Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25490 Brassica napus
A04p34290 Brassica napus
A05p01670 Brassica napus
A08p37750 Brassica napus
Aa31LG1G10800 Aethionema arabicum
Aa31LG1G27540 Aethionema arabicum
Actinidia02817 Actinidia chinensis
Actinidia20166 Actinidia chinensis
Ah.05g180130 Amaranthus hybridus
AL1G10940 Arabidopsis lyrata
AL4G45390 Arabidopsis lyrata
Aqoxy1G00144 Aquilegia oxysepala
Aqoxy2G03633 Aquilegia oxysepala
Aqoxy5G03616 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5K3X9F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AI0VCX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GR5MMQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P4KHGY Arachis hypogaea
AT1G01470 Arabidopsis thaliana
AT2G46140 Arabidopsis thaliana
ATR0721G031 Amborella trichopoda
Atru.chr2.3352 Acer truncatum
Atru.chr5.566 Acer truncatum
Atru.chr5.585 Acer truncatum
AUR62004416 Chenopodium quinoa
AUR62022622 Chenopodium quinoa
AUR62022623 Chenopodium quinoa
BcaB01g03236 Brassica carinata
BcaB01g06149 Brassica carinata
BcaB03g13520 Brassica carinata
BcaC01g05092 Brassica carinata
BcaC02g07023 Brassica carinata
BcaC02g12496 Brassica carinata
BcaC02g12711 Brassica carinata
BcaC07g42784 Brassica carinata
BolC3t12567H Brassica oleracea
BolC3t15390H Brassica oleracea
BraA03t11767Z Brassica rapa
BraA04t18890Z Brassica rapa
BraA05t19163Z Brassica rapa
BraA08t35672Z Brassica rapa
C03p00060 Brassica napus
C03p30420 Brassica napus
C04p01910 Brassica napus
C04p72110 Brassica napus
CAN.G17668.1 Capsicum annuum
CAN.G3870.1 Capsicum annuum
CAN.G78.132 Capsicum annuum
CAN.G91.11 Capsicum annuum
CANSAT56G1473 Cannabis sativa
CARHR000900 Cardamine hirsuta
CARHR141420 Cardamine hirsuta
Carub.0001s0077 Capsella rubella
Carub.0004s2882 Capsella rubella
Ca_07945_v3 Cicer arietinum L.
Cc02_g38620 Coffea canephora
CDE04G1250 Ceratophyllum demersum
Cfa003866 Carpinus fangiana
Cfa003867 Carpinus fangiana
Cfa005667 Carpinus fangiana
Cfa007551 Carpinus fangiana
Cfa007552 Carpinus fangiana
Cfa012405 Carpinus fangiana
Ciclev10010508m.g Citrus clementina
Ciclev10023843m.g Citrus clementina
CiPaw.01G068200 Carya illinoinensis
CiPaw.02G035700 Carya illinoinensis
ClCG05G001200 Citrullus lanatus
COL.COLO4_12782 Corchorus olitorius
Cpa.g.sc11.66 Carica papaya
Cpa.g.sc11.68 Carica papaya
Cpa.g.sc11.69 Carica papaya
CsaV3_3G008590 Cucumis sativus L.
CSS0027600 Camellia sinensis var. sinensis
CSS0034761 Camellia sinensis var. sinensis
DCAR_005362 Daucus carota
DCAR_006950 Daucus carota
DCAR_025218 Daucus carota
DCAR_025219 Daucus carota
DCAR_025220 Daucus carota
Dinv32524 Davidia involucrata
Dinv43867 Davidia involucrata
Duzib138G0540 Durio zibethinus
ECA233G4379 Erigeron canadensis
ECA236G1734 Erigeron canadensis
ECA236G2695 Erigeron canadensis
ECA236G5025 Erigeron canadensis
ECA238G0673 Erigeron canadensis
EL10Ac1g00350 Beta vulgaris
EL10Ac1g00351 Beta vulgaris
Eucgr.D02327 Eucalyptus grandis
FAN01G2548 Fragaria x ananassa
FAN03G0166 Fragaria x ananassa
FAN03G1093 Fragaria x ananassa
FAN06G0946 Fragaria x ananassa
FAN06G1373 Fragaria x ananassa
FAN06G1939 Fragaria x ananassa
FAN06G3516 Fragaria x ananassa
FAN06G4194 Fragaria x ananassa
FAN06G4990 Fragaria x ananassa
FAN10G0303 Fragaria x ananassa
FAN10G1427 Fragaria x ananassa
FAN10G3091 Fragaria x ananassa
FAN10G3267 Fragaria x ananassa
FvH4_7g15440 Fragaria vesca
FvH4_7g15460 Fragaria vesca
FvH4_7g15470 Fragaria vesca
Glyma.09G254302 Glycine max
Glyma.16G031300 Glycine max
Glyma.18G238700 Glycine max
Gohir.A07G140200 Gossypium hirsutum
Gohir.A08G127951 Gossypium hirsutum
Gohir.A11G092600 Gossypium hirsutum
Gohir.D07G145400 Gossypium hirsutum
Gohir.D11G097400 Gossypium hirsutum
Gorai.001G157400 Gossypium raimondii
Gorai.007G103700 Gossypium raimondii
GSVIVG01026974001 Vitis vinifera
GSVIVG01026975001 Vitis vinifera
GSVIVG01026976001 Vitis vinifera
HanXRQChr04g0120831 Helianthus annuus
HanXRQChr16g0523701 Helianthus annuus
HanXRQChr17g0562311 Helianthus annuus
Haze_15569 Corylus avellana
Hma1.2p1_0335F.1_g128850 Hydrangea macrophylla
Hma1.2p1_0623F.1_g191120 Hydrangea macrophylla
HPP92_005479 Vanilla planifolia
Hund27240 Selenicereus undatus
Lalb_Chr08g0233291 Lupinus albus
Lalb_Chr10g0096611 Lupinus albus
Lalb_Chr11g0073301 Lupinus albus
Lalb_Chr23g0275981 Lupinus albus
Lj1g0025696 Lotus japonicus
Lj3g0021395 Lotus japonicus
Lj7A506T71 Lonicera japonica
Lj9C589T9 Lonicera japonica
Lj9C590T13 Lonicera japonica
Lsat_1_v5_gn_4_35200 Lactuca sativa
Lsat_1_v5_gn_7_2601 Lactuca sativa
Lsat_1_v5_gn_7_2621 Lactuca sativa
Lsat_1_v5_gn_7_2641 Lactuca sativa
Manes.01G252100 Manihot esculenta
Manes.05G028700 Manihot esculenta
Mapoly0065s0058 Marchantia polymorpha
MBI06_g33540_MAGBIO Magnolia biondii
MD01G1071800 Malus domestica
MD01G1071900 Malus domestica
MD01G1072000 Malus domestica
MD07G1130800 Malus domestica
MD07G1130900 Malus domestica
Medtr7g079180 Medicago truncatula
Medtr8g028480 Medicago truncatula
MELO3C006079.2 Cucumis melo
Migut.B01802 Erythranthe guttata
Migut.H01873 Erythranthe guttata
Migut.M01824 Erythranthe guttata
MSTRG.12260 Avicennia marina
MSTRG.14404 Avicennia marina
MSTRG.20864 Avicennia marina
Nitab4.5_0000915g0090 Nicotiana tabacum
Nitab4.5_0000915g0100 Nicotiana tabacum
Nitab4.5_0003501g0080 Nicotiana tabacum
Nitab4.5_0004481g0030 Nicotiana tabacum
Nitab4.5_0010695g0040 Nicotiana tabacum
Nn1g01694 Nelumbo nucifera
Nn6g33248 Nelumbo nucifera
Oeu004908.1 Olea europaea
Oeu054357.1 Olea europaea
Oeu054358.1 Olea europaea
Os01g0225600 Oryza sativa ssp. japonica
Os01g0624400 Oryza sativa ssp. japonica
Os05g0584200 Oryza sativa ssp. japonica
Peaxi162Scf00020g00154 Petunia axillaris
Peaxi162Scf00585g00514 Petunia axillaris
PGR031G3681 Punica granatum
PGSC0003DMG400000066 Solanum tuberosum
PGSC0003DMG400000067 Solanum tuberosum
PGSC0003DMG400019407 Solanum tuberosum
Phvul.008G057900 Phaseolus vulgaris
Phvul.010G104800 Phaseolus vulgaris
Potri.002G165000 Populus trichocarpa
Potri.014G090800 Populus trichocarpa
Pp3c22_13190 Physcomitrium patens
Prupe.2G178000 Prunus persica
Prupe.2G178100 Prunus persica
Prupe.2G178200 Prunus persica
Prupe.2G178300 Prunus persica
Psat3g105280 Pisum sativum
Psat4g157760 Pisum sativum
Psat4g157880 Pisum sativum
PSO135G0119 Papaver somniferum
PSO151G0033 Papaver somniferum
PSO266G0008 Papaver somniferum
PSO304G0001 Papaver somniferum
PSO304G0013 Papaver somniferum
PSO304G0017 Papaver somniferum
PSO304G0018 Papaver somniferum
PSO304G0019 Papaver somniferum
PSO384G0080 Papaver somniferum
PSO384G1150 Papaver somniferum
PSO384G1265 Papaver somniferum
PSO384G2830 Papaver somniferum
PSO384G3115 Papaver somniferum
PSO384G4681 Papaver somniferum
PSO724G1354 Papaver somniferum
QL04p055662 Quercus lobata
QL04p055693 Quercus lobata
RcHm_v2.0_Chr1g0357761 Rosa chinensis
RcHm_v2.0_Chr1g0357771 Rosa chinensis
RcHm_v2.0_Chr1g0357781 Rosa chinensis
Rhsim01G0166300 Rhododendron simsii
Rhsim01G0166700 Rhododendron simsii
Rhsim05G0174500 Rhododendron simsii
Rhsim07G0009700 Rhododendron simsii
Sabra02G0146500 Salix brachista
Sabra14G0065800 Salix brachista
SalBow3G0488 Salvia bowleyana
SalBow7G0650 Salvia bowleyana
Sc01g0003190 Simmondsia chinensis
Sed0002172 Sechium edule
Sed0017883 Sechium edule
SEGI_07775 Sequoiadendron giganteum
SEGI_14385 Sequoiadendron giganteum
SEGI_24564 Sequoiadendron giganteum
SGA_v2.0_scaffold150G36630 Striga asiatica
SGA_v2.0_scaffold266G46145 Striga asiatica
SGA_v2.0_scaffold9G05008 Striga asiatica
SMO334G0106 Selaginella moellendorffii
Solyc01g095140.4 Solanum lycopersicum
Solyc01g095150.3 Solanum lycopersicum
Solyc10g011900.3 Solanum lycopersicum
Sopen01g038930 Solanum pennellii
Sopen01g038940 Solanum pennellii
Sopen10g005690 Solanum pennellii
Sp1g00840 Schrenkiella parvula
Sp4g28200 Schrenkiella parvula
TAR374G0414 Trochodendron aralioides
TAR374G1706 Trochodendron aralioides
TAR629G1937 Trochodendron aralioides
THA.LOC104801390 Tarenaya hassleriana
THA.LOC104816436 Tarenaya hassleriana
THA.LOC104817042 Tarenaya hassleriana
THA.LOC104817321 Tarenaya hassleriana
THA.LOC104827606 Tarenaya hassleriana
Thecc.01G352000 Theobroma cacao
Thhalv10001664m.g Eutrema salsugineum
Thhalv10009011m.g Eutrema salsugineum
TPR.G17658 Trifolium pratense
TPR.G28290 Trifolium pratense
TPR.G29570 Trifolium pratense
TWI14G0583 Tripterygium wilfordii
unitig_26.g9972 Utricularia gibba
unitig_899.g15530 Utricularia gibba
vmacro13223 Vaccinium macrocarpon
vmacro20891 Vaccinium macrocarpon
vmacro20895 Vaccinium macrocarpon
vmacro20896 Vaccinium macrocarpon
VMungo0331G0253 Vigna mungo
VMungo1383G2977 Vigna mungo
Zm00001eb159430 Zea mays
Zm00001eb342130 Zea mays
Zm00001eb344820 Zea mays
Zm00001eb358640 Zea mays

User provided reference genes

Program Settings