Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p36490 Brassica napus
A09p32710 Brassica napus
Aa31LG9G8970 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3049 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.205 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.213 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_353.1 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1919 Anthoceros agrestis
Actinidia15970 Actinidia chinensis
Actinidia19236 Actinidia chinensis
Actinidia23296 Actinidia chinensis
Ah.02g124770 Amaranthus hybridus
Ah.02g125140 Amaranthus hybridus
Ah.02g127430 Amaranthus hybridus
Ah.03g141660 Amaranthus hybridus
Ah.03g146170 Amaranthus hybridus
Ah.09g225410 Amaranthus hybridus
Ah.09g225520 Amaranthus hybridus
Ah.13g066700 Amaranthus hybridus
AL1G47970 Arabidopsis lyrata
AL1G47980 Arabidopsis lyrata
AL1G47990 Arabidopsis lyrata
AL1G48010 Arabidopsis lyrata
AL1G48070 Arabidopsis lyrata
AL1G48080 Arabidopsis lyrata
AL3G46500 Arabidopsis lyrata
AL4G19020 Arabidopsis lyrata
Aqoxy2G04050 Aquilegia oxysepala
Aqoxy2G04051 Aquilegia oxysepala
Aqoxy6G02406 Aquilegia oxysepala
AT1G33590 Arabidopsis thaliana
AT1G33600 Arabidopsis thaliana
AT1G33610 Arabidopsis thaliana
AT1G33612 Arabidopsis thaliana
AT1G33670 Arabidopsis thaliana
AT2G26380 Arabidopsis thaliana
ATR0099G046 Amborella trichopoda
ATR0661G193 Amborella trichopoda
Atru.chr1.269 Acer truncatum
Atru.chr3.757 Acer truncatum
AUR62002982 Chenopodium quinoa
AUR62003299 Chenopodium quinoa
AUR62007788 Chenopodium quinoa
AUR62007789 Chenopodium quinoa
AUR62007790 Chenopodium quinoa
AUR62027161 Chenopodium quinoa
AUR62027162 Chenopodium quinoa
AUR62027163 Chenopodium quinoa
AUR62038925 Chenopodium quinoa
AUR62038929 Chenopodium quinoa
AUR62039001 Chenopodium quinoa
AUR62044398 Chenopodium quinoa
BcaB01g01462 Brassica carinata
BcaB03g13692 Brassica carinata
BcaB05g24595 Brassica carinata
BcaB07g32995 Brassica carinata
BcaC05g27800 Brassica carinata
BcaC06g31917 Brassica carinata
BcaC08g43848 Brassica carinata
BolC5t32528H Brassica oleracea
BolC6t36382H Brassica oleracea
BolC6t39384H Brassica oleracea
BolC6t39467H Brassica oleracea
BraA05t21305Z Brassica rapa
BraA07t28654Z Brassica rapa
BraA07t31220Z Brassica rapa
BraA09t38069Z Brassica rapa
BraA09t38811Z Brassica rapa
C05p37970 Brassica napus
C06p12310 Brassica napus
C06p40480 Brassica napus
C06p43950 Brassica napus
CAN.G358.8 Capsicum annuum
CAN.G625.35 Capsicum annuum
CANSAT78G1516 Cannabis sativa
CARHR033050 Cardamine hirsuta
CARHR033060 Cardamine hirsuta
CARHR033070 Cardamine hirsuta
CARHR033080 Cardamine hirsuta
CARHR033100 Cardamine hirsuta
Carub.0001s3118 Capsella rubella
Carub.0001s3119 Capsella rubella
Carub.0001s3175 Capsella rubella
Carub.0001s3176 Capsella rubella
Carub.0001s3177 Capsella rubella
Carub.0001s3181 Capsella rubella
Carub.0003s2745 Capsella rubella
Carub.0003s2751 Capsella rubella
Carub.0003s2752 Capsella rubella
Ca_14116_v3 Cicer arietinum L.
Cc07_g10340 Coffea canephora
Cc10_g16350 Coffea canephora
Cfa006934 Carpinus fangiana
Cfa008069 Carpinus fangiana
Cfa008070 Carpinus fangiana
Ciclev10019952m.g Citrus clementina
CiPaw.03G013800 Carya illinoinensis
CiPaw.07G055300 Carya illinoinensis
ClCG01G020070 Citrullus lanatus
ClCG11G008390 Citrullus lanatus
COL.COLO4_21972 Corchorus olitorius
COL.COLO4_30249 Corchorus olitorius
Cpa.g.sc21.89 Carica papaya
Cpa.g.sc6.205 Carica papaya
CsaV3_2G033250 Cucumis sativus L.
CsaV3_6G046840 Cucumis sativus L.
CSS0005183 Camellia sinensis var. sinensis
CSS0019475 Camellia sinensis var. sinensis
DCAR_015978 Daucus carota
DCAR_021489 Daucus carota
Dinv40050 Davidia involucrata
Duzib147G0685 Durio zibethinus
Duzib177G0070 Durio zibethinus
EL10Ac6g14594 Beta vulgaris
EL10Ac6g15676 Beta vulgaris
EL10As8g23862 Beta vulgaris
Eucgr.F04074 Eucalyptus grandis
Eucgr.I02373 Eucalyptus grandis
FAN06G0734 Fragaria x ananassa
FAN06G1483 Fragaria x ananassa
FAN20G3138 Fragaria x ananassa
FAN24G2062 Fragaria x ananassa
FAN26G1006 Fragaria x ananassa
FAN27G0614 Fragaria x ananassa
FAN28G1436 Fragaria x ananassa
FvH4_1g12240 Fragaria vesca
FvH4_2g00740 Fragaria vesca
Glyma.06G319640 Glycine max
Glyma.06G319700 Glycine max
Glyma.16G131500 Glycine max
Gohir.A08G230800 Gossypium hirsutum
Gohir.A12G061400 Gossypium hirsutum
Gohir.D08G251200 Gossypium hirsutum
Gohir.D12G061500 Gossypium hirsutum
Gorai.004G267900 Gossypium raimondii
Gorai.008G064700 Gossypium raimondii
GSVIVG01018835001 Vitis vinifera
GSVIVG01037229001 Vitis vinifera
HanXRQChr02g0057651 Helianthus annuus
HanXRQChr16g0530901 Helianthus annuus
HanXRQChr16g0530911 Helianthus annuus
Haze_03816 Corylus avellana
Hma1.2p1_0238F.1_g099660 Hydrangea macrophylla
Hma1.2p1_1771F.1_g301630 Hydrangea macrophylla
Hund14023 Selenicereus undatus
Lalb_Chr15g0079781 Lupinus albus
Lj3g0017306 Lotus japonicus
Lj7A419T37 Lonicera japonica
Lj7C419G2 Lonicera japonica
Lsat_1_v5_gn_1_52900 Lactuca sativa
Lsat_1_v5_gn_3_75380 Lactuca sativa
Manes.01G142200 Manihot esculenta
Manes.18G115700 Manihot esculenta
Mapoly0008s0264 Marchantia polymorpha
Mapoly0032s0028 Marchantia polymorpha
Mapoly0088s0036 Marchantia polymorpha
Mapoly0096s0031 Marchantia polymorpha
MBI11_g18033_MAGBIO Magnolia biondii
MD05G1002900 Malus domestica
MD15G1249900 Malus domestica
Medtr3g009050 Medicago truncatula
Medtr8g076360 Medicago truncatula
Medtr8g076378 Medicago truncatula
Medtr8g076380 Medicago truncatula
Medtr8g076410 Medicago truncatula
MELO3C007881.2 Cucumis melo
MELO3C008095.2 Cucumis melo
Migut.C01385 Erythranthe guttata
Migut.F00453 Erythranthe guttata
Migut.F00454 Erythranthe guttata
Migut.H02487 Erythranthe guttata
MSTRG.2503 Avicennia marina
Nitab4.5_0000213g0030 Nicotiana tabacum
Nitab4.5_0002266g0090 Nicotiana tabacum
Nitab4.5_0004086g0010 Nicotiana tabacum
Nn1g03278 Nelumbo nucifera
Nn5g29193 Nelumbo nucifera
Nn6g34382 Nelumbo nucifera
Oeu005148.1 Olea europaea
Oeu023580.1 Olea europaea
Peaxi162Scf00078g00078 Petunia axillaris
Peaxi162Scf00078g00710 Petunia axillaris
Peaxi162Scf00083g01719 Petunia axillaris
Peaxi162Scf00083g01720 Petunia axillaris
PGR083G1536 Punica granatum
PGSC0003DMG400003544 Solanum tuberosum
PGSC0003DMG400016908 Solanum tuberosum
Phvul.003G258800 Phaseolus vulgaris
Phvul.005G007100 Phaseolus vulgaris
Potri.005G117700 Populus trichocarpa
Potri.007G016700 Populus trichocarpa
Potri.013G098850 Populus trichocarpa
Potri.013G098900 Populus trichocarpa
Pp3c1_25110 Physcomitrium patens
Pp3c21_19160 Physcomitrium patens
Pp3c24_2580 Physcomitrium patens
Pp3c25_12800 Physcomitrium patens
Prupe.7G164400 Prunus persica
Prupe.8G006300 Prunus persica
Psat5g230720 Pisum sativum
PSO063G6131 Papaver somniferum
PSO135G0501 Papaver somniferum
PSO135G0758 Papaver somniferum
PSO384G1457 Papaver somniferum
PSO384G1529 Papaver somniferum
PSO384G1649 Papaver somniferum
PSO384G1990 Papaver somniferum
PSO384G2367 Papaver somniferum
PSO384G2660 Papaver somniferum
PSO384G4644 Papaver somniferum
PSO541G1422 Papaver somniferum
PSO541G3058 Papaver somniferum
PSO541G4115 Papaver somniferum
PSO541G4589 Papaver somniferum
PSO541G4650 Papaver somniferum
PSO675G6176 Papaver somniferum
PSO675G6841 Papaver somniferum
PSO675G9374 Papaver somniferum
QL09p001766 Quercus lobata
QL09p001786 Quercus lobata
RcHm_v2.0_Chr2g0100021 Rosa chinensis
RcHm_v2.0_Chr6g0251101 Rosa chinensis
Rhsim08G0036100 Rhododendron simsii
Rhsim12G0002600 Rhododendron simsii
Sabra05G0096800 Salix brachista
Sabra07G0013900 Salix brachista
Sabra13G0083500 Salix brachista
Sabra13G0083600 Salix brachista
Sabra13G0084800 Salix brachista
Sabra13G0084900 Salix brachista
SalBow8G3503 Salvia bowleyana
Sc07g0007330 Simmondsia chinensis
Sc19g0002890 Simmondsia chinensis
Sed0015966 Sechium edule
Sed0016929 Sechium edule
SEGI_22452 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32615 Striga asiatica
SGA_v2.0_scaffold2G01235 Striga asiatica
SGA_v2.0_scaffold2G01238 Striga asiatica
SMO115G0158 Selaginella moellendorffii
SMO166G0060 Selaginella moellendorffii
Solyc02g084600.4 Solanum lycopersicum
Solyc10g052880.1 Solanum lycopersicum
Sopen02g029270 Solanum pennellii
Sopen10g023690 Solanum pennellii
Sp1g29040 Schrenkiella parvula
Sp6g07180 Schrenkiella parvula
TAR362G0902 Trochodendron aralioides
TAR628G0632 Trochodendron aralioides
THA.LOC104815822 Tarenaya hassleriana
Thecc.01G024300 Theobroma cacao
Thecc.03G189200 Theobroma cacao
Thhalv10001853m.g Eutrema salsugineum
Thhalv10001857m.g Eutrema salsugineum
Thhalv10007504m.g Eutrema salsugineum
Thhalv10007598m.g Eutrema salsugineum
Thhalv10007627m.g Eutrema salsugineum
Thhalv10009576m.g Eutrema salsugineum
Thhalv10009786m.g Eutrema salsugineum
Thhalv10009975m.g Eutrema salsugineum
Thhalv10010003m.g Eutrema salsugineum
TPR.G28708 Trifolium pratense
TWI09G1571 Tripterygium wilfordii
TWI75G0918 Tripterygium wilfordii
vmacro22099 Vaccinium macrocarpon
VMungo0251G2871 Vigna mungo
VMungo1080G1397 Vigna mungo

User provided reference genes

Program Settings