Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p16030 Brassica napus
A03p55960 Brassica napus
A04p33920 Brassica napus
Aa31LG1G27080 Aethionema arabicum
Aa31LG3G8220 Aethionema arabicum
Aa31sc16G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3596 Anthoceros agrestis
Actinidia03092 Actinidia chinensis
Actinidia03093 Actinidia chinensis
Actinidia09571 Actinidia chinensis
Actinidia14210 Actinidia chinensis
Actinidia14211 Actinidia chinensis
Actinidia31442 Actinidia chinensis
Ah.05g175500 Amaranthus hybridus
Ah.07g208520 Amaranthus hybridus
AL4G44760 Arabidopsis lyrata
AL7G27740 Arabidopsis lyrata
AL8G26060 Arabidopsis lyrata
Aqoxy7G00519 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6X863X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BZ2RGS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I81MIY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QEF8WS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RBWH0U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1M1TV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WHVZ2S Arachis hypogaea
AT2G45590 Arabidopsis thaliana
AT4G25390 Arabidopsis thaliana
AT5G51770 Arabidopsis thaliana
ATR0661G458 Amborella trichopoda
Atru.chr1.589 Acer truncatum
Atru.chr5.358 Acer truncatum
AUR62016074 Chenopodium quinoa
AUR62021283 Chenopodium quinoa
BcaB01g04156 Brassica carinata
BcaB06g29412 Brassica carinata
BcaC01g06138 Brassica carinata
BcaC02g07080 Brassica carinata
BcaC06g32814 Brassica carinata
BolC3t14277H Brassica oleracea
BolC4t28672H Brassica oleracea
BolC7t45913H Brassica oleracea
BraA03t10894Z Brassica rapa
BraA03t14668Z Brassica rapa
BraA04t18853Z Brassica rapa
C03p18860 Brassica napus
C04p71730 Brassica napus
C07p54270 Brassica napus
CAN.G1283.3 Capsicum annuum
CAN.G1561.13 Capsicum annuum
CANSAT56G3690 Cannabis sativa
CANSAT80G1926 Cannabis sativa
CARHR140810 Cardamine hirsuta
CARHR232800 Cardamine hirsuta
CARHR264650 Cardamine hirsuta
Carub.0004s2823 Capsella rubella
Carub.0007s1562 Capsella rubella
Carub.0008s1179 Capsella rubella
Ca_10825_v3 Cicer arietinum L.
Ca_19539_v3 Cicer arietinum L.
Ca_23819_v3 Cicer arietinum L.
Cc02_g03680 Coffea canephora
Cc02_g36360 Coffea canephora
CDE02G1199 Ceratophyllum demersum
CDE02G1614 Ceratophyllum demersum
CDE02G2657 Ceratophyllum demersum
CDE02G3927 Ceratophyllum demersum
Cfa001831 Carpinus fangiana
Cfa008250 Carpinus fangiana
Ciclev10004535m.g Citrus clementina
Ciclev10019199m.g Citrus clementina
CiPaw.01G259500 Carya illinoinensis
CiPaw.02G165200 Carya illinoinensis
CiPaw.03G098800 Carya illinoinensis
CiPaw.14G085100 Carya illinoinensis
ClCG06G000260 Citrullus lanatus
COL.COLO4_12593 Corchorus olitorius
COL.COLO4_14214 Corchorus olitorius
Cpa.g.c40487 Carica papaya
Cpa.g.sc18.157 Carica papaya
CsaV3_3G016550 Cucumis sativus L.
CsaV3_6G006050 Cucumis sativus L.
CSS0009486 Camellia sinensis var. sinensis
CSS0048703 Camellia sinensis var. sinensis
CSS0049744 Camellia sinensis var. sinensis
DCAR_006885 Daucus carota
DCAR_009412 Daucus carota
DCAR_018137 Daucus carota
Dinv08004 Davidia involucrata
Dinv28515 Davidia involucrata
Dinv32400 Davidia involucrata
Duzib068G1169 Durio zibethinus
Duzib138G1951 Durio zibethinus
ECA236G2921 Erigeron canadensis
ECA248G3849 Erigeron canadensis
EL10Ac3g05758 Beta vulgaris
Eucgr.E01348 Eucalyptus grandis
Eucgr.K00180 Eucalyptus grandis
FAN01G0326 Fragaria x ananassa
FAN01G3151 Fragaria x ananassa
FAN03G0865 Fragaria x ananassa
FAN03G2171 Fragaria x ananassa
FAN03G3400 Fragaria x ananassa
FAN06G1950 Fragaria x ananassa
FAN06G2316 Fragaria x ananassa
FAN06G2708 Fragaria x ananassa
FAN06G3646 Fragaria x ananassa
FAN10G1360 Fragaria x ananassa
FAN10G1952 Fragaria x ananassa
FAN10G2318 Fragaria x ananassa
FAN10G3321 Fragaria x ananassa
FAN20G1064 Fragaria x ananassa
FvH4_7g12490 Fragaria vesca
FvH4_7g28580 Fragaria vesca
Glyma.03G020700 Glycine max
Glyma.07G082600 Glycine max
Glyma.09G150100 Glycine max
Glyma.10G241500 Glycine max
Glyma.16G201500 Glycine max
Glyma.20G152800 Glycine max
Gohir.A09G043200 Gossypium hirsutum
Gohir.A11G083100 Gossypium hirsutum
Gohir.A12G263000 Gossypium hirsutum
Gohir.D09G044600 Gossypium hirsutum
Gohir.D11G087200 Gossypium hirsutum
Gohir.D12G263500 Gossypium hirsutum
Gorai.006G066000 Gossypium raimondii
Gorai.007G093100 Gossypium raimondii
Gorai.008G282500 Gossypium raimondii
GSVIVG01018462001 Vitis vinifera
GSVIVG01027564001 Vitis vinifera
HanXRQChr06g0169251 Helianthus annuus
HanXRQChr07g0206711 Helianthus annuus
HanXRQChr14g0461871 Helianthus annuus
Haze_13801 Corylus avellana
Haze_16724 Corylus avellana
Hma1.2p1_0012F.1_g007780 Hydrangea macrophylla
Hma1.2p1_0099F.1_g048790 Hydrangea macrophylla
HPP92_001550 Vanilla planifolia
HPP92_003299 Vanilla planifolia
Hund11786 Selenicereus undatus
Lalb_Chr01g0008901 Lupinus albus
Lalb_Chr02g0140831 Lupinus albus
Lalb_Chr03g0032971 Lupinus albus
Lalb_Chr07g0189541 Lupinus albus
Lj1A986T54 Lonicera japonica
Lj2g0005098 Lotus japonicus
Lj3g0003838 Lotus japonicus
Lj5g0023907 Lotus japonicus
Lj9C573T7 Lonicera japonica
Lsat_1_v5_gn_2_130000 Lactuca sativa
Lsat_1_v5_gn_4_93861 Lactuca sativa
Lsat_1_v5_gn_6_2160 Lactuca sativa
Lsat_1_v5_gn_7_6720 Lactuca sativa
Manes.05G043100 Manihot esculenta
Manes.06G140400 Manihot esculenta
MD02G1198700 Malus domestica
MD12G1112300 Malus domestica
Medtr0007s0390 Medicago truncatula
Medtr1g102360 Medicago truncatula
Medtr8g035560 Medicago truncatula
MELO3C006853.2 Cucumis melo
MELO3C022512.2 Cucumis melo
Migut.B01661 Erythranthe guttata
Migut.F00406 Erythranthe guttata
MSTRG.20772 Avicennia marina
MSTRG.27156 Avicennia marina
MSTRG.8786 Avicennia marina
Nitab4.5_0000072g0030 Nicotiana tabacum
Nitab4.5_0001757g0010 Nicotiana tabacum
Nitab4.5_0002436g0080 Nicotiana tabacum
Nitab4.5_0005340g0010 Nicotiana tabacum
Nn1g01149 Nelumbo nucifera
Nn6g34342 Nelumbo nucifera
Oeu022524.1 Olea europaea
Oeu026239.1 Olea europaea
Oeu030153.1 Olea europaea
Oeu039229.2 Olea europaea
Oeu042592.2 Olea europaea
Os03g0251700 Oryza sativa ssp. japonica
Os10g0187500 Oryza sativa ssp. japonica
Peaxi162Scf00192g00719 Petunia axillaris
Peaxi162Scf00988g00033 Petunia axillaris
PGR042G2386 Punica granatum
PGR142G1763 Punica granatum
PGSC0003DMG400000140 Solanum tuberosum
PGSC0003DMG400007560 Solanum tuberosum
Phvul.004G124400 Phaseolus vulgaris
Phvul.007G064200 Phaseolus vulgaris
Phvul.010G086600 Phaseolus vulgaris
Potri.002G150800 Populus trichocarpa
Potri.012G131900 Populus trichocarpa
Potri.014G072900 Populus trichocarpa
Potri.015G134100 Populus trichocarpa
Prupe.2G149500 Prunus persica
Prupe.2G285800 Prunus persica
Psat0s148g0080 Pisum sativum
Psat4g150400 Pisum sativum
Psat6g203640 Pisum sativum
PSO478G0436 Papaver somniferum
PSO782G1909 Papaver somniferum
QL08p050988 Quercus lobata
QL08p051566 Quercus lobata
QL12p039040 Quercus lobata
RcHm_v2.0_Chr1g0351331 Rosa chinensis
RcHm_v2.0_Chr1g0375991 Rosa chinensis
Rhsim03G0173600 Rhododendron simsii
Rhsim07G0024000 Rhododendron simsii
Rhsim09G0194700 Rhododendron simsii
Sabra02G0119200 Salix brachista
Sabra12G0099200 Salix brachista
Sabra14G0052100 Salix brachista
Sabra15G0146300 Salix brachista
SalBow4G0996 Salvia bowleyana
SalBow7G4433 Salvia bowleyana
Sc02g0002380 Simmondsia chinensis
Sc25g0000240 Simmondsia chinensis
Sed0009734 Sechium edule
Sed0012900 Sechium edule
Sed0014449 Sechium edule
SEGI_25870 Sequoiadendron giganteum
SGA_v2.0_scaffold221G42749 Striga asiatica
SGA_v2.0_scaffold2G01103 Striga asiatica
SGA_v2.0_scaffold95G28884 Striga asiatica
SHI13844 Sapria himalayana
Solyc01g094020.3 Solanum lycopersicum
Solyc03g006920.2 Solanum lycopersicum
Sopen01g037840 Solanum pennellii
Sopen03g002920 Solanum pennellii
Sp4g27640 Schrenkiella parvula
Sp6g13990 Schrenkiella parvula
Sp7g23410 Schrenkiella parvula
TAR374G0534 Trochodendron aralioides
TAR375G0908 Trochodendron aralioides
THA.LOC104811501 Tarenaya hassleriana
THA.LOC104817262 Tarenaya hassleriana
Thecc.01G372500 Theobroma cacao
Thecc.03G165600 Theobroma cacao
Thhalv10001343m.g Eutrema salsugineum
Thhalv10015950m.g Eutrema salsugineum
TPR.G17406 Trifolium pratense
TPR.G26591 Trifolium pratense
TPR.G30882 Trifolium pratense
TWI23G1008 Tripterygium wilfordii
TWI23G1067 Tripterygium wilfordii
TWI59G0625 Tripterygium wilfordii
vmacro09875 Vaccinium macrocarpon
vmacro13367 Vaccinium macrocarpon
vmacro22938 Vaccinium macrocarpon
VMungo0331G0090 Vigna mungo
VMungo0331G1141 Vigna mungo
VMungo0464G2110 Vigna mungo
VMungo0720G1306 Vigna mungo
VMungo1080G1363 Vigna mungo
Zm00001eb010820 Zea mays

User provided reference genes

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