Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p15280 Brassica napus
Aa31LG3G2620 Aethionema arabicum
Actinidia08626 Actinidia chinensis
Actinidia08627 Actinidia chinensis
Actinidia22714 Actinidia chinensis
Actinidia27338 Actinidia chinensis
Actinidia34198 Actinidia chinensis
Ah.07g206030 Amaranthus hybridus
AL8G27880 Arabidopsis lyrata
Aqoxy7G01617 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.84BZB4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PZ4M2K Arachis hypogaea
AT5G53220 Arabidopsis thaliana
ATR1093G048 Amborella trichopoda
Atru.chr1.259 Acer truncatum
Atru.chr1.260 Acer truncatum
Atru.chr1.263 Acer truncatum
Atru.chr9.2046 Acer truncatum
Atru.chr9.2048 Acer truncatum
AUR62006155 Chenopodium quinoa
AUR62019335 Chenopodium quinoa
AUR62019803 Chenopodium quinoa
AUR62019805 Chenopodium quinoa
AUR62041778 Chenopodium quinoa
BcaB01g04236 Brassica carinata
BcaC01g06231 Brassica carinata
BolC3t14193H Brassica oleracea
BraA03t10821Z Brassica rapa
C03p17860 Brassica napus
CAN.G1505.1 Capsicum annuum
CAN.G532.93 Capsicum annuum
CAN.G792.48 Capsicum annuum
CAN.G792.51 Capsicum annuum
CAN.G792.54 Capsicum annuum
CAN.G792.56 Capsicum annuum
CAN.G792.61 Capsicum annuum
CAN.G792.63 Capsicum annuum
CANSAT21G0945 Cannabis sativa
CARHR266290 Cardamine hirsuta
Carub.0008s1342 Capsella rubella
Cc02_g01900 Coffea canephora
Cc08_g15750 Coffea canephora
CDE02G2134 Ceratophyllum demersum
Cfa012844 Carpinus fangiana
Cfa016360 Carpinus fangiana
Cfa016361 Carpinus fangiana
Ciclev10004699m.g Citrus clementina
Ciclev10019635m.g Citrus clementina
CiPaw.05G257900 Carya illinoinensis
ClCG05G008700 Citrullus lanatus
ClCG07G014870 Citrullus lanatus
COL.COLO4_35658 Corchorus olitorius
Cpa.g.sc3.49 Carica papaya
CsaV3_3G021930 Cucumis sativus L.
CsaV3_4G006400 Cucumis sativus L.
DCAR_005024 Daucus carota
Dinv28338 Davidia involucrata
Dinv37552 Davidia involucrata
Dinv38860 Davidia involucrata
Duzib068G1380 Durio zibethinus
Duzib205G0163 Durio zibethinus
ECA232G0187 Erigeron canadensis
ECA246G0735 Erigeron canadensis
ECA246G4061 Erigeron canadensis
EL10Ac3g05348 Beta vulgaris
EL10Ac4g09958 Beta vulgaris
EL10Ac5g12881 Beta vulgaris
Eucgr.E00841 Eucalyptus grandis
Eucgr.E00842 Eucalyptus grandis
Eucgr.K00328 Eucalyptus grandis
FAN01G3133 Fragaria x ananassa
FAN03G2222 Fragaria x ananassa
FAN06G1680 Fragaria x ananassa
FAN06G3312 Fragaria x ananassa
FAN10G3352 Fragaria x ananassa
FAN10G3419 Fragaria x ananassa
FvH4_7g31000 Fragaria vesca
Glyma.13G040000 Glycine max
Gohir.A12G251900 Gossypium hirsutum
Gohir.D05G082150 Gossypium hirsutum
Gohir.D12G252800 Gossypium hirsutum
Gohir.D12G253600 Gossypium hirsutum
Gorai.008G270900 Gossypium raimondii
GSVIVG01028743001 Vitis vinifera
HanXRQChr09g0253061 Helianthus annuus
HanXRQChr09g0253071 Helianthus annuus
HanXRQChr09g0253081 Helianthus annuus
HanXRQChr09g0253091 Helianthus annuus
HanXRQChr17g0535091 Helianthus annuus
Haze_00109 Corylus avellana
Haze_00110 Corylus avellana
Haze_08671 Corylus avellana
Hma1.2p1_0952F.1_g240875 Hydrangea macrophylla
Hma1.2p1_0952F.1_g240890 Hydrangea macrophylla
Hund04830 Selenicereus undatus
Hund11407 Selenicereus undatus
Lalb_Chr08g0240591 Lupinus albus
Lalb_Chr08g0240601 Lupinus albus
Lj1A1012T85 Lonicera japonica
Lj1g0015870 Lotus japonicus
Lj1g0020480 Lotus japonicus
Lj1P1012T81 Lonicera japonica
Lsat_1_v5_gn_9_57361 Lactuca sativa
Lsat_1_v5_gn_9_57381 Lactuca sativa
Lsat_1_v5_gn_9_57421 Lactuca sativa
Manes.01G045600 Manihot esculenta
Manes.06G157000 Manihot esculenta
MBI06_g22400_MAGBIO Magnolia biondii
MD01G1215100 Malus domestica
MD07G1284800 Malus domestica
Medtr0432s0020 Medicago truncatula
Medtr1g028620 Medicago truncatula
Medtr1g028700 Medicago truncatula
Medtr1g028850 Medicago truncatula
Medtr1g028880 Medicago truncatula
MELO3C014743.2 Cucumis melo
MELO3C016310.2 Cucumis melo
MELO3C016311.2 Cucumis melo
MELO3C026935.2 Cucumis melo
MELO3C029814.2 Cucumis melo
MELO3C030504.2 Cucumis melo
MELO3C031179.2 Cucumis melo
MELO3C031719.2 Cucumis melo
MELO3C032419.2 Cucumis melo
MELO3C032525.2 Cucumis melo
MELO3C033094.2 Cucumis melo
MELO3C034218.2 Cucumis melo
MELO3C034641.2 Cucumis melo
MELO3C035050.2 Cucumis melo
Migut.A00681 Erythranthe guttata
Migut.A00682 Erythranthe guttata
Migut.A00683 Erythranthe guttata
Migut.E01018 Erythranthe guttata
Migut.E01233 Erythranthe guttata
Migut.F00244 Erythranthe guttata
Migut.J00941 Erythranthe guttata
Migut.O00408 Erythranthe guttata
MSTRG.1820 Avicennia marina
MSTRG.8680 Avicennia marina
Nitab4.5_0000223g0150 Nicotiana tabacum
Nitab4.5_0000473g0110 Nicotiana tabacum
Nitab4.5_0002589g0030 Nicotiana tabacum
Nitab4.5_0004161g0010 Nicotiana tabacum
Nn1g01811 Nelumbo nucifera
Nn3g19082 Nelumbo nucifera
Oeu010114.1 Olea europaea
Oeu017335.1 Olea europaea
Oeu046819.1 Olea europaea
Oeu060971.1 Olea europaea
Os01g0221300 Oryza sativa ssp. japonica
Os01g0656900 Oryza sativa ssp. japonica
Peaxi162Scf00074g01214 Petunia axillaris
Peaxi162Scf00102g01740 Petunia axillaris
Peaxi162Scf00904g00320 Petunia axillaris
PGR142G0759 Punica granatum
PGSC0003DMG400001678 Solanum tuberosum
PGSC0003DMG400009100 Solanum tuberosum
PGSC0003DMG400012162 Solanum tuberosum
PGSC0003DMG402019602 Solanum tuberosum
Phvul.009G137300 Phaseolus vulgaris
Potri.014G039200 Populus trichocarpa
Potri.015G022500 Populus trichocarpa
Prupe.2G307000 Prunus persica
Psat1g005480 Pisum sativum
PSO017G1735 Papaver somniferum
PSO017G4509 Papaver somniferum
PSO017G5210 Papaver somniferum
PSO017G6345 Papaver somniferum
PSO063G1767 Papaver somniferum
PSO063G5339 Papaver somniferum
PSO063G5830 Papaver somniferum
PSO063G6250 Papaver somniferum
PSO063G6519 Papaver somniferum
PSO170G2676 Papaver somniferum
PSO170G4022 Papaver somniferum
PSO173G0034 Papaver somniferum
PSO210G0379 Papaver somniferum
PSO210G0413 Papaver somniferum
PSO210G3763 Papaver somniferum
PSO339G0177 Papaver somniferum
PSO339G1888 Papaver somniferum
PSO339G6335 Papaver somniferum
PSO421G0489 Papaver somniferum
PSO478G0802 Papaver somniferum
PSO478G1345 Papaver somniferum
PSO591G0115 Papaver somniferum
PSO591G0137 Papaver somniferum
PSO675G0694 Papaver somniferum
PSO675G0866 Papaver somniferum
PSO675G1890 Papaver somniferum
PSO675G1901 Papaver somniferum
PSO675G2360 Papaver somniferum
PSO675G3203 Papaver somniferum
PSO675G3980 Papaver somniferum
PSO675G4244 Papaver somniferum
PSO675G4855 Papaver somniferum
PSO675G5053 Papaver somniferum
PSO675G5115 Papaver somniferum
PSO675G6647 Papaver somniferum
PSO675G6667 Papaver somniferum
PSO675G8236 Papaver somniferum
PSO675G8616 Papaver somniferum
PSO675G9054 Papaver somniferum
PSO732G0203 Papaver somniferum
PSO732G0349 Papaver somniferum
PSO732G0573 Papaver somniferum
PSO732G0629 Papaver somniferum
PSO732G0710 Papaver somniferum
PSO732G0732 Papaver somniferum
PSO764G0213 Papaver somniferum
PSO764G0332 Papaver somniferum
PSO782G5749 Papaver somniferum
PSO832G0171 Papaver somniferum
PSO832G1019 Papaver somniferum
PSO832G1179 Papaver somniferum
PSO832G1885 Papaver somniferum
PSO832G3317 Papaver somniferum
PSO832G4482 Papaver somniferum
QL02p031474 Quercus lobata
QL08p022449 Quercus lobata
QL09p010995 Quercus lobata
RcHm_v2.0_Chr1g0380081 Rosa chinensis
Rhsim03G0198700 Rhododendron simsii
Rhsim07G0084100 Rhododendron simsii
Rhsim07G0084200 Rhododendron simsii
Rhsim07G0084300 Rhododendron simsii
Sabra01G0070500 Salix brachista
Sabra14G0028500 Salix brachista
Sabra15G0016800 Salix brachista
SalBow4G3348 Salvia bowleyana
Sc01g0004580 Simmondsia chinensis
Sc01g0004940 Simmondsia chinensis
Sc10g0005390 Simmondsia chinensis
Sc18g0004840 Simmondsia chinensis
Sc20g0002670 Simmondsia chinensis
Sed0010133 Sechium edule
Sed0013734 Sechium edule
Sed0015947 Sechium edule
Sed0017933 Sechium edule
Sed0024155 Sechium edule
SGA_v2.0_scaffold10G05321 Striga asiatica
SGA_v2.0_scaffold111G31456 Striga asiatica
SGA_v2.0_scaffold144G35843 Striga asiatica
SGA_v2.0_scaffold144G35846 Striga asiatica
SGA_v2.0_scaffold192G40581 Striga asiatica
SGA_v2.0_scaffold97G29144 Striga asiatica
SHI07011 Sapria himalayana
Solyc03g007420.3 Solanum lycopersicum
Solyc08g082000.4 Solanum lycopersicum
Sopen03g003380 Solanum pennellii
Sopen08g030300 Solanum pennellii
Sp6g15400 Schrenkiella parvula
TAR375G0150 Trochodendron aralioides
TAR376G0941 Trochodendron aralioides
Thecc.03G192600 Theobroma cacao
Thhalv10013960m.g Eutrema salsugineum
TPR.G33314 Trifolium pratense
TWI14G1284 Tripterygium wilfordii
vmacro06576 Vaccinium macrocarpon
vmacro13915 Vaccinium macrocarpon
vmacro13916 Vaccinium macrocarpon
VMungo1309G2151 Vigna mungo
Zm00001eb119710 Zea mays
Zm00001eb157960 Zea mays
Zm00001eb220430 Zea mays
Zm00001eb270620 Zea mays

User provided reference genes

Program Settings