Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p30640 Brassica napus
A07p37830 Brassica napus
Aa31LG4G8990 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4285 Anthoceros agrestis
Ah.05g168140 Amaranthus hybridus
AL2G31240 Arabidopsis lyrata
Aqoxy5G02042 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GW0MEP Arachis hypogaea
AT1G71695 Arabidopsis thaliana
ATR0180G022 Amborella trichopoda
ATR0584G140 Amborella trichopoda
ATR0584G264 Amborella trichopoda
Atru.chr13.2037 Acer truncatum
Atru.chr13.2040 Acer truncatum
AUR62026662 Chenopodium quinoa
AUR62026663 Chenopodium quinoa
AUR62026664 Chenopodium quinoa
AUR62026665 Chenopodium quinoa
AUR62026666 Chenopodium quinoa
AUR62026667 Chenopodium quinoa
AUR62040569 Chenopodium quinoa
AUR62040570 Chenopodium quinoa
AUR62040571 Chenopodium quinoa
AUR62040572 Chenopodium quinoa
AUR62040573 Chenopodium quinoa
AUR62040574 Chenopodium quinoa
AUR62044431 Chenopodium quinoa
BcaB03g15613 Brassica carinata
BcaC08g45765 Brassica carinata
BcaC08g46593 Brassica carinata
BolC6t38669H Brassica oleracea
BolC6t39623H Brassica oleracea
BraA07t30699Z Brassica rapa
BraA07t31347Z Brassica rapa
C06p35480 Brassica napus
C06p45730 Brassica napus
CAN.G16319.1 Capsicum annuum
CAN.G1990.1 Capsicum annuum
CAN.G1990.2 Capsicum annuum
CAN.G495.2 Capsicum annuum
CAN.G495.3 Capsicum annuum
CAN.G495.4 Capsicum annuum
CANSAT25G0476 Cannabis sativa
CANSAT25G1557 Cannabis sativa
CARHR291110 Cardamine hirsuta
Carub.0002s1844 Capsella rubella
Ca_10669_v3 Cicer arietinum L.
Ca_27486_v3 Cicer arietinum L.
Cc02_g30380 Coffea canephora
Cc10_g15130 Coffea canephora
Cc10_g15140 Coffea canephora
Cc10_g15150 Coffea canephora
CDE04G1059 Ceratophyllum demersum
Cfa018291 Carpinus fangiana
Cfa018292 Carpinus fangiana
Cfa018293 Carpinus fangiana
Ciclev10001726m.g Citrus clementina
CiPaw.15G013400 Carya illinoinensis
CiPaw.15G013600 Carya illinoinensis
CiPaw.15G013700 Carya illinoinensis
CiPaw.16G009200 Carya illinoinensis
Cpa.g.sc49.84 Carica papaya
CSS0009572 Camellia sinensis var. sinensis
CSS0019730 Camellia sinensis var. sinensis
CSS0026112 Camellia sinensis var. sinensis
CSS0038072 Camellia sinensis var. sinensis
CSS0050479 Camellia sinensis var. sinensis
DCAR_001157 Daucus carota
DCAR_014449 Daucus carota
DCAR_014450 Daucus carota
DCAR_014451 Daucus carota
DCAR_014452 Daucus carota
DCAR_014453 Daucus carota
Dinv25888 Davidia involucrata
Dinv25889 Davidia involucrata
Dinv41047 Davidia involucrata
Duzib041G0415 Durio zibethinus
Duzib116G0377 Durio zibethinus
ECA246G0909 Erigeron canadensis
ECA246G1728 Erigeron canadensis
ECA246G4682 Erigeron canadensis
ECA247G3390 Erigeron canadensis
EL10Ac1g01598 Beta vulgaris
EL10Ac1g01601 Beta vulgaris
EL10Ac1g01603 Beta vulgaris
Eucgr.F04195 Eucalyptus grandis
Eucgr.F04198 Eucalyptus grandis
Eucgr.L02740 Eucalyptus grandis
FAN15G2902 Fragaria x ananassa
FAN20G1222 Fragaria x ananassa
FAN27G0345 Fragaria x ananassa
FvH4_2g13110 Fragaria vesca
Glyma.02G079800 Glycine max
Glyma.10G222400 Glycine max
Glyma.10G222500 Glycine max
Glyma.16G164200 Glycine max
Glyma.16G164300 Glycine max
Glyma.16G164400 Glycine max
Glyma.20G169200 Glycine max
Gohir.A02G063000 Gossypium hirsutum
Gohir.A06G111202 Gossypium hirsutum
Gohir.D02G068700 Gossypium hirsutum
Gohir.D06G115300 Gossypium hirsutum
Gorai.005G077600 Gossypium raimondii
Gorai.010G131800 Gossypium raimondii
GSVIVG01034574001 Vitis vinifera
HanXRQChr01g0001191 Helianthus annuus
HanXRQChr02g0042661 Helianthus annuus
HanXRQChr05g0162331 Helianthus annuus
HanXRQChr10g0278571 Helianthus annuus
HanXRQChr10g0278591 Helianthus annuus
Haze_17779 Corylus avellana
Haze_17780 Corylus avellana
Haze_17795 Corylus avellana
Haze_17796 Corylus avellana
Hma1.2p1_0081F.1_g042520 Hydrangea macrophylla
Hma1.2p1_0240F.1_g100490 Hydrangea macrophylla
Hma1.2p1_0240F.1_g100500 Hydrangea macrophylla
Hma1.2p1_0240F.1_g100510 Hydrangea macrophylla
HPP92_019362 Vanilla planifolia
Hund17473 Selenicereus undatus
Hund17475 Selenicereus undatus
Hund17476 Selenicereus undatus
Hund17477 Selenicereus undatus
Hund26680 Selenicereus undatus
Lalb_Chr03g0035481 Lupinus albus
Lalb_Chr19g0130141 Lupinus albus
Lj2g0004423 Lotus japonicus
Lj5g0006927 Lotus japonicus
Lj5g0020193 Lotus japonicus
Lj7A379G39 Lonicera japonica
Lj7A379T38 Lonicera japonica
Lj7A381G33 Lonicera japonica
Lj7A382T68 Lonicera japonica
Lj7C381G1 Lonicera japonica
Lj7C381G6 Lonicera japonica
Lj7C381T9 Lonicera japonica
Lsat_1_v5_gn_1_5661 Lactuca sativa
Lsat_1_v5_gn_6_101780 Lactuca sativa
Lsat_1_v5_gn_6_101900 Lactuca sativa
Manes.02G182500 Manihot esculenta
Manes.02G184500 Manihot esculenta
Manes.02G184600 Manihot esculenta
Manes.02G184700 Manihot esculenta
Manes.02G184800 Manihot esculenta
Manes.02G185000 Manihot esculenta
Manes.18G094101 Manihot esculenta
Manes.18G095800 Manihot esculenta
Mapoly0064s0027 Marchantia polymorpha
MBI09_g30441_MAGBIO Magnolia biondii
MBI09_g33839_MAGBIO Magnolia biondii
MBI09_g40168_MAGBIO Magnolia biondii
MBI09_g42355_MAGBIO Magnolia biondii
MBI09_g42501_MAGBIO Magnolia biondii
MD00G1190800 Malus domestica
MD10G1033300 Malus domestica
Medtr1g098320 Medicago truncatula
Medtr6g043240 Medicago truncatula
Medtr6g043280 Medicago truncatula
Medtr6g043460 Medicago truncatula
Migut.C00965 Erythranthe guttata
MSTRG.25303 Avicennia marina
Nitab4.5_0000099g0080 Nicotiana tabacum
Nitab4.5_0000099g0090 Nicotiana tabacum
Nitab4.5_0000099g0140 Nicotiana tabacum
Nitab4.5_0005691g0010 Nicotiana tabacum
Nitab4.5_0005691g0020 Nicotiana tabacum
Nitab4.5_0012758g0010 Nicotiana tabacum
Nn1g06019 Nelumbo nucifera
Nn5g29372 Nelumbo nucifera
Oeu051277.1 Olea europaea
Oeu051278.1 Olea europaea
Oeu051279.1 Olea europaea
Os01g0962700 Oryza sativa ssp. japonica
Os01g0963000 Oryza sativa ssp. japonica
Os04g0688100 Oryza sativa ssp. japonica
Peaxi162Scf00079g01915 Petunia axillaris
Peaxi162Scf00360g00011 Petunia axillaris
Peaxi162Scf00360g00117 Petunia axillaris
PGR044G1884 Punica granatum
PGSC0003DMG400025084 Solanum tuberosum
PGSC0003DMG401025083 Solanum tuberosum
PGSC0003DMG402025083 Solanum tuberosum
Phvul.004G090800 Phaseolus vulgaris
Phvul.007G082600 Phaseolus vulgaris
Phvul.007G082700 Phaseolus vulgaris
Potri.002G065300 Populus trichocarpa
Potri.005G195600 Populus trichocarpa
Potri.005G195700 Populus trichocarpa
Prupe.8G038900 Prunus persica
Psat6g191000 Pisum sativum
PSO170G3906 Papaver somniferum
PSO170G5327 Papaver somniferum
PSO170G5901 Papaver somniferum
PSO210G1444 Papaver somniferum
PSO210G2283 Papaver somniferum
PSO210G4331 Papaver somniferum
PSO700G0078 Papaver somniferum
PSO700G0150 Papaver somniferum
PSO700G0374 Papaver somniferum
QL02p038292 Quercus lobata
RcHm_v2.0_Chr6g0274401 Rosa chinensis
Rhsim10G0153800 Rhododendron simsii
Rhsim11G0087000 Rhododendron simsii
Sabra05G0149100 Salix brachista
Sabra05G0149200 Salix brachista
SalBow7G0747 Salvia bowleyana
Sc20g0003670 Simmondsia chinensis
Sc20g0003690 Simmondsia chinensis
Sc20g0003760 Simmondsia chinensis
SEGI_01074 Sequoiadendron giganteum
SEGI_02805 Sequoiadendron giganteum
SEGI_03539 Sequoiadendron giganteum
SEGI_04548 Sequoiadendron giganteum
SEGI_07376 Sequoiadendron giganteum
SEGI_10405 Sequoiadendron giganteum
SEGI_10467 Sequoiadendron giganteum
SEGI_11151 Sequoiadendron giganteum
SEGI_11876 Sequoiadendron giganteum
SEGI_12326 Sequoiadendron giganteum
SEGI_13017 Sequoiadendron giganteum
SEGI_16050 Sequoiadendron giganteum
SEGI_16942 Sequoiadendron giganteum
SEGI_17493 Sequoiadendron giganteum
SEGI_22592 Sequoiadendron giganteum
SEGI_26609 Sequoiadendron giganteum
SEGI_36315 Sequoiadendron giganteum
SEGI_37513 Sequoiadendron giganteum
SGA_v2.0_scaffold195G40778 Striga asiatica
SHI09084 Sapria himalayana
SMO164G0238 Selaginella moellendorffii
SMO351G0207 Selaginella moellendorffii
Solyc04g071890.3 Solanum lycopersicum
Solyc04g071900.4 Solanum lycopersicum
Sopen04g027870 Solanum pennellii
Sopen04g027880 Solanum pennellii
Sp5g26710 Schrenkiella parvula
TAR381G1440 Trochodendron aralioides
TAR628G0870 Trochodendron aralioides
TAR628G1307 Trochodendron aralioides
Thecc.08G157900 Theobroma cacao
Thhalv10018753m.g Eutrema salsugineum
TPR.G15331 Trifolium pratense
TPR.G15344 Trifolium pratense
TPR.G17043 Trifolium pratense
TWI32G0408 Tripterygium wilfordii
TWI34G1565 Tripterygium wilfordii
vmacro01485 Vaccinium macrocarpon
vmacro01487 Vaccinium macrocarpon
VMungo0326G0001 Vigna mungo
VMungo0464G0088 Vigna mungo
VMungo0464G0993 Vigna mungo
VMungo0720G0636 Vigna mungo
VMungo0720G2933 Vigna mungo
Zm00001eb076170 Zea mays
Zm00001eb076180 Zea mays
Zm00001eb140290 Zea mays
Zm00001eb140320 Zea mays

User provided reference genes

Program Settings