Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p08190 Brassica napus
A03p12550 Brassica napus
A03p12570 Brassica napus
A03p12580 Brassica napus
A10p15180 Brassica napus
Aa31LG3G13630 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1410 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2899 Anthoceros agrestis
Actinidia20952 Actinidia chinensis
Actinidia33312 Actinidia chinensis
Ah.09g229500 Amaranthus hybridus
Ah.14g084120 Amaranthus hybridus
AL8G33840 Arabidopsis lyrata
Aqoxy7G02489 Aquilegia oxysepala
Aqoxy7G03248 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.13YW1E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.34AD6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H1181I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N8MRLM Arachis hypogaea
AT5G57800 Arabidopsis thaliana
ATR0580G185 Amborella trichopoda
ATR1149G009 Amborella trichopoda
Atru.chr7.476 Acer truncatum
AUR62028407 Chenopodium quinoa
AUR62039755 Chenopodium quinoa
BcaB01g04490 Brassica carinata
BcaB05g22375 Brassica carinata
BcaB08g36147 Brassica carinata
BcaC04g19926 Brassica carinata
BolC2t07503H Brassica oleracea
BolC3t13917H Brassica oleracea
BolC3t13918H Brassica oleracea
BolC9t57821H Brassica oleracea
BraA02t05893Z Brassica rapa
BraA03t10572Z Brassica rapa
BraA03t10573Z Brassica rapa
BraA10t43601Z Brassica rapa
C02p13840 Brassica napus
C03p14750 Brassica napus
C09p49700 Brassica napus
CAN.G1008.19 Capsicum annuum
CAN.G1008.20 Capsicum annuum
CAN.G505.1 Capsicum annuum
CAN.G551.5 Capsicum annuum
CANSAT11G2644 Cannabis sativa
CARHR271540 Cardamine hirsuta
Carub.0008s1832 Capsella rubella
Ca_21170_v3 Cicer arietinum L.
CBR_g45703 Chara braunii
Cc04_g05440 Coffea canephora
Cc06_g14080 Coffea canephora
CDE02G0454 Ceratophyllum demersum
CDE04G2302 Ceratophyllum demersum
CDE07G0880 Ceratophyllum demersum
Cfa013553 Carpinus fangiana
Ciclev10007738m.g Citrus clementina
CiPaw.07G186200 Carya illinoinensis
CiPaw.08G040700 Carya illinoinensis
ClCG06G012860 Citrullus lanatus
COL.COLO4_10177 Corchorus olitorius
Cpa.g.sc75.22 Carica papaya
CsaV3_1G029420 Cucumis sativus L.
CSS0002668 Camellia sinensis var. sinensis
CSS0008873 Camellia sinensis var. sinensis
CSS0010838 Camellia sinensis var. sinensis
CSS0015096 Camellia sinensis var. sinensis
CSS0027546 Camellia sinensis var. sinensis
DCAR_009898 Daucus carota
DCAR_014721 Daucus carota
DCAR_016321 Daucus carota
DCAR_017940 Daucus carota
DCAR_021379 Daucus carota
DCAR_021381 Daucus carota
Dinv21441 Davidia involucrata
Dinv41309 Davidia involucrata
Dinv42789 Davidia involucrata
Dinv43312 Davidia involucrata
Duzib150G0737 Durio zibethinus
Duzib168G1638 Durio zibethinus
ECA236G4846 Erigeron canadensis
ECA247G2574 Erigeron canadensis
EL10Ac8g18872 Beta vulgaris
Eucgr.C00214 Eucalyptus grandis
FAN07G1662 Fragaria x ananassa
FAN12G3957 Fragaria x ananassa
FAN12G3974 Fragaria x ananassa
FAN17G1920 Fragaria x ananassa
FAN22G0155 Fragaria x ananassa
FvH4_4g10190 Fragaria vesca
Glyma.13G091200 Glycine max
Glyma.17G069100 Glycine max
Gohir.A08G093500 Gossypium hirsutum
Gohir.A08G235600 Gossypium hirsutum
Gohir.A13G207500 Gossypium hirsutum
Gohir.D08G097300 Gossypium hirsutum
Gohir.D08G256000 Gossypium hirsutum
Gohir.D13G211952 Gossypium hirsutum
Gorai.004G104100 Gossypium raimondii
Gorai.004G273200 Gossypium raimondii
Gorai.013G242200 Gossypium raimondii
GSVIVG01016069001 Vitis vinifera
GSVIVG01016071001 Vitis vinifera
GSVIVG01023740001 Vitis vinifera
HanXRQChr02g0033751 Helianthus annuus
HanXRQChr02g0033761 Helianthus annuus
HanXRQChr05g0142751 Helianthus annuus
HanXRQChr10g0284111 Helianthus annuus
Haze_22174 Corylus avellana
Hma1.2p1_0156F.1_g068700 Hydrangea macrophylla
Hma1.2p1_0338F.1_g129650 Hydrangea macrophylla
Hma1.2p1_1495F.1_g287000 Hydrangea macrophylla
Hma1.2p1_1495F.1_g287010 Hydrangea macrophylla
Hma1.2p1_1531F.1_g289260 Hydrangea macrophylla
Hma1.2p1_1561F.1_g290700 Hydrangea macrophylla
HPP92_017446 Vanilla planifolia
HPP92_017453 Vanilla planifolia
HPP92_017454 Vanilla planifolia
Hund08979 Selenicereus undatus
Hund08980 Selenicereus undatus
Hund26408 Selenicereus undatus
Lalb_Chr07g0180051 Lupinus albus
Lalb_Chr11g0072431 Lupinus albus
Lalb_Chr12g0198931 Lupinus albus
Lalb_Chr12g0198941 Lupinus albus
Lj4g0028054 Lotus japonicus
Lj6g0016166 Lotus japonicus
Lj9A490T25 Lonicera japonica
Lj9A490T26 Lonicera japonica
Lj9C727G2 Lonicera japonica
Lsat_1_v5_gn_1_30681 Lactuca sativa
Lsat_1_v5_gn_5_39160 Lactuca sativa
Lsat_1_v5_gn_5_39180 Lactuca sativa
Lsat_1_v5_gn_8_64421 Lactuca sativa
Manes.06G024400 Manihot esculenta
Mapoly0019s0170 Marchantia polymorpha
Mapoly0019s0173 Marchantia polymorpha
Mapoly0039s0086 Marchantia polymorpha
MBI14_g08085_MAGBIO Magnolia biondii
MBI15_g25683_MAGBIO Magnolia biondii
MBI15_g34422_MAGBIO Magnolia biondii
MCO02G031 Micromonas commoda
MD13G1273200 Malus domestica
MD16G1262000 Malus domestica
Medtr4g129630 Medicago truncatula
MELO3C010174.2 Cucumis melo
Migut.D01152 Erythranthe guttata
Migut.I00638 Erythranthe guttata
Migut.J01414 Erythranthe guttata
Migut.K00277 Erythranthe guttata
MSTRG.11216 Avicennia marina
MSTRG.19673 Avicennia marina
Nitab4.5_0000375g0360 Nicotiana tabacum
Nitab4.5_0001427g0120 Nicotiana tabacum
Nitab4.5_0002587g0100 Nicotiana tabacum
Nitab4.5_0003289g0020 Nicotiana tabacum
Nitab4.5_0004194g0030 Nicotiana tabacum
Nitab4.5_0004553g0030 Nicotiana tabacum
Nitab4.5_0007380g0040 Nicotiana tabacum
Nn2g12552 Nelumbo nucifera
Oeu036438.1 Olea europaea
Oeu045658.1 Olea europaea
Oeu054252.1 Olea europaea
Os02g0178800 Oryza sativa ssp. japonica
Os06g0653000 Oryza sativa ssp. japonica
Os09g0426800 Oryza sativa ssp. japonica
Peaxi162Scf00049g01513 Petunia axillaris
Peaxi162Scf00297g00712 Petunia axillaris
Peaxi162Scf00314g00943 Petunia axillaris
PGR142G3535 Punica granatum
PGSC0003DMG400007879 Solanum tuberosum
PGSC0003DMG400011170 Solanum tuberosum
PGSC0003DMG401014160 Solanum tuberosum
Phvul.003G151600 Phaseolus vulgaris
Potri.006G177500 Populus trichocarpa
Potri.018G099400 Populus trichocarpa
Pp3c11_6250 Physcomitrium patens
Pp3c18_18020 Physcomitrium patens
Pp3c2_29100 Physcomitrium patens
Pp3c7_5340 Physcomitrium patens
PRCOL_00003215 Prasinoderma coloniale
Prupe.1G098000 Prunus persica
Psat1g023360 Pisum sativum
Psat4g010320 Pisum sativum
PSO017G4189 Papaver somniferum
PSO063G7274 Papaver somniferum
PSO170G3420 Papaver somniferum
PSO769G0001 Papaver somniferum
PSO782G4704 Papaver somniferum
QL02p095535 Quercus lobata
RcHm_v2.0_Chr4g0404991 Rosa chinensis
Rhsim08G0201300 Rhododendron simsii
Sabra06G0135300 Salix brachista
Sabra18G0085900 Salix brachista
SalBow1G2145 Salvia bowleyana
SalBow1G4207 Salvia bowleyana
SalBow6G3054 Salvia bowleyana
Sc14g0001070 Simmondsia chinensis
Sed0015360 Sechium edule
Sed0023370 Sechium edule
SEGI_21403 Sequoiadendron giganteum
SEGI_36949 Sequoiadendron giganteum
SEGI_40196 Sequoiadendron giganteum
SGA_v2.0_scaffold5G02830 Striga asiatica
SGA_v2.0_scaffold66G22519 Striga asiatica
SGA_v2.0_scaffold74G24620 Striga asiatica
SHI02975 Sapria himalayana
SHI02976 Sapria himalayana
SMO145G0188 Selaginella moellendorffii
SMO157G0005 Selaginella moellendorffii
SMO364G0088 Selaginella moellendorffii
SMO367G0830 Selaginella moellendorffii
Solyc03g117800.4 Solanum lycopersicum
Sopen03g036710 Solanum pennellii
Sopen07g002390 Solanum pennellii
Sopen12g005580 Solanum pennellii
Sp6g19480 Schrenkiella parvula
TAR383G0260 Trochodendron aralioides
TAR458G0001 Trochodendron aralioides
TAR636G2027 Trochodendron aralioides
THA.LOC104817815 Tarenaya hassleriana
Thecc.09G159700 Theobroma cacao
Thhalv10012960m.g Eutrema salsugineum
TPR.G14493 Trifolium pratense
TPR.G5352 Trifolium pratense
TWI34G1916 Tripterygium wilfordii
TWI63G0286 Tripterygium wilfordii
unitig_0.g352 Utricularia gibba
unitig_52.g17033 Utricularia gibba
unitig_60.g25503 Utricularia gibba
unitig_60.g25504 Utricularia gibba
unitig_60.g25618 Utricularia gibba
unitig_699.g19816 Utricularia gibba
vmacro13059 Vaccinium macrocarpon
vmacro19084 Vaccinium macrocarpon
VMungo1215G0196 Vigna mungo
Zm00001eb233880 Zea mays
Zm00001eb313510 Zea mays
Zm00001eb389050 Zea mays

User provided reference genes

Program Settings