Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p06370 Brassica napus
A04p13710 Brassica napus
A04p15790 Brassica napus
A07p06810 Brassica napus
Aa31LG2G5410 Aethionema arabicum
Aa31LG9G950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2235 Anthoceros agrestis
Actinidia36153 Actinidia chinensis
Ah.10g032680 Amaranthus hybridus
AL7G49070 Arabidopsis lyrata
Aqoxy112s001 Aquilegia oxysepala
Aqoxy3G01302 Aquilegia oxysepala
Aqoxy3G01592 Aquilegia oxysepala
Aqoxy5G03606 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1MH00H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.39Y8M7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3RFD6Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.96G9DX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ATC700 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CBX4E5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DE5473 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KEE7NS Arachis hypogaea
AT5G40670 Arabidopsis thaliana
ATR0824G154 Amborella trichopoda
ATR0824G254 Amborella trichopoda
AUR62008823 Chenopodium quinoa
AUR62018245 Chenopodium quinoa
AUR62025418 Chenopodium quinoa
AUR62037758 Chenopodium quinoa
BcaB06g27544 Brassica carinata
BcaB06g27545 Brassica carinata
BcaB06g27546 Brassica carinata
BcaB06g27758 Brassica carinata
BcaC02g08817 Brassica carinata
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus
BolC4t26351H Brassica oleracea
BolC4t26610H Brassica oleracea
BolC5t33449H Brassica oleracea
BraA03t12607Z Brassica rapa
BraA04t17031Z Brassica rapa
BraA04t17213Z Brassica rapa
C04p47500 Brassica napus
C04p50130 Brassica napus
C05p47240 Brassica napus
CAN.G1965.7 Capsicum annuum
CAN.G473.49 Capsicum annuum
CANSAT64G0819 Cannabis sativa
CANSAT64G2583 Cannabis sativa
CANSAT64G2669 Cannabis sativa
CARHR261270 Cardamine hirsuta
Carub.0007s3481 Capsella rubella
Ca_03870_v3 Cicer arietinum L.
Ca_26402_v3 Cicer arietinum L.
CBR_g618 Chara braunii
Cc06_g20990 Coffea canephora
Cc07_g00310 Coffea canephora
CDE02G3761 Ceratophyllum demersum
CDE09G1317 Ceratophyllum demersum
Cfa007296 Carpinus fangiana
Cfa007297 Carpinus fangiana
Cfa024842 Carpinus fangiana
Ciclev10016221m.g Citrus clementina
CiPaw.03G049100 Carya illinoinensis
CiPaw.03G049200 Carya illinoinensis
CiPaw.03G049300 Carya illinoinensis
ClCG05G012970 Citrullus lanatus
ClCG05G012980 Citrullus lanatus
ClCG09G019560 Citrullus lanatus
COL.COLO4_29243 Corchorus olitorius
Cpa.g.sc130.52 Carica papaya
Cpa.g.sc130.53 Carica papaya
CsaV3_3G027550 Cucumis sativus L.
CsaV3_5G026820 Cucumis sativus L.
CSS0033299 Camellia sinensis var. sinensis
CSS0039131 Camellia sinensis var. sinensis
DCAR_021753 Daucus carota
Dinv33393 Davidia involucrata
Duzib187G0143 Durio zibethinus
ECA232G2081 Erigeron canadensis
ECA246G1039 Erigeron canadensis
EL10Ac2g03300 Beta vulgaris
EL10Ac7g17718 Beta vulgaris
Eucgr.J02273 Eucalyptus grandis
FAN02G2148 Fragaria x ananassa
FAN02G4543 Fragaria x ananassa
FAN05G1947 Fragaria x ananassa
FAN05G3572 Fragaria x ananassa
FAN05G5553 Fragaria x ananassa
FAN14G1252 Fragaria x ananassa
FAN14G1315 Fragaria x ananassa
FAN14G1872 Fragaria x ananassa
FvH4_6g52300 Fragaria vesca
FvH4_6g52311 Fragaria vesca
FvH4_6g52320 Fragaria vesca
FvH4_6g52360 Fragaria vesca
Glyma.16G065900 Glycine max
Glyma.19G055100 Glycine max
Glyma.19G055200 Glycine max
Glyma.19G080800 Glycine max
Glyma.19G080900 Glycine max
Glyma.U031227 Glycine max
Gohir.A11G065700 Gossypium hirsutum
Gohir.D11G069900 Gossypium hirsutum
Gorai.007G075000 Gossypium raimondii
GSVIVG01003971001 Vitis vinifera
GSVIVG01003973001 Vitis vinifera
HanXRQChr09g0255751 Helianthus annuus
HanXRQChr17g0549461 Helianthus annuus
Haze_14797 Corylus avellana
Haze_14798 Corylus avellana
Haze_14799 Corylus avellana
Haze_26168 Corylus avellana
HPP92_024238 Vanilla planifolia
Hund05512 Selenicereus undatus
Hund13242 Selenicereus undatus
Lalb_Chr02g0158001 Lupinus albus
Lalb_Chr14g0363001 Lupinus albus
Lalb_Chr14g0363011 Lupinus albus
Lalb_Chr21g0317651 Lupinus albus
Lalb_Chr21g0317661 Lupinus albus
Lj1g0002135 Lotus japonicus
Lj1g0022362 Lotus japonicus
Lj1g0023684 Lotus japonicus
Lj1g0026747 Lotus japonicus
Lj2g0002410 Lotus japonicus
Lj2g0023788 Lotus japonicus
Lj2g0024843 Lotus japonicus
Lj2g0026423 Lotus japonicus
Lju41C45T9 Lonicera japonica
Lsat_1_v5_gn_4_184761 Lactuca sativa
Manes.15G155200 Manihot esculenta
Manes.15G155300 Manihot esculenta
Manes.17G108300 Manihot esculenta
Manes.17G108400 Manihot esculenta
Mapoly0022s0056 Marchantia polymorpha
MBI06_g21299_MAGBIO Magnolia biondii
MBI08_g42059_MAGBIO Magnolia biondii
MD09G1018800 Malus domestica
MD09G1018900 Malus domestica
MD17G1019200 Malus domestica
MD17G1019400 Malus domestica
Medtr0018s0310 Medicago truncatula
Medtr0018s0320 Medicago truncatula
Medtr6g022180 Medicago truncatula
Medtr6g022190 Medicago truncatula
Medtr6g022210 Medicago truncatula
MELO3C014818.2 Cucumis melo
MELO3C014821.2 Cucumis melo
MELO3C021612.2 Cucumis melo
Migut.H00047 Erythranthe guttata
Migut.K01431 Erythranthe guttata
Nitab4.5_0000559g0090 Nicotiana tabacum
Nitab4.5_0000935g0020 Nicotiana tabacum
Nitab4.5_0001031g0230 Nicotiana tabacum
Nitab4.5_0002158g0170 Nicotiana tabacum
Nitab4.5_0002158g0180 Nicotiana tabacum
Nitab4.5_0002158g0270 Nicotiana tabacum
Nitab4.5_0008949g0030 Nicotiana tabacum
Nn3g16601 Nelumbo nucifera
Nn4g22477 Nelumbo nucifera
Oeu054660.1 Olea europaea
Os12g0278700 Oryza sativa ssp. japonica
Peaxi162Scf00420g00248 Petunia axillaris
Peaxi162Scf00700g00235 Petunia axillaris
PGR083G1311 Punica granatum
PGR083G2510 Punica granatum
PGSC0003DMG400012625 Solanum tuberosum
PGSC0003DMG400013431 Solanum tuberosum
Phvul.004G058300 Phaseolus vulgaris
Phvul.004G058400 Phaseolus vulgaris
Phvul.004G058600 Phaseolus vulgaris
Phvul.008G145800 Phaseolus vulgaris
Phvul.008G145900 Phaseolus vulgaris
Potri.017G070300 Populus trichocarpa
Potri.017G070401 Populus trichocarpa
Pp3c5_9870 Physcomitrium patens
PRCOL_00006143 Prasinoderma coloniale
Prupe.3G298300 Prunus persica
Prupe.3G298400 Prunus persica
Psat1g083240 Pisum sativum
Psat1g083560 Pisum sativum
Psat1g083600 Pisum sativum
Psat1g083640 Pisum sativum
Psat3g168320 Pisum sativum
Psat3g168440 Pisum sativum
PSO161G0012 Papaver somniferum
PSO170G1758 Papaver somniferum
PSO478G1025 Papaver somniferum
PSO509G0008 Papaver somniferum
QL02p073320 Quercus lobata
QL12p031384 Quercus lobata
QL12p031398 Quercus lobata
RcHm_v2.0_Chr2g0092771 Rosa chinensis
RcHm_v2.0_Chr2g0092841 Rosa chinensis
RcHm_v2.0_Chr2g0173831 Rosa chinensis
RcHm_v2.0_Chr2g0173881 Rosa chinensis
RcHm_v2.0_Chr2g0173901 Rosa chinensis
RcHm_v2.0_Chr2g0174021 Rosa chinensis
RcHm_v2.0_Chr2g0174261 Rosa chinensis
RcHm_v2.0_Chr2g0174271 Rosa chinensis
RcHm_v2.0_Chr2g0174301 Rosa chinensis
Rhsim10G0012500 Rhododendron simsii
Sabra17G0062200 Salix brachista
SalBow7G3951 Salvia bowleyana
Sc03g0007090 Simmondsia chinensis
Sc03g0007110 Simmondsia chinensis
Sc03g0007120 Simmondsia chinensis
Sc16g0003730 Simmondsia chinensis
Sed0009814 Sechium edule
Sed0025227 Sechium edule
SEGI_32415 Sequoiadendron giganteum
SGA_v2.0_scaffold154G37145 Striga asiatica
SGA_v2.0_scaffold18G08246 Striga asiatica
SMO356G0154 Selaginella moellendorffii
SMO356G0687 Selaginella moellendorffii
Solyc02g093700.3 Solanum lycopersicum
Solyc03g005120.3 Solanum lycopersicum
Sopen02g038340 Solanum pennellii
Sopen03g001130 Solanum pennellii
Sp7g01190 Schrenkiella parvula
TAR622G0923 Trochodendron aralioides
THA.LOC104805353 Tarenaya hassleriana
Thecc.04G026500 Theobroma cacao
Thhalv10027843m.g Eutrema salsugineum
TPR.G1092 Trifolium pratense
TPR.G1124 Trifolium pratense
TPR.G25389 Trifolium pratense
TPR.G7508 Trifolium pratense
TPR.G7856 Trifolium pratense
TPR.G7874 Trifolium pratense
TWI36G1396 Tripterygium wilfordii
unitig_0.g1592 Utricularia gibba
unitig_1.g29343 Utricularia gibba
unitig_37.g12421 Utricularia gibba
unitig_748.g6970 Utricularia gibba
vmacro05909 Vaccinium macrocarpon
VMungo0464G1875 Vigna mungo
VMungo1383G0408 Vigna mungo
VMungo1383G3383 Vigna mungo
Zm00001eb408630 Zea mays

User provided reference genes

Program Settings