Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p01100 Brassica napus
A06p16170 Brassica napus
Aa31LG3G15580 Aethionema arabicum
Aa31LG7G4460 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4818 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2380 Anthoceros agrestis
Actinidia14672 Actinidia chinensis
Actinidia15737 Actinidia chinensis
Actinidia29750 Actinidia chinensis
Ah.00g000170 Amaranthus hybridus
Ah.10g035040 Amaranthus hybridus
AL1G32720 Arabidopsis lyrata
AL6G22300 Arabidopsis lyrata
Aqoxy6G02066 Aquilegia oxysepala
Aqoxy7G01488 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9C8SD4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AAFE4G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KPU76V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QLSU9X Arachis hypogaea
AT1G19990 Arabidopsis thaliana
AT5G11600 Arabidopsis thaliana
ATR0705G067 Amborella trichopoda
ATR0810G022 Amborella trichopoda
Atru.chr13.289 Acer truncatum
Atru.chr7.2093 Acer truncatum
Atru.chr7.2107 Acer truncatum
AUR62009287 Chenopodium quinoa
AUR62033902 Chenopodium quinoa
AUR62039693 Chenopodium quinoa
AUR62041905 Chenopodium quinoa
BcaB03g14343 Brassica carinata
BcaB03g14418 Brassica carinata
BcaB07g32019 Brassica carinata
BcaB07g32994 Brassica carinata
BcaC03g13382 Brassica carinata
BcaC05g25897 Brassica carinata
BcaC05g25902 Brassica carinata
BcaNung01938 Brassica carinata
BcaNung01939 Brassica carinata
BolC2t06476H Brassica oleracea
BolC5t30563H Brassica oleracea
BolC7t42877H Brassica oleracea
BraA02t05090Z Brassica rapa
BraA06t24722Z Brassica rapa
C02p05280 Brassica napus
C05p18520 Brassica napus
CAN.G309.76 Capsicum annuum
CAN.G311.31 Capsicum annuum
CANSAT25G1183 Cannabis sativa
CANSAT25G2815 Cannabis sativa
CARHR201620 Cardamine hirsuta
Carub.0001s1952 Capsella rubella
Carub.0006s1008 Capsella rubella
Ca_00834_v3 Cicer arietinum L.
Ca_12750_v3 Cicer arietinum L.
Ca_15596_v3 Cicer arietinum L.
CBR_g36457 Chara braunii
Cc08_g09510 Coffea canephora
Cc10_g01660 Coffea canephora
CDE05G1392 Ceratophyllum demersum
CDE05G2707 Ceratophyllum demersum
CDE08G0456 Ceratophyllum demersum
Cfa013362 Carpinus fangiana
Cfa013953 Carpinus fangiana
Ciclev10002221m.g Citrus clementina
Ciclev10009557m.g Citrus clementina
CiPaw.07G149500 Carya illinoinensis
CiPaw.07G204600 Carya illinoinensis
CiPaw.08G025400 Carya illinoinensis
ClCG05G018240 Citrullus lanatus
ClCG08G012260 Citrullus lanatus
COL.COLO4_26144 Corchorus olitorius
Cpa.g.sc26.47 Carica papaya
Cpa.g.sc522.2 Carica papaya
Cre08.g375850 Chlamydomonas reinhardtii
CsaV3_2G030890 Cucumis sativus L.
CsaV3_3G045900 Cucumis sativus L.
CSS0006160 Camellia sinensis var. sinensis
CSS0007775 Camellia sinensis var. sinensis
CSS0041890 Camellia sinensis var. sinensis
DCAR_000750 Daucus carota
DCAR_000751 Daucus carota
DCAR_009485 Daucus carota
DCAR_013868 Daucus carota
Dinv14262 Davidia involucrata
Dinv27898 Davidia involucrata
Dinv39520 Davidia involucrata
Duzib041G0007 Durio zibethinus
Duzib150G0654 Durio zibethinus
Duzib168G1844 Durio zibethinus
ECA233G6177 Erigeron canadensis
EL10Ac1g02193 Beta vulgaris
EL10Ac2g04023 Beta vulgaris
Eucgr.C02926 Eucalyptus grandis
Eucgr.F01662 Eucalyptus grandis
FAN15G0110 Fragaria x ananassa
FAN15G3002 Fragaria x ananassa
FAN20G1634 Fragaria x ananassa
FAN20G1950 Fragaria x ananassa
FAN27G0094 Fragaria x ananassa
FAN27G1063 Fragaria x ananassa
FvH4_2g35630 Fragaria vesca
FvH4_2g38430 Fragaria vesca
Glyma.04G024100 Glycine max
Glyma.04G083900 Glycine max
Glyma.06G024300 Glycine max
Glyma.06G085600 Glycine max
Glyma.14G146200 Glycine max
Glyma.17G194200 Glycine max
Gohir.A04G050900 Gossypium hirsutum
Gohir.A05G256900 Gossypium hirsutum
Gohir.A05G339800 Gossypium hirsutum
Gohir.A06G093000 Gossypium hirsutum
Gohir.A08G249984 Gossypium hirsutum
Gohir.D05G258400 Gossypium hirsutum
Gohir.D06G092700 Gossypium hirsutum
Gohir.D08G271500 Gossypium hirsutum
Gorai.004G289900 Gossypium raimondii
Gorai.009G269900 Gossypium raimondii
Gorai.010G107100 Gossypium raimondii
GSVIVG01009909001 Vitis vinifera
GSVIVG01035629001 Vitis vinifera
HanXRQChr08g0234401 Helianthus annuus
HanXRQChr13g0386661 Helianthus annuus
HanXRQChr16g0512091 Helianthus annuus
Haze_21883 Corylus avellana
Haze_22636 Corylus avellana
Hma1.2p1_0023F.1_g015470 Hydrangea macrophylla
Hma1.2p1_1423F.1_g282560 Hydrangea macrophylla
HPP92_003532 Vanilla planifolia
HPP92_024168 Vanilla planifolia
Hund05188 Selenicereus undatus
Hund19519 Selenicereus undatus
Lalb_Chr08g0243091 Lupinus albus
Lalb_Chr11g0061911 Lupinus albus
Lalb_Chr23g0269601 Lupinus albus
Lj1g0013926 Lotus japonicus
Lj1g0018167 Lotus japonicus
Lj1g0023228 Lotus japonicus
Lj4A24T49 Lonicera japonica
Lj7C702T4 Lonicera japonica
Lj8A576T57 Lonicera japonica
Lj8A586T41 Lonicera japonica
Lj8A586T42 Lonicera japonica
Lsat_1_v5_gn_5_33620 Lactuca sativa
Lsat_1_v5_gn_8_30600 Lactuca sativa
Manes.16G075900 Manihot esculenta
Manes.18G013400 Manihot esculenta
Mapoly0016s0021 Marchantia polymorpha
MBI01_g24461_MAGBIO Magnolia biondii
MBI04_g27061_MAGBIO Magnolia biondii
MBI09_g34417_MAGBIO Magnolia biondii
MBI09_g44561_MAGBIO Magnolia biondii
MCO05G389 Micromonas commoda
MD08G1013000 Malus domestica
MD08G1114400 Malus domestica
MD15G1093900 Malus domestica
Medtr1g006605 Medicago truncatula
Medtr3g110202 Medicago truncatula
Medtr3g113940 Medicago truncatula
MELO3C003748.2 Cucumis melo
MELO3C011144.2 Cucumis melo
Migut.A00207 Erythranthe guttata
Migut.C00839 Erythranthe guttata
MSTRG.22341 Avicennia marina
MSTRG.25908 Avicennia marina
Nitab4.5_0000664g0240 Nicotiana tabacum
Nitab4.5_0001567g0160 Nicotiana tabacum
Nitab4.5_0009651g0010 Nicotiana tabacum
Nn2g11627 Nelumbo nucifera
Nn3g18172 Nelumbo nucifera
Nn5g30139 Nelumbo nucifera
Oeu012198.1 Olea europaea
Oeu014181.1 Olea europaea
Oeu031547.2 Olea europaea
Oeu061956.1 Olea europaea
Os03g0249900 Oryza sativa ssp. japonica
Os05g0596200 Oryza sativa ssp. japonica
Peaxi162Scf00438g00820 Petunia axillaris
Peaxi162Scf01204g00123 Petunia axillaris
PGR031G0934 Punica granatum
PGR044G0927 Punica granatum
PGR083G0050 Punica granatum
PGSC0003DMG400009865 Solanum tuberosum
PGSC0003DMG400018583 Solanum tuberosum
Phvul.002G267100 Phaseolus vulgaris
Phvul.009G017100 Phaseolus vulgaris
Phvul.009G109500 Phaseolus vulgaris
Potri.005G239600 Populus trichocarpa
Potri.006G238800 Populus trichocarpa
Potri.018G043800 Populus trichocarpa
Pp3c13_2370 Physcomitrium patens
Pp3c3_5540 Physcomitrium patens
Prupe.1G365000 Prunus persica
Prupe.1G448700 Prunus persica
Psat0s501g0080 Pisum sativum
Psat5g021640 Pisum sativum
Psat6g037800 Pisum sativum
PSO170G0842 Papaver somniferum
PSO210G0675 Papaver somniferum
PSO210G3671 Papaver somniferum
PSO541G0024 Papaver somniferum
PSO566G0111 Papaver somniferum
PSO675G5916 Papaver somniferum
PSO700G0022 Papaver somniferum
PSO782G1850 Papaver somniferum
QL02p011646 Quercus lobata
QL12p041571 Quercus lobata
RcHm_v2.0_Chr6g0302881 Rosa chinensis
RcHm_v2.0_Chr6g0306181 Rosa chinensis
Rhsim07G0247600 Rhododendron simsii
RhsimUnG0066100 Rhododendron simsii
Sabra02G0018200 Salix brachista
Sabra05G0185200 Salix brachista
Sabra06G0186800 Salix brachista
Sabra18G0043900 Salix brachista
SalBow1G0396 Salvia bowleyana
SalBow1G8378 Salvia bowleyana
SalBow4G0694 Salvia bowleyana
SalBow4G2117 Salvia bowleyana
SalBow7G1946 Salvia bowleyana
Sc09g0009270 Simmondsia chinensis
Sc15g0004970 Simmondsia chinensis
Sed0006848 Sechium edule
Sed0017645 Sechium edule
Sed0023683 Sechium edule
SEGI_04098 Sequoiadendron giganteum
SGA_v2.0_scaffold103G29960 Striga asiatica
SGA_v2.0_scaffold390G50605 Striga asiatica
SHI28590 Sapria himalayana
SMO146G0282 Selaginella moellendorffii
SMO160G0010 Selaginella moellendorffii
Solyc04g081470.4 Solanum lycopersicum
Solyc11g071220.2 Solanum lycopersicum
Sopen04g035080 Solanum pennellii
Sopen11g028900 Solanum pennellii
Sp1g17780 Schrenkiella parvula
Sp6g32015 Schrenkiella parvula
TAR376G0239 Trochodendron aralioides
TAR383G0059 Trochodendron aralioides
TAR626G0604 Trochodendron aralioides
THA.LOC104799194 Tarenaya hassleriana
THA.LOC104809499 Tarenaya hassleriana
Thecc.08G044800 Theobroma cacao
Thecc.09G044700 Theobroma cacao
Thhalv10008450m.g Eutrema salsugineum
Thhalv10014651m.g Eutrema salsugineum
TPR.G1349 Trifolium pratense
TPR.G24490 Trifolium pratense
TPR.G24532 Trifolium pratense
TPR.G34550 Trifolium pratense
TWI34G1326 Tripterygium wilfordii
TWI56G0087 Tripterygium wilfordii
TWI63G0866 Tripterygium wilfordii
unitig_0.g2573 Utricularia gibba
unitig_899.g15547 Utricularia gibba
vmacro05369 Vaccinium macrocarpon
vmacro22891 Vaccinium macrocarpon
VMungo0251G1540 Vigna mungo
VMungo1309G0623 Vigna mungo
Zm00001eb345570 Zea mays
Zm00001eb398550 Zea mays
Zm00001eb438780 Zea mays

User provided reference genes

Program Settings