Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02550 Brassica napus
A09p11710 Brassica napus
Aa31LG6G13110 Aethionema arabicum
Aa31LG8G15260 Aethionema arabicum
Aa31LG8G15270 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1387 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.1388 Anthoceros agrestis
Actinidia21943 Actinidia chinensis
Actinidia21944 Actinidia chinensis
Actinidia31016 Actinidia chinensis
Ah.03g141340 Amaranthus hybridus
Ah.14g080530 Amaranthus hybridus
Ah.14g080590 Amaranthus hybridus
AL3G51270 Arabidopsis lyrata
AL7G14840 Arabidopsis lyrata
Aqoxy5G01496 Aquilegia oxysepala
Aqoxy6G02389 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.A2FF76 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E8YRIM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FJTX8M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G24WC3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K7AB56 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W54CWJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z4JI4R Arachis hypogaea
AT2G18100 Arabidopsis thaliana
AT4G36210 Arabidopsis thaliana
ATR0661G161 Amborella trichopoda
Atru.chr13.361 Acer truncatum
Atru.chr3.764 Acer truncatum
AUR62007649 Chenopodium quinoa
AUR62014432 Chenopodium quinoa
AUR62014433 Chenopodium quinoa
AUR62034565 Chenopodium quinoa
BcaB02g06482 Brassica carinata
BcaB02g10717 Brassica carinata
BcaB07g31685 Brassica carinata
BcaC04g22930 Brassica carinata
BcaNung00749 Brassica carinata
BolC1t00263H Brassica oleracea
BolC9t54266H Brassica oleracea
BraA01t00241Z Brassica rapa
BraA09t36816Z Brassica rapa
C01p02730 Brassica napus
C09p13780 Brassica napus
CAN.G358.4 Capsicum annuum
CAN.G785.9 Capsicum annuum
CANSAT01G2914 Cannabis sativa
CARHR108580 Cardamine hirsuta
CARHR244610 Cardamine hirsuta
CARHR292030 Cardamine hirsuta
CARHR292040 Cardamine hirsuta
Carub.0003s3223 Capsella rubella
Carub.0007s0403 Capsella rubella
Ca_02061_v3 Cicer arietinum L.
Ca_22361_v3 Cicer arietinum L.
Ca_24895_v3 Cicer arietinum L.
CBR_g46645 Chara braunii
CBR_g47160 Chara braunii
Cc07_g10390 Coffea canephora
CDE02G2873 Ceratophyllum demersum
CDE05G1932 Ceratophyllum demersum
Cfa006939 Carpinus fangiana
Cfa013902 Carpinus fangiana
Cfa022754 Carpinus fangiana
Cfa025317 Carpinus fangiana
Ciclev10003998m.g Citrus clementina
Ciclev10025097m.g Citrus clementina
CiPaw.07G055900 Carya illinoinensis
CiPaw.07G154300 Carya illinoinensis
ClCG07G008870 Citrullus lanatus
COL.COLO4_21964 Corchorus olitorius
COL.COLO4_21965 Corchorus olitorius
COL.COLO4_26200 Corchorus olitorius
Cpa.g.sc6.212 Carica papaya
Cre16.g686050 Chlamydomonas reinhardtii
CsaV3_4G005320 Cucumis sativus L.
CSS0026539 Camellia sinensis var. sinensis
CSS0040286 Camellia sinensis var. sinensis
CSS0044957 Camellia sinensis var. sinensis
DCAR_017340 Daucus carota
DCAR_025989 Daucus carota
DCAR_032028 Daucus carota
Dinv39484 Davidia involucrata
Dinv40056 Davidia involucrata
Duzib116G0247 Durio zibethinus
Duzib187G0760 Durio zibethinus
ECA238G2610 Erigeron canadensis
ECA246G3409 Erigeron canadensis
EL10As8g23854 Beta vulgaris
Eucgr.F01619 Eucalyptus grandis
Eucgr.J02394 Eucalyptus grandis
FAN04G2271 Fragaria x ananassa
FAN15G0533 Fragaria x ananassa
FAN18G0062 Fragaria x ananassa
FAN19G1383 Fragaria x ananassa
FAN23G1654 Fragaria x ananassa
FAN26G0004 Fragaria x ananassa
FAN27G0160 Fragaria x ananassa
FAN28G1899 Fragaria x ananassa
FvH4_1g12180 Fragaria vesca
FvH4_2g39020 Fragaria vesca
Glyma.01G169100 Glycine max
Glyma.02G050700 Glycine max
Glyma.02G050900 Glycine max
Glyma.06G026800 Glycine max
Glyma.11G074300 Glycine max
Glyma.14G215000 Glycine max
Glyma.16G131000 Glycine max
Glyma.17G159200 Glycine max
Gohir.A03G080600 Gossypium hirsutum
Gohir.A11G178000 Gossypium hirsutum
Gohir.D02G097200 Gossypium hirsutum
Gohir.D11G185800 Gossypium hirsutum
Gorai.005G110800 Gossypium raimondii
Gorai.007G197400 Gossypium raimondii
GSVIVG01018828001 Vitis vinifera
HanXRQChr14g0441611 Helianthus annuus
HanXRQChr14g0462231 Helianthus annuus
HanXRQChr15g0483831 Helianthus annuus
Haze_03810 Corylus avellana
Haze_22583 Corylus avellana
Hma1.2p1_0743F.1_g211410 Hydrangea macrophylla
HPP92_007406 Vanilla planifolia
HPP92_022296 Vanilla planifolia
Hund14028 Selenicereus undatus
Hund16474 Selenicereus undatus
Hund26869 Selenicereus undatus
Lalb_Chr05g0212481 Lupinus albus
Lalb_Chr08g0246021 Lupinus albus
Lalb_Chr08g0246031 Lupinus albus
Lalb_Chr08g0246041 Lupinus albus
Lalb_Chr09g0333081 Lupinus albus
Lj1g0001600 Lotus japonicus
Lj2C419G3 Lonicera japonica
Lj2g0011585 Lotus japonicus
Lj3C996G4 Lonicera japonica
Lj4g0005742 Lotus japonicus
Lsat_1_v5_gn_2_78381 Lactuca sativa
Lsat_1_v5_gn_3_73601 Lactuca sativa
Manes.01G142700 Manihot esculenta
Manes.02G101100 Manihot esculenta
Mapoly0092s0008 Marchantia polymorpha
MCO08G353 Micromonas commoda
MD15G1017500 Malus domestica
MD15G1249300 Malus domestica
Medtr3g113090 Medicago truncatula
Medtr5g021430 Medicago truncatula
Medtr8g076240 Medicago truncatula
Medtr8g076250 Medicago truncatula
MELO3C017538.2 Cucumis melo
Migut.H02482 Erythranthe guttata
Migut.L00037 Erythranthe guttata
MSTRG.23283 Avicennia marina
Nitab4.5_0000753g0070 Nicotiana tabacum
Nitab4.5_0002221g0070 Nicotiana tabacum
Nitab4.5_0010830g0040 Nicotiana tabacum
Nitab4.5_0010854g0010 Nicotiana tabacum
Nn5g29210 Nelumbo nucifera
Nn6g32236 Nelumbo nucifera
Oeu021940.2 Olea europaea
Oeu037736.3 Olea europaea
Os03g0112800 Oryza sativa ssp. japonica
Os10g0512100 Oryza sativa ssp. japonica
Peaxi162Scf00010g00062 Petunia axillaris
Peaxi162Scf00083g01312 Petunia axillaris
PGR083G2528 Punica granatum
PGR102G3213 Punica granatum
PGSC0003DMG400003621 Solanum tuberosum
PGSC0003DMG400022538 Solanum tuberosum
Phvul.002G111800 Phaseolus vulgaris
Phvul.003G259400 Phaseolus vulgaris
Phvul.009G014300 Phaseolus vulgaris
Potri.007G016100 Populus trichocarpa
Pp3c25_60 Physcomitrium patens
Pp3c2_23890 Physcomitrium patens
Pp3c6_13460 Physcomitrium patens
PRCOL_00004572 Prasinoderma coloniale
PRCOL_00006861 Prasinoderma coloniale
Prupe.1G370800 Prunus persica
Prupe.7G164900 Prunus persica
Psat0s765g0200 Pisum sativum
Psat1g194120 Pisum sativum
Psat4g098240 Pisum sativum
Psat5g013800 Pisum sativum
Psat5g179120 Pisum sativum
Psat5g179160 Pisum sativum
Psat5g179200 Pisum sativum
Psat5g179240 Pisum sativum
PSO386G0172 Papaver somniferum
PSO541G4582 Papaver somniferum
PSO675G6928 Papaver somniferum
QL02p010699 Quercus lobata
QL02p010714 Quercus lobata
QL02p010719 Quercus lobata
QL06p034000 Quercus lobata
RcHm_v2.0_Chr2g0099941 Rosa chinensis
RcHm_v2.0_Chr6g0302121 Rosa chinensis
Rhsim08G0035400 Rhododendron simsii
Sabra07G0013300 Salix brachista
SalBow5G2983 Salvia bowleyana
SalBow5G4461 Salvia bowleyana
SalBow6G2156 Salvia bowleyana
SalBow8G0898 Salvia bowleyana
Sc03g0003420 Simmondsia chinensis
Sed0016439 Sechium edule
Sed0023539 Sechium edule
SEGI_05939 Sequoiadendron giganteum
SEGI_22874 Sequoiadendron giganteum
SEGI_33982 Sequoiadendron giganteum
SGA_v2.0_scaffold51G18781 Striga asiatica
SHI08582 Sapria himalayana
SMO119G0014 Selaginella moellendorffii
Solyc02g084530.2 Solanum lycopersicum
Solyc02g084540.3 Solanum lycopersicum
Solyc03g033640.3 Solanum lycopersicum
Sopen02g029210 Solanum pennellii
Sopen03g006430 Solanum pennellii
Sp3g31530 Schrenkiella parvula
Sp7g33950 Schrenkiella parvula
TAR376G0802 Trochodendron aralioides
THA.LOC104804256 Tarenaya hassleriana
Thecc.01G023300 Theobroma cacao
Thecc.08G037500 Theobroma cacao
Thhalv10022586m.g Eutrema salsugineum
Thhalv10024597m.g Eutrema salsugineum
TPR.G2335 Trifolium pratense
TPR.G31196 Trifolium pratense
TPR.G33359 Trifolium pratense
TWI09G0057 Tripterygium wilfordii
TWI56G1491 Tripterygium wilfordii
unitig_736.g22362 Utricularia gibba
vmacro22094 Vaccinium macrocarpon
VMungo0251G0953 Vigna mungo
VMungo1215G1146 Vigna mungo
VMungo1309G0619 Vigna mungo
Zm00001eb043710 Zea mays
Zm00001eb404060 Zea mays

User provided reference genes

Program Settings