Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p18790 Brassica napus
A02p10570 Brassica napus
A03p14800 Brassica napus
A10p11390 Brassica napus
Aa31LG3G9930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3847 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.339 Anthoceros agrestis
Ah.13g070950 Amaranthus hybridus
AL7G25170 Arabidopsis lyrata
AL8G29230 Arabidopsis lyrata
AL8G30010 Arabidopsis lyrata
Aqoxy5G04376 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.989YCX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9VIW60 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F37GPL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VNL2K0 Arachis hypogaea
AT4G27585 Arabidopsis thaliana
AT5G54100 Arabidopsis thaliana
ATR0579G011 Amborella trichopoda
Atru.chr12.2511 Acer truncatum
Atru.chr12.2533 Acer truncatum
AUR62005955 Chenopodium quinoa
AUR62028109 Chenopodium quinoa
BcaB01g04272 Brassica carinata
BcaB01g04275 Brassica carinata
BcaB05g22110 Brassica carinata
BcaB08g35760 Brassica carinata
BcaC01g06285 Brassica carinata
BcaC03g14323 Brassica carinata
BcaC03g14351 Brassica carinata
BcaC04g20392 Brassica carinata
BcaNung01658 Brassica carinata
BcaNung07039 Brassica carinata
BolC1t02325H Brassica oleracea
BolC2t07894H Brassica oleracea
BolC2t07895H Brassica oleracea
BolC3t14143H Brassica oleracea
BolC9t57291H Brassica oleracea
BraA01t01823Z Brassica rapa
BraA02t06121Z Brassica rapa
BraA02t06122Z Brassica rapa
BraA03t10773Z Brassica rapa
BraA10t43233Z Brassica rapa
C01p23730 Brassica napus
C02p17630 Brassica napus
C02p17640 Brassica napus
C03p17290 Brassica napus
C09p44190 Brassica napus
CAN.G206.185 Capsicum annuum
CAN.G303.47 Capsicum annuum
CAN.G65.146 Capsicum annuum
CANSAT21G0360 Cannabis sativa
CARHR235280 Cardamine hirsuta
CARHR267300 Cardamine hirsuta
Carub.0002s0351 Capsella rubella
Carub.0004s0063 Capsella rubella
Carub.0007s1328 Capsella rubella
Carub.0008s1439 Capsella rubella
Ca_16795_v3 Cicer arietinum L.
CBR_g19537 Chara braunii
Cc02_g00670 Coffea canephora
CDE09G0132 Ceratophyllum demersum
CDE11G0690 Ceratophyllum demersum
Cfa016139 Carpinus fangiana
Cfa026480 Carpinus fangiana
Ciclev10020366m.g Citrus clementina
CiPaw.05G208000 Carya illinoinensis
CiPaw.06G039000 Carya illinoinensis
ClCG07G009690 Citrullus lanatus
COL.COLO4_12243 Corchorus olitorius
COL.COLO4_14391 Corchorus olitorius
COL.COLO4_23139 Corchorus olitorius
Cpa.g.sc3.176 Carica papaya
Cre19.g750847 Chlamydomonas reinhardtii
CsaV3_4G009820 Cucumis sativus L.
CSS0012401 Camellia sinensis var. sinensis
CSS0014747 Camellia sinensis var. sinensis
CSS0027442 Camellia sinensis var. sinensis
CSS0031237 Camellia sinensis var. sinensis
CSS0034101 Camellia sinensis var. sinensis
CSS0047140 Camellia sinensis var. sinensis
DCAR_008993 Daucus carota
DCAR_010415 Daucus carota
DCAR_011119 Daucus carota
DCAR_020386 Daucus carota
Dinv29198 Davidia involucrata
Duzib068G1387 Durio zibethinus
Duzib205G1101 Durio zibethinus
EL10Ac3g05141 Beta vulgaris
EL10Ac3g05142 Beta vulgaris
Eucgr.K00456 Eucalyptus grandis
FAN01G2562 Fragaria x ananassa
FAN03G3217 Fragaria x ananassa
FAN10G2430 Fragaria x ananassa
FAN10G2824 Fragaria x ananassa
FAN11G1140 Fragaria x ananassa
FAN20G2822 Fragaria x ananassa
FAN22G0360 Fragaria x ananassa
FAN22G2156 Fragaria x ananassa
FAN24G3241 Fragaria x ananassa
FvH4_2g05760 Fragaria vesca
FvH4_2g05761 Fragaria vesca
FvH4_7g33130 Fragaria vesca
Glyma.04G226400 Glycine max
Glyma.06G138500 Glycine max
Gohir.A08G106100 Gossypium hirsutum
Gohir.A12G245300 Gossypium hirsutum
Gohir.D08G117500 Gossypium hirsutum
Gohir.D12G246000 Gossypium hirsutum
Gorai.004G126000 Gossypium raimondii
Gorai.008G263700 Gossypium raimondii
GSVIVG01016796001 Vitis vinifera
GSVIVG01019003001 Vitis vinifera
HanXRQChr04g0117931 Helianthus annuus
Haze_00322 Corylus avellana
Haze_05136 Corylus avellana
Haze_05137 Corylus avellana
Haze_26799 Corylus avellana
Hma1.2p1_0115F.1_g055650 Hydrangea macrophylla
Hma1.2p1_0415F.1_g148330 Hydrangea macrophylla
Hma1.2p1_0667F.1_g199640 Hydrangea macrophylla
HPP92_020109 Vanilla planifolia
Hund09742 Selenicereus undatus
Lalb_Chr08g0239461 Lupinus albus
Lalb_Chr11g0067521 Lupinus albus
Lj1g0014590 Lotus japonicus
Lsat_1_v5_gn_2_135521 Lactuca sativa
Manes.05G196100 Manihot esculenta
Mapoly0011s0012 Marchantia polymorpha
MBI11_g23188_MAGBIO Magnolia biondii
MBI11_g23191_MAGBIO Magnolia biondii
MBI11_g27751_MAGBIO Magnolia biondii
MBI12_g30149_MAGBIO Magnolia biondii
MBI16_g35702_MAGBIO Magnolia biondii
MBI16_g46921_MAGBIO Magnolia biondii
MBI19_g07192_MAGBIO Magnolia biondii
MCO05G415 Micromonas commoda
MD01G1230500 Malus domestica
MD07G1302100 Malus domestica
Medtr1g008640 Medicago truncatula
Medtr2g064800 Medicago truncatula
Medtr3g093140 Medicago truncatula
Medtr3g093180 Medicago truncatula
Medtr3g093220 Medicago truncatula
MELO3C024849.2 Cucumis melo
Migut.F00945 Erythranthe guttata
Migut.F00973 Erythranthe guttata
Migut.F00974 Erythranthe guttata
Migut.F00992 Erythranthe guttata
Migut.I00853 Erythranthe guttata
Migut.L00800 Erythranthe guttata
MSTRG.26962 Avicennia marina
MSTRG.8589 Avicennia marina
Nitab4.5_0000021g0130 Nicotiana tabacum
Nitab4.5_0000115g0130 Nicotiana tabacum
Nitab4.5_0000568g0210 Nicotiana tabacum
Nitab4.5_0001591g0070 Nicotiana tabacum
Nitab4.5_0003561g0010 Nicotiana tabacum
Nitab4.5_0004582g0060 Nicotiana tabacum
Nn1g00477 Nelumbo nucifera
Oeu029328.1 Olea europaea
Oeu055417.1 Olea europaea
Oeu061042.4 Olea europaea
Os08g0158500 Oryza sativa ssp. japonica
Os08g0161100 Oryza sativa ssp. japonica
Peaxi162Scf00166g00910 Petunia axillaris
Peaxi162Scf00815g00117 Petunia axillaris
Peaxi162Scf01026g00243 Petunia axillaris
PGR142G3496 Punica granatum
PGSC0003DMG400000577 Solanum tuberosum
PGSC0003DMG400026924 Solanum tuberosum
Phvul.007G076100 Phaseolus vulgaris
Phvul.009G039300 Phaseolus vulgaris
Potri.012G005500 Populus trichocarpa
Potri.012G009800 Populus trichocarpa
Potri.012G010001 Populus trichocarpa
Potri.012G011345 Populus trichocarpa
Potri.015G001900 Populus trichocarpa
Pp3c14_5440 Physcomitrium patens
PRCOL_00004513 Prasinoderma coloniale
PRCOL_00005892 Prasinoderma coloniale
Prupe.2G321200 Prunus persica
Psat5g070720 Pisum sativum
PSO063G5217 Papaver somniferum
PSO782G3149 Papaver somniferum
QL02p039237 Quercus lobata
QL09p006151 Quercus lobata
QL12p034564 Quercus lobata
RcHm_v2.0_Chr1g0323811 Rosa chinensis
RcHm_v2.0_Chr1g0330661 Rosa chinensis
RcHm_v2.0_Chr1g0330671 Rosa chinensis
RcHm_v2.0_Chr1g0330681 Rosa chinensis
RcHm_v2.0_Chr1g0383201 Rosa chinensis
RcHm_v2.0_Chr6g0256651 Rosa chinensis
Rhsim03G0217600 Rhododendron simsii
Rhsim09G0210700 Rhododendron simsii
Rhsim10G0035100 Rhododendron simsii
Sabra12G0001200 Salix brachista
Sabra15G0001200 Salix brachista
SalBow4G0400 Salvia bowleyana
SalBow4G1608 Salvia bowleyana
Sc04g0006340 Simmondsia chinensis
Sc16g0003990 Simmondsia chinensis
Sc19g0000430 Simmondsia chinensis
Sed0003975 Sechium edule
SEGI_33944 Sequoiadendron giganteum
SGA_v2.0_scaffold141G35589 Striga asiatica
SGA_v2.0_scaffold18G08488 Striga asiatica
SGA_v2.0_scaffold44G16866 Striga asiatica
SMO367G0529 Selaginella moellendorffii
Solyc02g088360.1 Solanum lycopersicum
Solyc02g088370.1 Solanum lycopersicum
Solyc03g080050.3 Solanum lycopersicum
Solyc06g073030.3 Solanum lycopersicum
Sopen02g033050 Solanum pennellii
Sopen03g021770 Solanum pennellii
Sopen06g029380 Solanum pennellii
Sp6g16130 Schrenkiella parvula
Sp7g25510 Schrenkiella parvula
TAR375G0760 Trochodendron aralioides
TAR627G0627 Trochodendron aralioides
TAR629G0525 Trochodendron aralioides
THA.LOC104811884 Tarenaya hassleriana
Thecc.01G324200 Theobroma cacao
Thecc.03G211300 Theobroma cacao
Thecc.04G088700 Theobroma cacao
Thhalv10015378m.g Eutrema salsugineum
Thhalv10015444m.g Eutrema salsugineum
Thhalv10025217m.g Eutrema salsugineum
TPR.G35914 Trifolium pratense
TWI14G1344 Tripterygium wilfordii
TWI23G0751 Tripterygium wilfordii
vmacro05677 Vaccinium macrocarpon
vmacro06467 Vaccinium macrocarpon
vmacro10169 Vaccinium macrocarpon
VMungo1309G0526 Vigna mungo
Zm00001eb172350 Zea mays
Zm00001eb415710 Zea mays

User provided reference genes

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