Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p16610 Brassica napus
A07p08620 Brassica napus
Aa31LG9G3280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.427 Anthoceros agrestis
Actinidia08914 Actinidia chinensis
Ah.03g135510 Amaranthus hybridus
Ah.03g135520 Amaranthus hybridus
AL3G38660 Arabidopsis lyrata
AL7G42330 Arabidopsis lyrata
Aqoxy3G01860 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1UR2FN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IWM9CF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T7Z28A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V1VZZ7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YUW7Y0 Arachis hypogaea
AT3G23760 Arabidopsis thaliana
AT4G14100 Arabidopsis thaliana
ATR0582G214 Amborella trichopoda
Atru.chr12.1439 Acer truncatum
Atru.chr7.746 Acer truncatum
AUR62005719 Chenopodium quinoa
AUR62005720 Chenopodium quinoa
AUR62028837 Chenopodium quinoa
BcaB06g26539 Brassica carinata
BcaB07g33056 Brassica carinata
BcaC06g35565 Brassica carinata
BcaC08g44295 Brassica carinata
BolC6t36911H Brassica oleracea
BolC7t41841H Brassica oleracea
BraA05t20567Z Brassica rapa
BraA07t28651Z Brassica rapa
C06p17160 Brassica napus
C07p13460 Brassica napus
CAN.G1008.50 Capsicum annuum
CAN.G1008.51 Capsicum annuum
CAN.G1089.15 Capsicum annuum
CAN.G282.73 Capsicum annuum
CANSAT11G0708 Cannabis sativa
CANSAT64G2202 Cannabis sativa
CARHR099750 Cardamine hirsuta
CARHR220090 Cardamine hirsuta
Carub.0003s2407 Capsella rubella
Carub.0007s2834 Capsella rubella
Ca_10873_v3 Cicer arietinum L.
Ca_16821_v3 Cicer arietinum L.
Ca_16822_v3 Cicer arietinum L.
CBR_g27755 Chara braunii
Cc04_g05760 Coffea canephora
Cc11_g14920 Coffea canephora
CDE06G2528 Ceratophyllum demersum
CDE09G1060 Ceratophyllum demersum
Cfa018697 Carpinus fangiana
Ciclev10005873m.g Citrus clementina
Ciclev10009608m.g Citrus clementina
Ciclev10032720m.g Citrus clementina
CiPaw.05G100000 Carya illinoinensis
CiPaw.06G110200 Carya illinoinensis
CiPaw.07G189000 Carya illinoinensis
ClCG06G001710 Citrullus lanatus
COL.COLO4_08433 Corchorus olitorius
COL.COLO4_19557 Corchorus olitorius
COL.COLO4_37270 Corchorus olitorius
Cpa.g.sc13.183 Carica papaya
Cpa.g.sc13.187 Carica papaya
CsaV3_6G007710 Cucumis sativus L.
CsaV3_6G007720 Cucumis sativus L.
CSS0014568 Camellia sinensis var. sinensis
CSS0019681 Camellia sinensis var. sinensis
CSS0019956 Camellia sinensis var. sinensis
CSS0020887 Camellia sinensis var. sinensis
CSS0043911 Camellia sinensis var. sinensis
CSS0049091 Camellia sinensis var. sinensis
DCAR_003817 Daucus carota
DCAR_016332 Daucus carota
DCAR_016333 Daucus carota
DCAR_016334 Daucus carota
Dinv42760 Davidia involucrata
Dinv43342 Davidia involucrata
Duzib052G0287 Durio zibethinus
Duzib205G0895 Durio zibethinus
EL10Ac3g06879 Beta vulgaris
EL10Ac3g06880 Beta vulgaris
EL10Ac6g13614 Beta vulgaris
Eucgr.G01981 Eucalyptus grandis
Eucgr.G01982 Eucalyptus grandis
FAN04G1708 Fragaria x ananassa
FAN07G2481 Fragaria x ananassa
FAN08G2240 Fragaria x ananassa
FAN13G1975 Fragaria x ananassa
FAN17G0263 Fragaria x ananassa
FAN17G1661 Fragaria x ananassa
FAN18G3527 Fragaria x ananassa
FAN22G1725 Fragaria x ananassa
FvH4_4g08920 Fragaria vesca
FvH4_4g22500 Fragaria vesca
FvH4_5g09720 Fragaria vesca
Glyma.04G202500 Glycine max
Glyma.05G199600 Glycine max
Glyma.06G163000 Glycine max
Gohir.A03G152600 Gossypium hirsutum
Gohir.A05G006000 Gossypium hirsutum
Gohir.A12G194150 Gossypium hirsutum
Gohir.D02G175600 Gossypium hirsutum
Gohir.D05G006800 Gossypium hirsutum
Gohir.D12G196600 Gossypium hirsutum
Gorai.005G197200 Gossypium raimondii
Gorai.008G211200 Gossypium raimondii
GSVIVG01001108001 Vitis vinifera
GSVIVG01001109001 Vitis vinifera
HanXRQChr08g0210451 Helianthus annuus
HanXRQChr09g0245111 Helianthus annuus
HanXRQChr12g0363381 Helianthus annuus
Haze_12513 Corylus avellana
Haze_22132 Corylus avellana
Hma1.2p1_0452F.1_g155910 Hydrangea macrophylla
Hma1.2p1_0452F.1_g155920 Hydrangea macrophylla
HPP92_000325 Vanilla planifolia
HPP92_011555 Vanilla planifolia
Hund15118 Selenicereus undatus
Hund15731 Selenicereus undatus
Hund15732 Selenicereus undatus
Lalb_Chr11g0069071 Lupinus albus
Lalb_Chr12g0202571 Lupinus albus
Lj1g0026174 Lotus japonicus
Lj4g0005729 Lotus japonicus
Lj5A86T67 Lonicera japonica
Lj5C86T6 Lonicera japonica
Lj6A839T36 Lonicera japonica
Lsat_1_v5_gn_1_40201 Lactuca sativa
Lsat_1_v5_gn_7_51821 Lactuca sativa
Manes.06G127500 Manihot esculenta
Manes.09G189100 Manihot esculenta
Mapoly0004s0229 Marchantia polymorpha
Mapoly0098s0003 Marchantia polymorpha
MBI15_g25772_MAGBIO Magnolia biondii
MD05G1036300 Malus domestica
MD06G1128900 Malus domestica
MD13G1132000 Malus domestica
MD13G1264800 Malus domestica
MD16G1142300 Malus domestica
Medtr3g098490 Medicago truncatula
Medtr3g098500 Medicago truncatula
Medtr8g096080 Medicago truncatula
Medtr8g096100 Medicago truncatula
Medtr8g096110 Medicago truncatula
MELO3C022360.2 Cucumis melo
MELO3C022361.2 Cucumis melo
MELO3C022362.2 Cucumis melo
Migut.I00663 Erythranthe guttata
Migut.K01045 Erythranthe guttata
MSTRG.11202 Avicennia marina
MSTRG.446 Avicennia marina
Nitab4.5_0000069g0480 Nicotiana tabacum
Nitab4.5_0000976g0190 Nicotiana tabacum
Nitab4.5_0002199g0010 Nicotiana tabacum
Nitab4.5_0007345g0080 Nicotiana tabacum
Nitab4.5_0010893g0010 Nicotiana tabacum
Nitab4.5_0012775g0010 Nicotiana tabacum
Nn3g16252 Nelumbo nucifera
Nn3g16253 Nelumbo nucifera
Nn3g16254 Nelumbo nucifera
Nn7g36412 Nelumbo nucifera
Oeu010263.1 Olea europaea
Oeu051185.1 Olea europaea
Os03g0850800 Oryza sativa ssp. japonica
Os07g0189700 Oryza sativa ssp. japonica
Os07g0189800 Oryza sativa ssp. japonica
Os07g0475000 Oryza sativa ssp. japonica
Peaxi162Scf00097g01221 Petunia axillaris
Peaxi162Scf00207g00255 Petunia axillaris
PGR102G1296 Punica granatum
PGR119G0109 Punica granatum
PGSC0003DMG400014172 Solanum tuberosum
PGSC0003DMG400016403 Solanum tuberosum
PGSC0003DMG400025574 Solanum tuberosum
Phvul.002G280800 Phaseolus vulgaris
Phvul.009G158700 Phaseolus vulgaris
Potri.001G068800 Populus trichocarpa
Potri.015G108200 Populus trichocarpa
Potri.018G096056 Populus trichocarpa
Pp3c12_9310 Physcomitrium patens
Prupe.1G092000 Prunus persica
Prupe.1G213400 Prunus persica
Prupe.5G140200 Prunus persica
Psat5g055400 Pisum sativum
Psat7g039800 Pisum sativum
PSO017G0692 Papaver somniferum
PSO017G1474 Papaver somniferum
PSO017G3245 Papaver somniferum
PSO017G4678 Papaver somniferum
PSO063G0050 Papaver somniferum
PSO063G0855 Papaver somniferum
PSO063G6992 Papaver somniferum
QL02p096844 Quercus lobata
QL03p048896 Quercus lobata
RcHm_v2.0_Chr4g0403651 Rosa chinensis
RcHm_v2.0_Chr4g0428721 Rosa chinensis
RcHm_v2.0_Chr4g0428731 Rosa chinensis
RcHm_v2.0_Chr5g0066081 Rosa chinensis
RcHm_v2.0_Chr7g0188511 Rosa chinensis
Rhsim03G0262700 Rhododendron simsii
Rhsim08G0198800 Rhododendron simsii
Rhsim12G0181400 Rhododendron simsii
Rhsim12G0181800 Rhododendron simsii
Sabra01G0048100 Salix brachista
Sabra15G0128500 Salix brachista
Sabra18G0082400 Salix brachista
SalBow2G0038 Salvia bowleyana
SalBow7G1969 Salvia bowleyana
SalBow7G2799 Salvia bowleyana
Sc08g0001820 Simmondsia chinensis
Sed0020273 Sechium edule
Sed0020506 Sechium edule
SEGI_19555 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14671 Striga asiatica
SGA_v2.0_scaffold5G02807 Striga asiatica
SMO351G0157 Selaginella moellendorffii
SMO351G0496 Selaginella moellendorffii
Solyc01g008100.3 Solanum lycopersicum
Solyc03g118120.3 Solanum lycopersicum
Solyc06g068750.3 Solanum lycopersicum
Sopen01g003650 Solanum pennellii
Sopen03g037020 Solanum pennellii
Sopen06g026030 Solanum pennellii
Sp3g21470 Schrenkiella parvula
Sp7g11890 Schrenkiella parvula
TAR374G0720 Trochodendron aralioides
TAR625G0837 Trochodendron aralioides
THA.LOC104803400 Tarenaya hassleriana
THA.LOC104804786 Tarenaya hassleriana
Thecc.02G190800 Theobroma cacao
Thecc.03G141900 Theobroma cacao
Thecc.09G166100 Theobroma cacao
Thhalv10002677m.g Eutrema salsugineum
Thhalv10026167m.g Eutrema salsugineum
TPR.G11384 Trifolium pratense
TPR.G12858 Trifolium pratense
TWI23G0256 Tripterygium wilfordii
TWI36G0766 Tripterygium wilfordii
vmacro06031 Vaccinium macrocarpon
vmacro19111 Vaccinium macrocarpon
VMungo0251G0878 Vigna mungo
Zm00001eb064550 Zea mays
Zm00001eb302350 Zea mays
Zm00001eb302360 Zea mays
Zm00001eb320010 Zea mays

User provided reference genes

Program Settings