Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p21340 Brassica napus
A06p17850 Brassica napus
A07p14930 Brassica napus
A07p27980 Brassica napus
A07p42970 Brassica napus
A08p28820 Brassica napus
Aa31LG4G7540 Aethionema arabicum
Aa31LG7G5730 Aethionema arabicum
Aa31LG9G14210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2142 Anthoceros agrestis
Actinidia02625 Actinidia chinensis
Actinidia28622 Actinidia chinensis
Ah.02g117560 Amaranthus hybridus
Ah.02g117580 Amaranthus hybridus
Ah.05g171000 Amaranthus hybridus
Ah.06g188650 Amaranthus hybridus
Ah.13g068100 Amaranthus hybridus
AL1G34950 Arabidopsis lyrata
AL2G37710 Arabidopsis lyrata
Aqoxy1G02960 Aquilegia oxysepala
Aqoxy6G00245 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.99WQY3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KB1BCJ Arachis hypogaea
AT1G21750 Arabidopsis thaliana
AT1G77510 Arabidopsis thaliana
ATR0138G015 Amborella trichopoda
Atru.chr13.1496 Acer truncatum
AUR62000545 Chenopodium quinoa
AUR62006896 Chenopodium quinoa
AUR62014323 Chenopodium quinoa
AUR62019063 Chenopodium quinoa
BcaB03g11880 Brassica carinata
BcaB03g14255 Brassica carinata
BcaB03g15945 Brassica carinata
BcaB04g17174 Brassica carinata
BcaB05g22775 Brassica carinata
BcaB05g25055 Brassica carinata
BcaB07g32174 Brassica carinata
BcaC03g15742 Brassica carinata
BcaC05g26096 Brassica carinata
BcaC05g26097 Brassica carinata
BcaC06g34902 Brassica carinata
BcaC07g39122 Brassica carinata
BcaC08g47604 Brassica carinata
BolC2t09488H Brassica oleracea
BolC5t30775H Brassica oleracea
BolC6t40179H Brassica oleracea
BolC7t42728H Brassica oleracea
BolC8t49747H Brassica oleracea
BraA02t07159Z Brassica rapa
BraA06t24876Z Brassica rapa
BraA07t29239Z Brassica rapa
BraA07t30443Z Brassica rapa
BraA07t31818Z Brassica rapa
BraA08t34810Z Brassica rapa
C02p34630 Brassica napus
C05p20760 Brassica napus
C06p31230 Brassica napus
C06p51610 Brassica napus
C07p21980 Brassica napus
C08p21100 Brassica napus
CAN.G1156.36 Capsicum annuum
CAN.G1392.13 Capsicum annuum
CAN.G643.20 Capsicum annuum
CAN.G780.1 Capsicum annuum
CANSAT25G3371 Cannabis sativa
CARHR022140 Cardamine hirsuta
CARHR071030 Cardamine hirsuta
CARHR259470 Cardamine hirsuta
CARHR259480 Cardamine hirsuta
Carub.0001s2120 Capsella rubella
Carub.0001s2121 Capsella rubella
Carub.0002s2440 Capsella rubella
Ca_16571_v3 Cicer arietinum L.
CBR_g29427 Chara braunii
Cc07_g21280 Coffea canephora
Cc10_g12060 Coffea canephora
CDE04G3518 Ceratophyllum demersum
CDE07G1021 Ceratophyllum demersum
CDE12G0078 Ceratophyllum demersum
Cfa018579 Carpinus fangiana
Cfa025955 Carpinus fangiana
Ciclev10001327m.g Citrus clementina
CiPaw.03G116200 Carya illinoinensis
CiPaw.16G066400 Carya illinoinensis
ClCG08G005800 Citrullus lanatus
ClCG11G015810 Citrullus lanatus
COL.COLO4_24706 Corchorus olitorius
Cpa.g.sc64.100 Carica papaya
CsaV3_4G028170 Cucumis sativus L.
CsaV3_6G034330 Cucumis sativus L.
CSS0023205 Camellia sinensis var. sinensis
CSS0024134 Camellia sinensis var. sinensis
CSS0029657 Camellia sinensis var. sinensis
CSS0039544 Camellia sinensis var. sinensis
CSS0045359 Camellia sinensis var. sinensis
DCAR_009612 Daucus carota
DCAR_014386 Daucus carota
DCAR_019961 Daucus carota
Dinv07205 Davidia involucrata
Dinv27296 Davidia involucrata
Duzib093G0770 Durio zibethinus
Duzib116G0083 Durio zibethinus
ECA233G0516 Erigeron canadensis
ECA233G6000 Erigeron canadensis
ECA246G0027 Erigeron canadensis
EL10Ac1g01033 Beta vulgaris
EL10Ac4g09672 Beta vulgaris
Eucgr.F04345 Eucalyptus grandis
FAN15G1215 Fragaria x ananassa
FAN20G0853 Fragaria x ananassa
FAN24G1770 Fragaria x ananassa
FAN27G1634 Fragaria x ananassa
FvH4_2g27200 Fragaria vesca
Glyma.04G247900 Glycine max
Glyma.06G114700 Glycine max
Glyma.06G114800 Glycine max
Glyma.13G077300 Glycine max
Glyma.14G152000 Glycine max
Gohir.A01G189600 Gossypium hirsutum
Gohir.A05G236000 Gossypium hirsutum
Gohir.A05G269000 Gossypium hirsutum
Gohir.D01G180000 Gossypium hirsutum
Gohir.D02G079900 Gossypium hirsutum
Gohir.D05G238200 Gossypium hirsutum
Gohir.D05G270900 Gossypium hirsutum
Gorai.002G222600 Gossypium raimondii
Gorai.005G089200 Gossypium raimondii
Gorai.009G246700 Gossypium raimondii
Gorai.009G283800 Gossypium raimondii
GSVIVG01008848001 Vitis vinifera
GSVIVG01022364001 Vitis vinifera
HanXRQChr05g0148751 Helianthus annuus
HanXRQChr12g0380501 Helianthus annuus
HanXRQChr12g0380511 Helianthus annuus
HanXRQChr14g0434401 Helianthus annuus
HanXRQChr15g0469271 Helianthus annuus
HanXRQChr15g0469281 Helianthus annuus
Haze_17502 Corylus avellana
Haze_27036 Corylus avellana
Haze_27096 Corylus avellana
Hma1.2p1_0134F.1_g061580 Hydrangea macrophylla
Hma1.2p1_0242F.1_g100730 Hydrangea macrophylla
Hma1.2p1_3125F.1_g332900 Hydrangea macrophylla
HPP92_004459 Vanilla planifolia
Hund07216 Selenicereus undatus
Hund17301 Selenicereus undatus
Hund21794 Selenicereus undatus
Hund26799 Selenicereus undatus
Lalb_Chr08g0241351 Lupinus albus
Lalb_Chr11g0066021 Lupinus albus
Lj1g0012451 Lotus japonicus
Lj1g0020377 Lotus japonicus
Lj4A631T32 Lonicera japonica
Lj7C343G9 Lonicera japonica
Lj7C343T12 Lonicera japonica
Lsat_1_v5_gn_2_37261 Lactuca sativa
Lsat_1_v5_gn_5_68940 Lactuca sativa
Lsat_1_v5_gn_6_95841 Lactuca sativa
Manes.02G164800 Manihot esculenta
Manes.18G078600 Manihot esculenta
Mapoly0004s0104 Marchantia polymorpha
Mapoly0004s0107 Marchantia polymorpha
MBI06_g35525_MAGBIO Magnolia biondii
MCO07G164 Micromonas commoda
MCO07G579 Micromonas commoda
MD04G1082100 Malus domestica
MD08G1161100 Malus domestica
MD15G1346200 Malus domestica
Medtr3g088220 Medicago truncatula
MELO3C010490.2 Cucumis melo
MELO3C010625.2 Cucumis melo
Migut.C01120 Erythranthe guttata
Migut.H00832 Erythranthe guttata
MSTRG.23482 Avicennia marina
MSTRG.25377 Avicennia marina
Nitab4.5_0000322g0140 Nicotiana tabacum
Nitab4.5_0000496g0190 Nicotiana tabacum
Nitab4.5_0002910g0010 Nicotiana tabacum
Nitab4.5_0005339g0050 Nicotiana tabacum
Nitab4.5_0007257g0040 Nicotiana tabacum
Nitab4.5_0007285g0010 Nicotiana tabacum
Nitab4.5_0010209g0010 Nicotiana tabacum
Nitab4.5_0011334g0010 Nicotiana tabacum
Nn1g08862 Nelumbo nucifera
Nn5g28348 Nelumbo nucifera
Oeu028237.2 Olea europaea
Oeu037851.1 Olea europaea
Oeu050100.1 Olea europaea
Oeu059445.1 Olea europaea
Os02g0554900 Oryza sativa ssp. japonica
Os04g0436300 Oryza sativa ssp. japonica
Os11g0199200 Oryza sativa ssp. japonica
Peaxi162Scf00051g00109 Petunia axillaris
Peaxi162Scf00051g01111 Petunia axillaris
Peaxi162Scf00151g00016 Petunia axillaris
Peaxi162Scf00172g00079 Petunia axillaris
Peaxi162Scf00353g00024 Petunia axillaris
PGR044G0158 Punica granatum
PGSC0003DMG400004150 Solanum tuberosum
PGSC0003DMG400014007 Solanum tuberosum
PGSC0003DMG400017569 Solanum tuberosum
PGSC0003DMG401023448 Solanum tuberosum
Phvul.009G126700 Phaseolus vulgaris
Phvul.009G126800 Phaseolus vulgaris
Potri.002G082100 Populus trichocarpa
Potri.005G179000 Populus trichocarpa
Pp3c15_5480 Physcomitrium patens
Prupe.1G494100 Prunus persica
Psat3g068120 Pisum sativum
Psat5g086440 Pisum sativum
PSO170G5237 Papaver somniferum
PSO210G1389 Papaver somniferum
PSO528G0225 Papaver somniferum
PSO761G0506 Papaver somniferum
QL09p034090 Quercus lobata
QL10p039958 Quercus lobata
RcHm_v2.0_Chr4g0414941 Rosa chinensis
RcHm_v2.0_Chr6g0296111 Rosa chinensis
Rhsim10G0129000 Rhododendron simsii
Rhsim11G0069400 Rhododendron simsii
Sabra02G0064300 Salix brachista
Sabra05G0135400 Salix brachista
SalBow7G0535 Salvia bowleyana
Sc09g0002160 Simmondsia chinensis
Sc15g0002850 Simmondsia chinensis
Sed0009545 Sechium edule
Sed0016452 Sechium edule
Sed0019017 Sechium edule
SEGI_40195 Sequoiadendron giganteum
SGA_v2.0_scaffold20G08961 Striga asiatica
SGA_v2.0_scaffold24G10454 Striga asiatica
SGA_v2.0_scaffold52G18959 Striga asiatica
SMO356G0763 Selaginella moellendorffii
Solyc05g018700.4 Solanum lycopersicum
Solyc06g005940.3 Solanum lycopersicum
Solyc06g060290.4 Solanum lycopersicum
Sopen05g015910 Solanum pennellii
Sopen05g034790 Solanum pennellii
Sopen06g001910 Solanum pennellii
Sopen06g020400 Solanum pennellii
Sp1g19310 Schrenkiella parvula
Sp5g32670 Schrenkiella parvula
Sp5g32680 Schrenkiella parvula
Sp5g32690 Schrenkiella parvula
TAR376G0301 Trochodendron aralioides
TAR625G0532 Trochodendron aralioides
TAR628G1234 Trochodendron aralioides
THA.LOC104800203 Tarenaya hassleriana
THA.LOC104813150 Tarenaya hassleriana
THA.LOC104813667 Tarenaya hassleriana
Thecc.08G127800 Theobroma cacao
Thhalv10007438m.g Eutrema salsugineum
Thhalv10018420m.g Eutrema salsugineum
TPR.G19296 Trifolium pratense
TWI34G0025 Tripterygium wilfordii
TWI60G1410 Tripterygium wilfordii
unitig_736.g22646 Utricularia gibba
unitig_749.g13931 Utricularia gibba
unitig_899.g14645 Utricularia gibba
vmacro00842 Vaccinium macrocarpon
vmacro12768 Vaccinium macrocarpon
VMungo1309G0671 Vigna mungo
VMungo1309G2940 Vigna mungo
Zm00001eb112590 Zea mays
Zm00001eb135560 Zea mays
Zm00001eb168910 Zea mays
Zm00001eb265870 Zea mays
Zm00001eb422800 Zea mays

User provided reference genes

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