Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15810 Brassica napus
A08p33790 Brassica napus
A09p64660 Brassica napus
Aa31LG1G4070 Aethionema arabicum
Aa31LG4G9550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.2092 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.2093 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.756 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3722 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4529 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.4 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.5 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1797 Anthoceros agrestis
Actinidia15071 Actinidia chinensis
Actinidia37411 Actinidia chinensis
Ah.02g130140 Amaranthus hybridus
Ah.03g133220 Amaranthus hybridus
AL1G21690 Arabidopsis lyrata
AL7G28770 Arabidopsis lyrata
Aqoxy3G02840 Aquilegia oxysepala
Aqoxy6G00668_Aqoxy6G00669 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.52KDTF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.90XW7L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HM29ET Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N2L19B Arachis hypogaea
AT1G10760 Arabidopsis thaliana
AT4G24450 Arabidopsis thaliana
ATR0767G073 Amborella trichopoda
ATR1152G017 Amborella trichopoda
Atru.chr11.2087 Acer truncatum
Atru.chr13.974 Acer truncatum
AUR62005429 Chenopodium quinoa
AUR62014090 Chenopodium quinoa
BcaB08g37373 Brassica carinata
BcaC06g34403 Brassica carinata
BcaC07g38588 Brassica carinata
BcaC07g38627 Brassica carinata
BcaC09g50867 Brassica carinata
BcaC09g50868 Brassica carinata
BcaNung06799 Brassica carinata
BolC1t01904H Brassica oleracea
BolC8t49029H Brassica oleracea
BolC8t52392H Brassica oleracea
BraA01t01516Z Brassica rapa
BraA07t30432Z Brassica rapa
BraA08t35295Z Brassica rapa
BraA09t41826Z Brassica rapa
C01p19760 Brassica napus
C01p31290 Brassica napus
C04p15580 Brassica napus
C08p13950 Brassica napus
C08p48530 Brassica napus
CAN.G447.9 Capsicum annuum
CANSAT01G0055 Cannabis sativa
CARHR010980 Cardamine hirsuta
CARHR231840 Cardamine hirsuta
Carub.0001s1031 Capsella rubella
Carub.0007s1662 Capsella rubella
Ca_22500_v3 Cicer arietinum L.
CBR_g12420 Chara braunii
CBR_g39013 Chara braunii
Cc11_g15490 Coffea canephora
CDE04G1797 Ceratophyllum demersum
CDE04G3375 Ceratophyllum demersum
CDE04G3560 Ceratophyllum demersum
CDE06G0295 Ceratophyllum demersum
Cfa009191 Carpinus fangiana
Ciclev10017434m.g Citrus clementina
Ciclev10030499m.g Citrus clementina
CiPaw.05G184800 Carya illinoinensis
CiPaw.07G163000 Carya illinoinensis
ClCG05G025580 Citrullus lanatus
COL.COLO4_24234 Corchorus olitorius
COL.COLO4_35285 Corchorus olitorius
Cpa.g.sc69.90 Carica papaya
Cre07.g319300 Chlamydomonas reinhardtii
Cre07.g319340 Chlamydomonas reinhardtii
Cre07.g332300 Chlamydomonas reinhardtii
Cre07.g333252 Chlamydomonas reinhardtii
Cre08.g363874 Chlamydomonas reinhardtii
CsaV3_5G031320 Cucumis sativus L.
CSS0021224 Camellia sinensis var. sinensis
CSS0046721 Camellia sinensis var. sinensis
DCAR_007066 Daucus carota
DCAR_007067 Daucus carota
DCAR_029738 Daucus carota
DCAR_031129 Daucus carota
Dinv15253 Davidia involucrata
Dinv24813 Davidia involucrata
Dinv42591 Davidia involucrata
Duzib041G0627 Durio zibethinus
Duzib268G0758 Durio zibethinus
ECA233G2601 Erigeron canadensis
ECA234G4650 Erigeron canadensis
EL10Ac6g13726 Beta vulgaris
Eucgr.H02531 Eucalyptus grandis
FAN04G2482 Fragaria x ananassa
FAN07G2766 Fragaria x ananassa
FAN12G2701 Fragaria x ananassa
FAN12G3618 Fragaria x ananassa
FAN17G2901 Fragaria x ananassa
FAN22G0388 Fragaria x ananassa
FvH4_4g25800 Fragaria vesca
FvH4_5g34193 Fragaria vesca
Glyma.04G096500 Glycine max
Glyma.06G098200 Glycine max
Glyma.08G283700 Glycine max
Glyma.18G142500 Glycine max
Gohir.A01G159900 Gossypium hirsutum
Gohir.A01G159950 Gossypium hirsutum
Gohir.A05G216400 Gossypium hirsutum
Gohir.A12G144400 Gossypium hirsutum
Gohir.D01G150200 Gossypium hirsutum
Gohir.D05G221000 Gossypium hirsutum
Gohir.D12G149000 Gossypium hirsutum
Gorai.002G186200 Gossypium raimondii
Gorai.008G160400 Gossypium raimondii
Gorai.009G228100 Gossypium raimondii
GSVIVG01013806001 Vitis vinifera
HanXRQChr03g0093361 Helianthus annuus
HanXRQChr09g0264681 Helianthus annuus
HanXRQChr12g0371851 Helianthus annuus
HanXRQChr12g0384161 Helianthus annuus
HanXRQChr17g0547611 Helianthus annuus
HanXRQChr17g0547621 Helianthus annuus
Haze_12225 Corylus avellana
Hma1.2p1_0125F.1_g058690 Hydrangea macrophylla
Hma1.2p1_0223F.1_g094185 Hydrangea macrophylla
HPP92_003084 Vanilla planifolia
Hund06013 Selenicereus undatus
Hund25378 Selenicereus undatus
Hund25379 Selenicereus undatus
Lalb_Chr09g0334851 Lupinus albus
Lalb_Chr09g0334861 Lupinus albus
Lalb_Chr09g0334871 Lupinus albus
Lalb_Chr16g0392241 Lupinus albus
Lalb_Chr23g0269941 Lupinus albus
Lj4A85G31 Lonicera japonica
Lj4A85G32 Lonicera japonica
Lj4g0012667 Lotus japonicus
Lj6C809G13 Lonicera japonica
Lsat_1_v5_gn_4_4920 Lactuca sativa
Lsat_1_v5_gn_8_153980 Lactuca sativa
Manes.05G189000 Manihot esculenta
Manes.13G026800 Manihot esculenta
Mapoly0038s0029 Marchantia polymorpha
Mapoly0046s0022 Marchantia polymorpha
Mapoly0046s0023 Marchantia polymorpha
MBI16_g14597_MAGBIO Magnolia biondii
MBI16_g27903_MAGBIO Magnolia biondii
MCO02G032 Micromonas commoda
MCO06G074 Micromonas commoda
MCO07G158 Micromonas commoda
MCO16G440 Micromonas commoda
MD08G1203800 Malus domestica
MD13G1096800 Malus domestica
MD16G1097800 Malus domestica
Medtr8g069760 Medicago truncatula
MELO3C011972.2 Cucumis melo
Migut.L01476 Erythranthe guttata
MSTRG.577 Avicennia marina
MSTRG.7915 Avicennia marina
Nitab4.5_0002255g0040 Nicotiana tabacum
Nitab4.5_0007943g0010 Nicotiana tabacum
Nn4g22680 Nelumbo nucifera
Nn5g29817 Nelumbo nucifera
Oeu038612.1 Olea europaea
Os06g0474866 Oryza sativa ssp. japonica
Os06g0498400 Oryza sativa ssp. japonica
Peaxi162Scf00515g00133 Petunia axillaris
PGR119G2090 Punica granatum
PGSC0003DMG400007677 Solanum tuberosum
Phvul.003G062900 Phaseolus vulgaris
Potri.008G188150 Populus trichocarpa
Potri.010G044100 Populus trichocarpa
Pp3c3_11200 Physcomitrium patens
Pp3c8_6520 Physcomitrium patens
Pp3c8_6536 Physcomitrium patens
PRCOL_00000768 Prasinoderma coloniale
PRCOL_00006458 Prasinoderma coloniale
Prupe.1G248900 Prunus persica
Prupe.1G536100 Prunus persica
Psat4g114200 Pisum sativum
Psat4g114240 Pisum sativum
PSO063G5092 Papaver somniferum
PSO675G6980 Papaver somniferum
PSO832G0819 Papaver somniferum
QL03p058693 Quercus lobata
QL09p018643 Quercus lobata
RcHm_v2.0_Chr2g0129611 Rosa chinensis
RcHm_v2.0_Chr4g0433251 Rosa chinensis
RcHm_v2.0_Chr6g0270131 Rosa chinensis
RcHm_v2.0_Chr7g0233431 Rosa chinensis
RcHm_v2.0_Chr7g0233791 Rosa chinensis
RcHm_v2.0_Chr7g0233921 Rosa chinensis
RcHm_v2.0_Chr7g0234231 Rosa chinensis
RcHm_v2.0_Chr7g0234461 Rosa chinensis
Rhsim07G0213400 Rhododendron simsii
Rhsim12G0042000 Rhododendron simsii
Rhsim12G0113000 Rhododendron simsii
Sabra08G0142500 Salix brachista
Sabra10G0023900 Salix brachista
SalBow2G1604 Salvia bowleyana
Sc04g0009380 Simmondsia chinensis
Sed0006405 Sechium edule
Sed0024840 Sechium edule
SEGI_12281 Sequoiadendron giganteum
SEGI_25233 Sequoiadendron giganteum
SEGI_32533 Sequoiadendron giganteum
SEGI_33023 Sequoiadendron giganteum
SGA_v2.0_scaffold228G43260 Striga asiatica
SMO069G0004 Selaginella moellendorffii
SMO133G0036 Selaginella moellendorffii
SMO347G0598 Selaginella moellendorffii
Solyc05g005020.4 Solanum lycopersicum
Sopen05g001030 Solanum pennellii
Sp1g09460 Schrenkiella parvula
Sp7g22430 Schrenkiella parvula
TAR374G1700 Trochodendron aralioides
TAR622G0036 Trochodendron aralioides
TAR628G1058 Trochodendron aralioides
THA.LOC104799855 Tarenaya hassleriana
THA.LOC104823655 Tarenaya hassleriana
Thecc.02G256300 Theobroma cacao
Thecc.08G073900 Theobroma cacao
Thhalv10006565m.g Eutrema salsugineum
Thhalv10024230m.g Eutrema salsugineum
TPR.G23137 Trifolium pratense
TWI18G0188 Tripterygium wilfordii
TWI75G1447 Tripterygium wilfordii
unitig_26.g10358 Utricularia gibba
vmacro01143 Vaccinium macrocarpon
vmacro04624 Vaccinium macrocarpon
vmacro04634 Vaccinium macrocarpon
vmacro16213 Vaccinium macrocarpon
VMungo0251G0184 Vigna mungo
Zm00001eb278140 Zea mays

User provided reference genes

Program Settings