Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p41850 Brassica napus
A05p04510 Brassica napus
A05p33100 Brassica napus
A07p23250 Brassica napus
A08p03040 Brassica napus
A09p50070 Brassica napus
A09p52570 Brassica napus
Aa31LG10G12040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4532 Anthoceros agrestis
Actinidia07155 Actinidia chinensis
Actinidia07156 Actinidia chinensis
Actinidia14062 Actinidia chinensis
Actinidia24121 Actinidia chinensis
Actinidia38861 Actinidia chinensis
Ah.01g003080 Amaranthus hybridus
Ah.01g014160 Amaranthus hybridus
Ah.05g178470 Amaranthus hybridus
AL5G38600 Arabidopsis lyrata
Aqoxy3G02642 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.508SKJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C2N6SR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SXYI7M Arachis hypogaea
AT3G57120 Arabidopsis thaliana
ATR0605G004 Amborella trichopoda
ATR0680G263 Amborella trichopoda
Atru.chr12.816 Acer truncatum
AUR62022651 Chenopodium quinoa
AUR62022771 Chenopodium quinoa
AUR62029223 Chenopodium quinoa
BcaB02g07620 Brassica carinata
BcaC07g40031 Brassica carinata
BcaC07g40043 Brassica carinata
BcaC07g40072 Brassica carinata
BcaC08g44823 Brassica carinata
BolC3t18506H Brassica oleracea
BolC6t37571H Brassica oleracea
BolC8t50860H Brassica oleracea
BraA07t29989Z Brassica rapa
BraA09t40457Z Brassica rapa
C03p62490 Brassica napus
C06p24130 Brassica napus
C08p32450 Brassica napus
CAN.G2109.4 Capsicum annuum
CAN.G694.93 Capsicum annuum
CANSAT54G0795 Cannabis sativa
CANSAT56G1322 Cannabis sativa
CARHR167300 Cardamine hirsuta
Carub.0005s2393 Capsella rubella
Ca_01393_v3 Cicer arietinum L.
Ca_10555_v3 Cicer arietinum L.
Cc02_g11160 Coffea canephora
Cc11_g05030 Coffea canephora
CDE05G3173 Ceratophyllum demersum
CDE06G1255 Ceratophyllum demersum
CDE11G0654 Ceratophyllum demersum
Cfa001667 Carpinus fangiana
Cfa011287 Carpinus fangiana
Ciclev10028397m.g Citrus clementina
Ciclev10031689m.g Citrus clementina
CiPaw.01G270800 Carya illinoinensis
CiPaw.13G117000 Carya illinoinensis
CiPaw.13G117100 Carya illinoinensis
ClCG02G021310 Citrullus lanatus
ClCG05G021110 Citrullus lanatus
COL.COLO4_18294 Corchorus olitorius
COL.COLO4_38475 Corchorus olitorius
Cpa.g.sc53.96 Carica papaya
Cpa.g.sc65.11 Carica papaya
CsaV3_5G036150 Cucumis sativus L.
CsaV3_6G014110 Cucumis sativus L.
CSS0024838 Camellia sinensis var. sinensis
CSS0039403 Camellia sinensis var. sinensis
DCAR_006427 Daucus carota
DCAR_022756 Daucus carota
Dinv31209 Davidia involucrata
Dinv31210 Davidia involucrata
Dinv31298 Davidia involucrata
Dinv32705 Davidia involucrata
Dinv35770 Davidia involucrata
Dinv36412 Davidia involucrata
Duzib106G0518 Durio zibethinus
Duzib168G0384 Durio zibethinus
Duzib168G1541 Durio zibethinus
ECA233G0057 Erigeron canadensis
ECA233G3212 Erigeron canadensis
EL10Ac3g04999 Beta vulgaris
EL10Ac9g22561 Beta vulgaris
Eucgr.B02528 Eucalyptus grandis
Eucgr.G02855 Eucalyptus grandis
Eucgr.J01076 Eucalyptus grandis
FAN01G2253 Fragaria x ananassa
FAN02G2180 Fragaria x ananassa
FAN03G0107 Fragaria x ananassa
FAN03G0527 Fragaria x ananassa
FAN03G1618 Fragaria x ananassa
FAN03G2365 Fragaria x ananassa
FAN05G1939 Fragaria x ananassa
FAN05G4465 Fragaria x ananassa
FAN05G4918 Fragaria x ananassa
FAN06G0402 Fragaria x ananassa
FAN06G1928 Fragaria x ananassa
FAN08G2832 Fragaria x ananassa
FAN09G0125 Fragaria x ananassa
FAN09G0236 Fragaria x ananassa
FAN10G2711 Fragaria x ananassa
FAN10G2777 Fragaria x ananassa
FAN10G3901 Fragaria x ananassa
FAN10G4153 Fragaria x ananassa
FAN11G1738 Fragaria x ananassa
FAN11G2117 Fragaria x ananassa
FAN12G3081 Fragaria x ananassa
FAN12G3519 Fragaria x ananassa
FAN14G2772 Fragaria x ananassa
FAN14G3475 Fragaria x ananassa
FAN14G4946 Fragaria x ananassa
FAN14G4960 Fragaria x ananassa
FAN15G3313 Fragaria x ananassa
FAN18G2624 Fragaria x ananassa
FAN18G3789 Fragaria x ananassa
FAN18G3910 Fragaria x ananassa
FAN19G1283 Fragaria x ananassa
FAN20G0549 Fragaria x ananassa
FAN20G2790 Fragaria x ananassa
FAN21G0479 Fragaria x ananassa
FAN21G0842 Fragaria x ananassa
FAN21G2121 Fragaria x ananassa
FAN21G3755 Fragaria x ananassa
FAN23G1957 Fragaria x ananassa
FAN25G1674 Fragaria x ananassa
FAN25G2163 Fragaria x ananassa
FAN26G0608 Fragaria x ananassa
FAN27G1749 Fragaria x ananassa
FAN27G2526 Fragaria x ananassa
FvH4_3g31560 Fragaria vesca
FvH4_7g19030 Fragaria vesca
Glyma.10G209500 Glycine max
Glyma.12G176500 Glycine max
Glyma.13G324000 Glycine max
Glyma.20G181100 Glycine max
Gohir.A05G105600 Gossypium hirsutum
Gohir.A05G295000 Gossypium hirsutum
Gohir.A05G412100 Gossypium hirsutum
Gohir.D04G003900 Gossypium hirsutum
Gohir.D05G105600 Gossypium hirsutum
Gohir.D05G295600 Gossypium hirsutum
Gohir.D13G237100 Gossypium hirsutum
Gorai.009G109600 Gossypium raimondii
Gorai.009G312300 Gossypium raimondii
Gorai.012G005200 Gossypium raimondii
Gorai.013G267800 Gossypium raimondii
GSVIVG01016245001 Vitis vinifera
HanXRQChr08g0218741 Helianthus annuus
HanXRQChr13g0396701 Helianthus annuus
Haze_16865 Corylus avellana
Haze_23771 Corylus avellana
Hma1.2p1_0297F.1_g117100 Hydrangea macrophylla
Hma1.2p1_1458F.1_g284760 Hydrangea macrophylla
Hma1.2p1_2264F.1_g318380 Hydrangea macrophylla
HPP92_007163 Vanilla planifolia
HPP92_007164 Vanilla planifolia
HPP92_007167 Vanilla planifolia
HPP92_025803 Vanilla planifolia
Hund01481 Selenicereus undatus
Lalb_Chr02g0152271 Lupinus albus
Lalb_Chr24g0394771 Lupinus albus
Lj2P1018T22 Lonicera japonica
Lj3g0007482 Lotus japonicus
Lj3P882T55 Lonicera japonica
Lj5g0010850 Lotus japonicus
Lsat_1_v5_gn_6_45240 Lactuca sativa
Lsat_1_v5_gn_8_20440 Lactuca sativa
Manes.04G017400 Manihot esculenta
Manes.07G097200 Manihot esculenta
Manes.10G048600 Manihot esculenta
Mapoly0013s0080 Marchantia polymorpha
MBI18_g14001_MAGBIO Magnolia biondii
MBI18_g39952_MAGBIO Magnolia biondii
MD01G1105700 Malus domestica
MD03G1123700 Malus domestica
MD07G1172200 Malus domestica
MD12G1106300 Malus domestica
Medtr1g094730 Medicago truncatula
Medtr2g095180 Medicago truncatula
MELO3C012416.2 Cucumis melo
MELO3C026922.2 Cucumis melo
Migut.D02249 Erythranthe guttata
MSTRG.9154 Avicennia marina
Nitab4.5_0000106g0310 Nicotiana tabacum
Nitab4.5_0000582g0140 Nicotiana tabacum
Nitab4.5_0006343g0010 Nicotiana tabacum
Nitab4.5_0009827g0010 Nicotiana tabacum
Nn2g11533 Nelumbo nucifera
Nn2g13744 Nelumbo nucifera
Nn7g37533 Nelumbo nucifera
Oeu014006.1 Olea europaea
Oeu031327.1 Olea europaea
Oeu032815.1 Olea europaea
Oeu034808.1 Olea europaea
Os02g0819900 Oryza sativa ssp. japonica
Os09g0572100 Oryza sativa ssp. japonica
Peaxi162Scf00029g00171 Petunia axillaris
Peaxi162Scf00858g00023 Petunia axillaris
PGR044G1856 Punica granatum
PGR142G2320 Punica granatum
PGSC0003DMG400012000 Solanum tuberosum
PGSC0003DMG400023457 Solanum tuberosum
Phvul.005G132600 Phaseolus vulgaris
Phvul.007G096600 Phaseolus vulgaris
Potri.008G037401 Populus trichocarpa
Potri.008G037501 Populus trichocarpa
Potri.009G009600 Populus trichocarpa
Potri.010G224900 Populus trichocarpa
Pp3c13_11820 Physcomitrium patens
Pp3c15_17150 Physcomitrium patens
Pp3c26_14600 Physcomitrium patens
Pp3c3_9680 Physcomitrium patens
Pp3c4_28050 Physcomitrium patens
Prupe.2G210800 Prunus persica
Prupe.2G211100 Prunus persica
Prupe.6G106100 Prunus persica
Psat5g279560 Pisum sativum
Psat6g182400 Pisum sativum
PSO339G3717 Papaver somniferum
PSO801G0428 Papaver somniferum
PSO801G0493 Papaver somniferum
QL01p021047 Quercus lobata
QL08p055175 Quercus lobata
RcHm_v2.0_Chr1g0362941 Rosa chinensis
RcHm_v2.0_Chr5g0058201 Rosa chinensis
Rhsim02G0095300 Rhododendron simsii
Rhsim09G0149900 Rhododendron simsii
Rhsim13G0097700 Rhododendron simsii
Sabra08G0025200 Salix brachista
Sabra08G0025300 Salix brachista
Sabra09G0005900 Salix brachista
Sabra10G0173900 Salix brachista
SalBow4G1829 Salvia bowleyana
SalBow4G3314 Salvia bowleyana
Sc06g0010390 Simmondsia chinensis
Sc20g0001650 Simmondsia chinensis
Sed0009307 Sechium edule
Sed0013683 Sechium edule
Sed0017174 Sechium edule
SEGI_04009 Sequoiadendron giganteum
SEGI_18936 Sequoiadendron giganteum
SEGI_34587 Sequoiadendron giganteum
SEGI_38490 Sequoiadendron giganteum
SEGI_40233 Sequoiadendron giganteum
SGA_v2.0_scaffold180G39630 Striga asiatica
SGA_v2.0_scaffold62G21401 Striga asiatica
SHI20569 Sapria himalayana
SMO118G0326 Selaginella moellendorffii
Solyc05g056200.1 Solanum lycopersicum
Solyc06g075030.1 Solanum lycopersicum
Sopen05g034590 Solanum pennellii
Sopen06g031460 Solanum pennellii
Sp5g05450 Schrenkiella parvula
TAR369G1074 Trochodendron aralioides
TAR623G0887 Trochodendron aralioides
THA.LOC104814780 Tarenaya hassleriana
THA.LOC104815740 Tarenaya hassleriana
THA.LOC104826378 Tarenaya hassleriana
Thecc.09G345200 Theobroma cacao
Thecc.10G078600 Theobroma cacao
Thhalv10005991m.g Eutrema salsugineum
TPR.G11617 Trifolium pratense
TWI31G1486 Tripterygium wilfordii
TWI63G0762 Tripterygium wilfordii
TWI79G1127 Tripterygium wilfordii
vmacro04856 Vaccinium macrocarpon
VMungo0720G2464 Vigna mungo
VMungo1080G0414 Vigna mungo
Zm00001eb191240 Zea mays
Zm00001eb259120 Zea mays
Zm00001eb279230 Zea mays
Zm00001eb373000 Zea mays

User provided reference genes

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