Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p07300 Brassica napus
A08p19040 Brassica napus
A10p13840 Brassica napus
Aa31LG2G19500 Aethionema arabicum
Aa31sc407G10 Aethionema arabicum
Actinidia16366 Actinidia chinensis
Actinidia19441 Actinidia chinensis
Ah.12g065190 Amaranthus hybridus
AL1G46440 Arabidopsis lyrata
AL7G17970 Arabidopsis lyrata
AL7G21220 Arabidopsis lyrata
AL8G32240 Arabidopsis lyrata
Aqoxy1G01092 Aquilegia oxysepala
Aqoxy2G00278 Aquilegia oxysepala
Aqoxy2G00280 Aquilegia oxysepala
Aqoxy2G00281 Aquilegia oxysepala
Aqoxy2G00284 Aquilegia oxysepala
Aqoxy2G00287 Aquilegia oxysepala
Aqoxy2G02507 Aquilegia oxysepala
Aqoxy4G02010 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7A4EFU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K6R24J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YF5LNJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZFJ3WN Arachis hypogaea
AT1G32280 Arabidopsis thaliana
AT4G30880 Arabidopsis thaliana
AT4G33550 Arabidopsis thaliana
AT5G56480 Arabidopsis thaliana
ATR0721G099 Amborella trichopoda
ATR0721G102 Amborella trichopoda
ATR0721G129 Amborella trichopoda
ATR0721G147 Amborella trichopoda
Atru.chr6.1312 Acer truncatum
AUR62026812 Chenopodium quinoa
AUR62037241 Chenopodium quinoa
BcaB03g12664 Brassica carinata
BcaB03g12793 Brassica carinata
BcaB03g12794 Brassica carinata
BcaB05g22276 Brassica carinata
BcaC01g00985 Brassica carinata
BcaC01g00986 Brassica carinata
BcaC01g01134 Brassica carinata
BcaC04g20084 Brassica carinata
BcaC04g20086 Brassica carinata
BcaC09g51875 Brassica carinata
BcaNung03432 Brassica carinata
BolC1t00795H Brassica oleracea
BolC3t21155H Brassica oleracea
BolC9t57655H Brassica oleracea
BraA01t00679Z Brassica rapa
BraA08t33865Z Brassica rapa
BraA10t43477Z Brassica rapa
C01p08060 Brassica napus
C03p88470 Brassica napus
C09p48080 Brassica napus
CANSAT80G1481 Cannabis sativa
CARHR238780 Cardamine hirsuta
CARHR241650 Cardamine hirsuta
CARHR270120 Cardamine hirsuta
CARHR270130 Cardamine hirsuta
Carub.0001s3061 Capsella rubella
Carub.0007s0690 Capsella rubella
Carub.0007s0967 Capsella rubella
Ca_11246_v3 Cicer arietinum L.
Cc02_g29460 Coffea canephora
Cfa009830 Carpinus fangiana
Cfa021004 Carpinus fangiana
Ciclev10017226m.g Citrus clementina
Ciclev10017233m.g Citrus clementina
Ciclev10017249m.g Citrus clementina
Ciclev10017446m.g Citrus clementina
Ciclev10017598m.g Citrus clementina
Ciclev10017652m.g Citrus clementina
Ciclev10018012m.g Citrus clementina
CiPaw.13G010000 Carya illinoinensis
CiPaw.13G010100 Carya illinoinensis
CiPaw.13G153200 Carya illinoinensis
COL.COLO4_04118 Corchorus olitorius
COL.COLO4_36502 Corchorus olitorius
Cpa.g.sc1008.2 Carica papaya
Cpa.g.sc84.10 Carica papaya
Cpa.g.sc84.11 Carica papaya
CSS0000269 Camellia sinensis var. sinensis
CSS0014844 Camellia sinensis var. sinensis
CSS0046368 Camellia sinensis var. sinensis
CSS0048223 Camellia sinensis var. sinensis
DCAR_022358 Daucus carota
Dinv36202 Davidia involucrata
Duzib168G0444 Durio zibethinus
Duzib168G0958 Durio zibethinus
ECA236G2864 Erigeron canadensis
ECA238G2259 Erigeron canadensis
EL10Ac2g02871 Beta vulgaris
EL10Ac2g02872 Beta vulgaris
EL10Ac4g08094 Beta vulgaris
Eucgr.G03260 Eucalyptus grandis
FAN06G1024 Fragaria x ananassa
FAN10G1712 Fragaria x ananassa
FvH4_3g29300 Fragaria vesca
FvH4_7g02210 Fragaria vesca
Glyma.04G138700 Glycine max
Glyma.11G095900 Glycine max
Glyma.12G022000 Glycine max
Glyma.14G018800 Glycine max
Glyma.14G018900 Glycine max
Gohir.A07G121800 Gossypium hirsutum
Gohir.D07G126100 Gossypium hirsutum
Gorai.001G136100 Gossypium raimondii
GSVIVG01000854001 Vitis vinifera
GSVIVG01000855001 Vitis vinifera
GSVIVG01000856001 Vitis vinifera
HanXRQChr01g0020811 Helianthus annuus
HanXRQChr14g0441021 Helianthus annuus
Haze_18708 Corylus avellana
Haze_23193 Corylus avellana
Hma1.2p1_0817F.1_g223085 Hydrangea macrophylla
Hma1.2p1_2313F.1_g319610 Hydrangea macrophylla
HPP92_003585 Vanilla planifolia
Hund15707 Selenicereus undatus
Lalb_Chr04g0263901 Lupinus albus
Lj1g0024813 Lotus japonicus
Lj1g0028228 Lotus japonicus
Lj3g0006865 Lotus japonicus
Lj4g0026950 Lotus japonicus
Lsat_1_v5_gn_1_97381 Lactuca sativa
Manes.04G135500 Manihot esculenta
Manes.11G031500 Manihot esculenta
Manes.14G006000 Manihot esculenta
Manes.14G006100 Manihot esculenta
MBI13_g04764_MAGBIO Magnolia biondii
MD02G1296300 Malus domestica
MD02G1296400 Malus domestica
Medtr4g076150 Medicago truncatula
Medtr4g077180 Medicago truncatula
Medtr5g093780 Medicago truncatula
Medtr5g093800 Medicago truncatula
Medtr5g093820 Medicago truncatula
Medtr7g083580 Medicago truncatula
Migut.D00661 Erythranthe guttata
Migut.D00663 Erythranthe guttata
Migut.D00796 Erythranthe guttata
MSTRG.21276 Avicennia marina
Nn2g15045 Nelumbo nucifera
Nn2g15046 Nelumbo nucifera
Nn7g36442 Nelumbo nucifera
Nn7g36443 Nelumbo nucifera
Nn7g36457 Nelumbo nucifera
Nn7g36459 Nelumbo nucifera
Nn7g36463 Nelumbo nucifera
Nn7g36466 Nelumbo nucifera
Nn7g36467 Nelumbo nucifera
Nn7g38448 Nelumbo nucifera
Nn7g38449 Nelumbo nucifera
Oeu027475.1 Olea europaea
Os01g0800600 Oryza sativa ssp. japonica
Os03g0369100 Oryza sativa ssp. japonica
Os10g0148000 Oryza sativa ssp. japonica
Os11g0484700 Oryza sativa ssp. japonica
PGR031G2149 Punica granatum
PGR031G3191 Punica granatum
Phvul.005G033100 Phaseolus vulgaris
Phvul.008G271900 Phaseolus vulgaris
Phvul.011G024000 Phaseolus vulgaris
Potri.001G023200 Populus trichocarpa
Potri.001G023300 Populus trichocarpa
Potri.009G048800 Populus trichocarpa
Potri.009G048900 Populus trichocarpa
Potri.009G049000 Populus trichocarpa
Potri.009G049300 Populus trichocarpa
Prupe.2G028100 Prunus persica
Prupe.2G028300 Prunus persica
Prupe.4G257900 Prunus persica
Psat0s1041g0040 Pisum sativum
Psat1g033960 Pisum sativum
Psat1g130000 Pisum sativum
Psat2g010760 Pisum sativum
Psat3g094440 Pisum sativum
Psat3g094480 Pisum sativum
Psat7g179880 Pisum sativum
PSO339G0161 Papaver somniferum
PSO339G0568 Papaver somniferum
PSO339G1495 Papaver somniferum
PSO339G2204 Papaver somniferum
PSO339G3199 Papaver somniferum
PSO339G4823 Papaver somniferum
PSO339G6632 Papaver somniferum
PSO349G0096 Papaver somniferum
PSO349G0104 Papaver somniferum
PSO349G0133 Papaver somniferum
PSO349G0264 Papaver somniferum
PSO384G0435 Papaver somniferum
PSO384G1774 Papaver somniferum
PSO384G1869 Papaver somniferum
PSO384G1879 Papaver somniferum
PSO384G3246 Papaver somniferum
PSO384G3480 Papaver somniferum
PSO384G3631 Papaver somniferum
PSO384G3657 Papaver somniferum
PSO765G0023 Papaver somniferum
QL01p017875 Quercus lobata
QL01p026933 Quercus lobata
QL01p026935 Quercus lobata
QL04p013222 Quercus lobata
QL04p013227 Quercus lobata
QL04p013233 Quercus lobata
QL04p013238 Quercus lobata
QL04p013244 Quercus lobata
QL04p013260 Quercus lobata
QL04p013280 Quercus lobata
QL04p013297 Quercus lobata
RcHm_v2.0_Chr7g0218541 Rosa chinensis
Rhsim07G0062000 Rhododendron simsii
Sabra01G0017500 Salix brachista
Sabra01G0017600 Salix brachista
Sabra09G0035200 Salix brachista
Sabra09G0035300 Salix brachista
Sabra09G0035400 Salix brachista
Sabra09G0035500 Salix brachista
Sc10g0004220 Simmondsia chinensis
Sc14g0005800 Simmondsia chinensis
SGA_v2.0_scaffold24G10703 Striga asiatica
SMO134G0150 Selaginella moellendorffii
SMO145G0015 Selaginella moellendorffii
SMO145G0105 Selaginella moellendorffii
Sp7g28750 Schrenkiella parvula
Sp7g31290 Schrenkiella parvula
TAR622G0220 Trochodendron aralioides
TAR623G0756 Trochodendron aralioides
TAR623G1716 Trochodendron aralioides
THA.LOC104800444 Tarenaya hassleriana
THA.LOC104819118 Tarenaya hassleriana
THA.LOC104826487 Tarenaya hassleriana
THA.LOC104826714 Tarenaya hassleriana
Thecc.09G243000 Theobroma cacao
Thecc.09G243100 Theobroma cacao
Thhalv10026604m.g Eutrema salsugineum
Thhalv10026851m.g Eutrema salsugineum
TPR.G22564 Trifolium pratense
TPR.G35351 Trifolium pratense
TPR.G35352 Trifolium pratense
TPR.G35362 Trifolium pratense
TPR.G40003 Trifolium pratense
TWI38G1066 Tripterygium wilfordii
TWI74G0698 Tripterygium wilfordii
unitig_60.g25717 Utricularia gibba
vmacro13721 Vaccinium macrocarpon
VMungo0647G0462 Vigna mungo
VMungo1080G0282 Vigna mungo
VMungo1080G0496 Vigna mungo
VMungo1127G0532 Vigna mungo
Zm00001eb138660 Zea mays
Zm00001eb224160 Zea mays
Zm00001eb369440 Zea mays
Zm00001eb369450 Zea mays
Zm00001eb419140 Zea mays
Zm00001eb419150 Zea mays

User provided reference genes

Program Settings