
BcaC07g37812 Brassica carinata
BcaC08g42900 Brassica carinata
BolC6t35275H Brassica oleracea
BolC7t42012H Brassica oleracea
BolC7t42013H Brassica oleracea
BolC8t48201H Brassica oleracea
BraA07t28773Z Brassica rapa
BraA07t28775Z Brassica rapa
BraA08t33103Z Brassica rapa
BraA09t39114Z Brassica rapa
BraA10t42944Z Brassica rapa
C06p01230 Brassica napus
C06p01330 Brassica napus
C07p15070 Brassica napus
C07p15090 Brassica napus
C07p31540 Brassica napus
CAN.G1337.32 Capsicum annuum
CAN.G523.91 Capsicum annuum
CARHR029960 Cardamine hirsuta
CARHR029990 Cardamine hirsuta
CARHR030000 Cardamine hirsuta
CARHR036360 Cardamine hirsuta
Carub.0001s2881 Capsella rubella
Carub.0001s3565 Capsella rubella
Ca_13288_v3 Cicer arietinum L.
CBR_g31153 Chara braunii
Cc00_g35270 Coffea canephora
Cc02_g21780 Coffea canephora
Cc03_g11760 Coffea canephora
Cc10_g04490 Coffea canephora
Cc11_g00830 Coffea canephora
CDE08G1106 Ceratophyllum demersum
Cfa001840 Carpinus fangiana
Cfa018087 Carpinus fangiana
Ciclev10000309m.g Citrus clementina
CiPaw.01G257000 Carya illinoinensis
CiPaw.16G042700 Carya illinoinensis
CiPaw.16G042800 Carya illinoinensis
ClCG05G019930 Citrullus lanatus
COL.COLO4_26521 Corchorus olitorius
Cpa.g.sc49.28 Carica papaya
Cre06.g290800 Chlamydomonas reinhardtii
CsaV3_4G034370 Cucumis sativus L.
CSS0007533 Camellia sinensis var. sinensis
CSS0021141 Camellia sinensis var. sinensis
CSS0045214 Camellia sinensis var. sinensis
DCAR_001797 Daucus carota
DCAR_019447 Daucus carota
Dinv24211 Davidia involucrata
Dinv35951 Davidia involucrata
Duzib041G0245 Durio zibethinus
Duzib116G0700 Durio zibethinus
Duzib192G0115 Durio zibethinus
ECA232G2977 Erigeron canadensis
ECA232G3673 Erigeron canadensis
ECA233G2685 Erigeron canadensis
ECA236G3008 Erigeron canadensis
ECA236G4984 Erigeron canadensis
ECA238G2075 Erigeron canadensis
ECA238G2077 Erigeron canadensis
ECA238G2325 Erigeron canadensis
ECA238G2469 Erigeron canadensis
ECA238G2853 Erigeron canadensis
ECA240G0284 Erigeron canadensis
ECA240G0378 Erigeron canadensis
ECA240G1676 Erigeron canadensis
ECA240G2231 Erigeron canadensis
ECA240G2291 Erigeron canadensis
ECA240G3696 Erigeron canadensis
ECA246G1168 Erigeron canadensis
ECA246G2064 Erigeron canadensis
ECA246G2450 Erigeron canadensis
ECA246G4764 Erigeron canadensis
ECA247G1728 Erigeron canadensis
ECA247G2282 Erigeron canadensis
ECA247G3527 Erigeron canadensis
ECA248G2067 Erigeron canadensis
EL10Ac6g14533 Beta vulgaris
Eucgr.F02335 Eucalyptus grandis
Eucgr.J03135 Eucalyptus grandis
FAN02G0631 Fragaria x ananassa
FAN14G5560 Fragaria x ananassa
FAN15G2685 Fragaria x ananassa
FAN20G0187 Fragaria x ananassa
FAN24G2459 Fragaria x ananassa
FAN27G0977 Fragaria x ananassa
FvH4_2g34310 Fragaria vesca
FvH4_6g28100 Fragaria vesca
Glyma.14G083400 Glycine max
Glyma.17G241702 Glycine max
Gohir.A06G019000 Gossypium hirsutum
Gohir.A10G000650 Gossypium hirsutum
Gohir.D06G017400 Gossypium hirsutum
Gohir.D10G000801 Gossypium hirsutum
Gorai.010G020300 Gossypium raimondii
GSVIVG01009483001 Vitis vinifera
GSVIVG01016089001 Vitis vinifera
HanXRQChr09g0267541 Helianthus annuus
HanXRQChr11g0336881 Helianthus annuus
Haze_16699 Corylus avellana
Hma1.2p1_0217F.1_g091780 Hydrangea macrophylla
Hma1.2p1_0217F.1_g091790 Hydrangea macrophylla
Hma1.2p1_0360F.1_g135570 Hydrangea macrophylla
Hma1.2p1_0718F.1_g208280 Hydrangea macrophylla
Hma1.2p1_2046F.1_g312420 Hydrangea macrophylla
HPP92_010746 Vanilla planifolia
HPP92_011179 Vanilla planifolia
Hund19148 Selenicereus undatus
Lalb_Chr14g0368631 Lupinus albus
Lalb_Chr22g0355081 Lupinus albus
Lj5g0008284 Lotus japonicus
Lj9A319T61 Lonicera japonica
Lsat_1_v5_gn_4_126480 Lactuca sativa
Lsat_1_v5_gn_7_81160 Lactuca sativa
Manes.18G038100 Manihot esculenta
Mapoly0102s0034 Marchantia polymorpha
MBI06_g02569_MAGBIO Magnolia biondii
MBI14_g16434_MAGBIO Magnolia biondii
MCO01G346 Micromonas commoda
MD08G1099000 Malus domestica
MD08G1099100 Malus domestica
MD15G1081500 Malus domestica
MD15G1081600 Malus domestica
MD17G1227900 Malus domestica
MD17G1228200 Malus domestica
Medtr1g019290 Medicago truncatula
MELO3C016758.2 Cucumis melo
Migut.B00630 Erythranthe guttata
Migut.C00571 Erythranthe guttata
MSTRG.25085 Avicennia marina
MSTRG.25086 Avicennia marina
Nitab4.5_0001580g0090 Nicotiana tabacum
Nitab4.5_0002865g0130 Nicotiana tabacum
Nitab4.5_0003091g0020 Nicotiana tabacum
Nitab4.5_0003434g0100 Nicotiana tabacum
Nn5g30284 Nelumbo nucifera
Nn8g40126 Nelumbo nucifera
Oeu018403.1 Olea europaea
Oeu049988.1 Olea europaea
Os03g0396900 Oryza sativa ssp. japonica
Os06g0187100 Oryza sativa ssp. japonica
Peaxi162Scf00001g00315 Petunia axillaris
Peaxi162Scf01073g00028 Petunia axillaris
PGR031G1159 Punica granatum
PGR031G1312 Punica granatum
PGR031G2120 Punica granatum
PGR031G3752 Punica granatum
PGSC0003DMG400012593 Solanum tuberosum
PGSC0003DMG400015440 Solanum tuberosum
Phvul.001G022600 Phaseolus vulgaris
Potri.014G028000 Populus trichocarpa
Pp3c22_18570 Physcomitrium patens
PRCOL_00002416 Prasinoderma coloniale
Prupe.1G434300 Prunus persica
Prupe.3G105200 Prunus persica
Psat6g013040 Pisum sativum
PSO063G1229 Papaver somniferum
PSO541G6107 Papaver somniferum
PSO675G4742 Papaver somniferum
PSO782G1174 Papaver somniferum
QL02p004661 Quercus lobata
QL09p042296 Quercus lobata
QL09p042313 Quercus lobata
RcHm_v2.0_Chr2g0132081 Rosa chinensis
RcHm_v2.0_Chr2g0167871 Rosa chinensis
RcHm_v2.0_Chr6g0308051 Rosa chinensis
Rhsim05G0109400 Rhododendron simsii
Rhsim06G0050900 Rhododendron simsii
Sabra14G0019100 Salix brachista
SalBow7G4374 Salvia bowleyana
Sc15g0006080 Simmondsia chinensis
Sed0005207 Sechium edule
SEGI_20938 Sequoiadendron giganteum
SGA_v2.0_scaffold203G41549 Striga asiatica
SGA_v2.0_scaffold332G48950 Striga asiatica
SHI08266 Sapria himalayana
SMO364G0937 Selaginella moellendorffii
Solyc01g104990.4 Solanum lycopersicum
Solyc12g088810.3 Solanum lycopersicum
Sopen01g047510 Solanum pennellii
Sopen12g030700 Solanum pennellii
Sp1g26420 Schrenkiella parvula
Sp1g34080 Schrenkiella parvula
TAR381G0416 Trochodendron aralioides
THA.LOC104813228 Tarenaya hassleriana
Thecc.06G048500 Theobroma cacao
Thecc.08G005700 Theobroma cacao
Thhalv10008708m.g Eutrema salsugineum
Thhalv10022632m.g Eutrema salsugineum
TPR.G3810 Trifolium pratense
TWI56G1062 Tripterygium wilfordii
unitig_26.g9814 Utricularia gibba
vmacro19920 Vaccinium macrocarpon
vmacro21514 Vaccinium macrocarpon
Zm00001eb019330 Zea mays
Zm00001eb374430 Zea mays

User provided reference genes

Program Settings