Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p46440 Brassica napus
A07p10230 Brassica napus
A07p10240 Brassica napus
A08p24850 Brassica napus
A08p24860 Brassica napus
A09p36680 Brassica napus
Aa31LG6G5850 Aethionema arabicum
Aa31LG9G7360 Aethionema arabicum
Actinidia35610 Actinidia chinensis
Ah.14g084300 Amaranthus hybridus
AL1G43600 Arabidopsis lyrata
AL1G43610 Arabidopsis lyrata
AL8G12950 Arabidopsis lyrata
Aqoxy1G01935 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.37RBIB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C64WWP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D8KF1C Arachis hypogaea
AT1G29770 Arabidopsis thaliana
AT1G29780 Arabidopsis thaliana
AT5G45700 Arabidopsis thaliana
ATR0213G032 Amborella trichopoda
ATR0582G163 Amborella trichopoda
Atru.chr10.1524 Acer truncatum
AUR62039496 Chenopodium quinoa
AUR62041803 Chenopodium quinoa
BcaB03g12177 Brassica carinata
BcaB03g12178 Brassica carinata
BcaB03g13859 Brassica carinata
BcaB07g32564 Brassica carinata
BcaC01g00136 Brassica carinata
BcaC01g00137 Brassica carinata
BcaC05g26992 Brassica carinata
BcaC06g31526 Brassica carinata
BcaC06g34410 Brassica carinata
BcaC06g35463 Brassica carinata
BcaC06g35464 Brassica carinata
BolC3t19873H Brassica oleracea
BolC3t19874H Brassica oleracea
BolC5t31576H Brassica oleracea
BolC7t42068H Brassica oleracea
BolC7t43417H Brassica oleracea
BraA06t27517Z Brassica rapa
BraA07t28819Z Brassica rapa
BraA07t28820Z Brassica rapa
BraA08t34440Z Brassica rapa
BraA08t34441Z Brassica rapa
BraA09t39187Z Brassica rapa
C03p76170 Brassica napus
C03p76180 Brassica napus
C05p28520 Brassica napus
C07p15750 Brassica napus
C07p15760 Brassica napus
C07p28810 Brassica napus
CAN.G411.31 Capsicum annuum
CANSAT35G1123 Cannabis sativa
CARHR029140 Cardamine hirsuta
CARHR029150 Cardamine hirsuta
CARHR176270 Cardamine hirsuta
Carub.0001s2801 Capsella rubella
Carub.0001s2802 Capsella rubella
Carub.0008s0231 Capsella rubella
Ca_00481_v3 Cicer arietinum L.
CBR_g46276 Chara braunii
Cc02_g15810 Coffea canephora
CDE03G0090 Ceratophyllum demersum
CDE03G0385 Ceratophyllum demersum
CDE04G2396 Ceratophyllum demersum
Cfa021996 Carpinus fangiana
Ciclev10016126m.g Citrus clementina
CiPaw.09G136300 Carya illinoinensis
CiPaw.10G102800 Carya illinoinensis
ClCG01G023990 Citrullus lanatus
COL.COLO4_22853 Corchorus olitorius
COL.COLO4_31210 Corchorus olitorius
Cpa.g.sc124.11 Carica papaya
Cre06.g284450 Chlamydomonas reinhardtii
CsaV3_6G051130 Cucumis sativus L.
CSS0024826 Camellia sinensis var. sinensis
CSS0026166 Camellia sinensis var. sinensis
CSS0030919 Camellia sinensis var. sinensis
DCAR_027968 Daucus carota
Dinv12734 Davidia involucrata
Duzib160G0018 Durio zibethinus
Duzib160G0763 Durio zibethinus
Duzib192G0319 Durio zibethinus
Duzib235G0153 Durio zibethinus
Duzib235G0339 Durio zibethinus
Duzib235G1105 Durio zibethinus
ECA232G3386 Erigeron canadensis
ECA234G4105 Erigeron canadensis
ECA238G3282 Erigeron canadensis
EL10Ac8g19875 Beta vulgaris
Eucgr.D00426 Eucalyptus grandis
FAN11G1984 Fragaria x ananassa
FAN16G2409 Fragaria x ananassa
FAN21G3968 Fragaria x ananassa
FAN21G4032 Fragaria x ananassa
FAN25G2714 Fragaria x ananassa
FvH4_3g07100 Fragaria vesca
FvH4_3g07110 Fragaria vesca
FvH4_3g36710 Fragaria vesca
Glyma.13G225100 Glycine max
Glyma.15G087100 Glycine max
Gohir.A06G128002 Gossypium hirsutum
Gohir.A10G033500 Gossypium hirsutum
Gohir.A10G033550 Gossypium hirsutum
Gohir.A10G033600 Gossypium hirsutum
Gohir.D06G139100 Gossypium hirsutum
Gohir.D06G139150 Gossypium hirsutum
Gohir.D06G139200 Gossypium hirsutum
Gohir.D06G139250 Gossypium hirsutum
Gohir.D10G034200 Gossypium hirsutum
Gohir.D10G034250 Gossypium hirsutum
Gohir.D10G034300 Gossypium hirsutum
Gorai.010G161800 Gossypium raimondii
Gorai.010G161900 Gossypium raimondii
Gorai.010G162000 Gossypium raimondii
Gorai.010G162100 Gossypium raimondii
Gorai.010G162300 Gossypium raimondii
Gorai.011G035900 Gossypium raimondii
Gorai.011G036000 Gossypium raimondii
Gorai.011G036100 Gossypium raimondii
HanXRQChr16g0520581 Helianthus annuus
HanXRQChr16g0520591 Helianthus annuus
HanXRQChr16g0520601 Helianthus annuus
Haze_05365 Corylus avellana
HPP92_001996 Vanilla planifolia
HPP92_020062 Vanilla planifolia
Lalb_Chr18g0054911 Lupinus albus
Lj1P1177T78 Lonicera japonica
Lj2P316T22 Lonicera japonica
Lj6g0027192 Lotus japonicus
Lsat_1_v5_gn_8_135541 Lactuca sativa
Lsat_1_v5_gn_8_135561 Lactuca sativa
Manes.16G043800 Manihot esculenta
Manes.17G061000 Manihot esculenta
Mapoly0008s0118 Marchantia polymorpha
Mapoly0224s0008 Marchantia polymorpha
MBI06_g16568_MAGBIO Magnolia biondii
MCO11G874 Micromonas commoda
MD00G1007300 Malus domestica
MD00G1007500 Malus domestica
MD10G1273900 Malus domestica
MD10G1274000 Malus domestica
Medtr2g017810 Medicago truncatula
MELO3C007191.2 Cucumis melo
Migut.H01403 Erythranthe guttata
MSTRG.13238 Avicennia marina
Nitab4.5_0001778g0140 Nicotiana tabacum
Nitab4.5_0008572g0010 Nicotiana tabacum
Nn6g34452 Nelumbo nucifera
Oeu042432.1 Olea europaea
Os05g0205100 Oryza sativa ssp. japonica
Peaxi162Scf00112g00133 Petunia axillaris
PGR031G1412 Punica granatum
PGSC0003DMG400028411 Solanum tuberosum
Phvul.006G171200 Phaseolus vulgaris
Potri.004G062900 Populus trichocarpa
Potri.011G072000 Populus trichocarpa
Pp3c8_21120 Physcomitrium patens
PRCOL_00000302 Prasinoderma coloniale
Prupe.4G068500 Prunus persica
Prupe.4G068600 Prunus persica
Psat1g196760 Pisum sativum
PSO017G3080 Papaver somniferum
PSO478G4666 Papaver somniferum
QL05p050221 Quercus lobata
QL93p1081_0004 Quercus lobata
RcHm_v2.0_Chr5g0012001 Rosa chinensis
RcHm_v2.0_Chr5g0012011 Rosa chinensis
Rhsim13G0187000 Rhododendron simsii
Sabra04G0041700 Salix brachista
Sabra11G0056400 Salix brachista
Sabra11G0059700 Salix brachista
SalBow5G1191 Salvia bowleyana
SalBow5G4338 Salvia bowleyana
SalBow7G2368 Salvia bowleyana
SalBow7G3587 Salvia bowleyana
SalBow8G3036 Salvia bowleyana
Sc17g0005570 Simmondsia chinensis
Sed0015299 Sechium edule
Sed0019545 Sechium edule
SEGI_15066 Sequoiadendron giganteum
SEGI_26505 Sequoiadendron giganteum
SEGI_35065 Sequoiadendron giganteum
SEGI_37355 Sequoiadendron giganteum
SGA_v2.0_scaffold106G30608 Striga asiatica
SMO087G0001 Selaginella moellendorffii
SMO087G0002 Selaginella moellendorffii
SMO114G0044 Selaginella moellendorffii
SMO116G0187 Selaginella moellendorffii
SMO116G0424 Selaginella moellendorffii
SMO139G0107 Selaginella moellendorffii
SMO141G0041 Selaginella moellendorffii
SMO141G0226 Selaginella moellendorffii
SMO144G0022 Selaginella moellendorffii
SMO164G0081 Selaginella moellendorffii
SMO201G0017 Selaginella moellendorffii
SMO201G0182 Selaginella moellendorffii
SMO201G0197 Selaginella moellendorffii
SMO271G0009 Selaginella moellendorffii
SMO271G0032 Selaginella moellendorffii
SMO271G0034 Selaginella moellendorffii
SMO271G0081 Selaginella moellendorffii
SMO271G0083 Selaginella moellendorffii
SMO271G0087 Selaginella moellendorffii
SMO271G0110 Selaginella moellendorffii
SMO271G0122 Selaginella moellendorffii
SMO271G0156 Selaginella moellendorffii
SMO271G0161 Selaginella moellendorffii
SMO271G0188 Selaginella moellendorffii
SMO292G0004 Selaginella moellendorffii
SMO308G0032 Selaginella moellendorffii
SMO308G0060 Selaginella moellendorffii
SMO335G0002 Selaginella moellendorffii
SMO335G0018 Selaginella moellendorffii
SMO347G0101 Selaginella moellendorffii
SMO364G0774 Selaginella moellendorffii
SMO367G1061 Selaginella moellendorffii
Solyc02g071930.2 Solanum lycopersicum
Sopen02g020920 Solanum pennellii
Sp1g25660 Schrenkiella parvula
Sp1g25670 Schrenkiella parvula
Sp2g10590 Schrenkiella parvula
TAR627G0181 Trochodendron aralioides
THA.LOC104798443 Tarenaya hassleriana
THA.LOC104812659 Tarenaya hassleriana
THA.LOC104812883 Tarenaya hassleriana
THA.LOC104820702 Tarenaya hassleriana
THA.LOC104820703 Tarenaya hassleriana
Thecc.06G163400 Theobroma cacao
Thecc.06G163500 Theobroma cacao
Thecc.06G163600 Theobroma cacao
Thhalv10000984m.g Eutrema salsugineum
Thhalv10009586m.g Eutrema salsugineum
Thhalv10009741m.g Eutrema salsugineum
Thhalv10019804m.g Eutrema salsugineum
TPR.G4569 Trifolium pratense
TWI09G1552 Tripterygium wilfordii
TWI53G2106 Tripterygium wilfordii
unitig_749.g13670 Utricularia gibba
VMungo0540G2214 Vigna mungo
Zm00001eb347320 Zea mays

User provided reference genes

Program Settings