Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p08710 Brassica napus
Ah.08g221550 Amaranthus hybridus
Ah.08g222950 Amaranthus hybridus
Ah.09g227340 Amaranthus hybridus
Ah.10g027250 Amaranthus hybridus
Ah.10g027270 Amaranthus hybridus
Ah.10g027400 Amaranthus hybridus
Ah.10g027690 Amaranthus hybridus
Ah.10g027710 Amaranthus hybridus
Ah.10g029040 Amaranthus hybridus
AL1G51250 Arabidopsis lyrata
AL2G21880 Arabidopsis lyrata
AL7G44090 Arabidopsis lyrata
AL9U12010 Arabidopsis lyrata
Aqoxy4G02025 Aquilegia oxysepala
Aqoxy7G01466 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4TE0T7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8K22SI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8K87SY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9LD85R Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9SR1J1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ASG6ZP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.G8GDNC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IYH8UQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JVWB4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L5SUCM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MUY2HZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P3G9EK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QZI0U6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RWFL12 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V7RS39 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Z8FS1H Arachis hypogaea
ATCG00900 Arabidopsis thaliana
ATCG01240 Arabidopsis thaliana
ATR1169G001 Amborella trichopoda
Atru.chr12.138 Acer truncatum
Atru.chr2.735 Acer truncatum
Atru.chr2.739 Acer truncatum
Atru.chr3.4250 Acer truncatum
AUR62025890 Chenopodium quinoa
BcaB02g11352 Brassica carinata
BcaB03g16403 Brassica carinata
BNapus_Darmor_BZH_scaffold_147p00020 Brassica napus
BolC2t10587H Brassica oleracea
BolC2t10607H Brassica oleracea
BolC6t36195H Brassica oleracea
BolC7t41701H Brassica oleracea
BolSC29t60495H Brassica oleracea
BolSC29t60516H Brassica oleracea
BolSC29t60559H Brassica oleracea
BolSC35t60717H Brassica oleracea
BolSC37t60785H Brassica oleracea
BolSC44t60834H Brassica oleracea
BolSC45t60897H Brassica oleracea
BolSC46t60953H Brassica oleracea
BolSC46t60970H Brassica oleracea
BolSC49t61155H Brassica oleracea
BolSC49t61216H Brassica oleracea
BraA07t28396Z Brassica rapa
BraSC103t45494Z Brassica rapa
BraSC138t45522Z Brassica rapa
BraSC138t45542Z Brassica rapa
BraSC143t45647Z Brassica rapa
BraSC143t45668Z Brassica rapa
BraSC179t45784Z Brassica rapa
BraSC25t45898Z Brassica rapa
BraSC58t46450Z Brassica rapa
BraSC58t46468Z Brassica rapa
BraSC59t46513Z Brassica rapa
BraSC59t46539Z Brassica rapa
BraSC59t46560Z Brassica rapa
C06p23130 Brassica napus
C09p24720 Brassica napus
CAN.G1178.1 Capsicum annuum
CAN.G134.5 Capsicum annuum
CAN.G21.57 Capsicum annuum
CAN.G255.19 Capsicum annuum
CAN.G343.4 Capsicum annuum
CAN.G886.8 Capsicum annuum
CARHR282340 Cardamine hirsuta
CARHR282520 Cardamine hirsuta
Ca_09321_v3 Cicer arietinum L.
CDE02G2847 Ceratophyllum demersum
Cfa021581 Carpinus fangiana
CsaV3_6G016780 Cucumis sativus L.
CsaV3_UNG208960 Cucumis sativus L.
CSS0004900 Camellia sinensis var. sinensis
CSS0008506 Camellia sinensis var. sinensis
CSS0008555 Camellia sinensis var. sinensis
CSS0047899 Camellia sinensis var. sinensis
DCAR_010481 Daucus carota
DCAR_010482 Daucus carota
DCAR_032531 Daucus carota
DCAR_032545 Daucus carota
ECA074G0002 Erigeron canadensis
ECA074G0004 Erigeron canadensis
ECA169G0005 Erigeron canadensis
EL10Ac2g02910 Beta vulgaris
EL10Ac4g08619 Beta vulgaris
EL10Ac5g11085 Beta vulgaris
EL10Ac5g11386 Beta vulgaris
EL10As12g24041 Beta vulgaris
EL10As15g24105 Beta vulgaris
Eucgr.H01180 Eucalyptus grandis
Eucgr.I00426 Eucalyptus grandis
Eucgr.K01908 Eucalyptus grandis
FvH4_c3g00120 Fragaria vesca
Glyma.13G245200 Glycine max
Gohir.A04G039400 Gossypium hirsutum
Gohir.A05G142150 Gossypium hirsutum
Gohir.A05G323788 Gossypium hirsutum
Gohir.A08G015300 Gossypium hirsutum
Gohir.A09G045700 Gossypium hirsutum
Gohir.A11G180164 Gossypium hirsutum
Gohir.A12G124800 Gossypium hirsutum
Gohir.D02G117488 Gossypium hirsutum
Gohir.D02G133700 Gossypium hirsutum
Gohir.D02G152108 Gossypium hirsutum
Gohir.D04G096596 Gossypium hirsutum
Gohir.D08G218225 Gossypium hirsutum
Gorai.001G269800 Gossypium raimondii
Gorai.002G022200 Gossypium raimondii
Gorai.004G116400 Gossypium raimondii
Gorai.011G192400 Gossypium raimondii
Gorai.013G212500 Gossypium raimondii
HanXRQChr00c0214g0572651 Helianthus annuus
HanXRQChr00c0264g0572881 Helianthus annuus
HanXRQChr00c0349g0574011 Helianthus annuus
HanXRQChr00c0386g0574431 Helianthus annuus
HanXRQChr00c0454g0574891 Helianthus annuus
HanXRQChr00c0561g0575911 Helianthus annuus
HanXRQChr00c0625g0576561 Helianthus annuus
HanXRQChr00c0634g0576571 Helianthus annuus
HanXRQChr00c0747g0577141 Helianthus annuus
HanXRQChr01g0020141 Helianthus annuus
HanXRQChr02g0059641 Helianthus annuus
HanXRQChr03g0062801 Helianthus annuus
HanXRQChr04g0123001 Helianthus annuus
HanXRQChr04g0127401 Helianthus annuus
HanXRQChr05g0152361 Helianthus annuus
HanXRQChr05g0152481 Helianthus annuus
HanXRQChr07g0194891 Helianthus annuus
HanXRQChr08g0221201 Helianthus annuus
HanXRQChr09g0260861 Helianthus annuus
HanXRQChr10g0317941 Helianthus annuus
HanXRQChr11g0321191 Helianthus annuus
HanXRQChr11g0327121 Helianthus annuus
HanXRQChr11g0333781 Helianthus annuus
HanXRQChr12g0369931 Helianthus annuus
HanXRQChr13g0403051 Helianthus annuus
HanXRQChr13g0413661 Helianthus annuus
HanXRQChr13g0413731 Helianthus annuus
HanXRQChr13g0413811 Helianthus annuus
HanXRQChr13g0413881 Helianthus annuus
HanXRQChr13g0416571 Helianthus annuus
HanXRQChr15g0489691 Helianthus annuus
HanXRQChr16g0530781 Helianthus annuus
HanXRQChr17g0569671 Helianthus annuus
HanXRQCPg0580281 Helianthus annuus
HanXRQCPg0580441 Helianthus annuus
Haze_27063 Corylus avellana
Hma1.2p1_0357F.1_g134440 Hydrangea macrophylla
Hma1.2p1_1244F.1_g270070 Hydrangea macrophylla
Hma1.2p1_1266F.1_g271445 Hydrangea macrophylla
Hund01553 Selenicereus undatus
Hund03962 Selenicereus undatus
Hund03964 Selenicereus undatus
Hund15219 Selenicereus undatus
Lalb_Chr03g0039261 Lupinus albus
Lalb_Chr07g0191601 Lupinus albus
Lalb_Chr07g0191641 Lupinus albus
Lalb_Chr12g0202141 Lupinus albus
Lalb_Chr24g0400841 Lupinus albus
Lalb_Chr25g0281791 Lupinus albus
Lj1g0023002 Lotus japonicus
LjContig00318g0011220 Lotus japonicus
LjContig00489g0020564 Lotus japonicus
Lsat_1_v5_gn_0_40440 Lactuca sativa
Lsat_1_v5_gn_1_95081 Lactuca sativa
Lsat_1_v5_gn_3_14241 Lactuca sativa
Lsat_1_v5_gn_7_301 Lactuca sativa
Lsat_1_v5_gn_8_77220 Lactuca sativa
Lsat_1_v5_gn_9_5741 Lactuca sativa
Manes.17G022247 Manihot esculenta
MBI17_g45616_MAGBIO Magnolia biondii
MD01G1004700 Malus domestica
Medtr0002s0300 Medicago truncatula
Medtr4g103280 Medicago truncatula
MELO3C003985.2 Cucumis melo
MELO3C027805.2 Cucumis melo
MELO3C031267.2 Cucumis melo
Migut.D01377 Erythranthe guttata
Migut.F01145 Erythranthe guttata
Migut.F01471 Erythranthe guttata
Migut.L01139 Erythranthe guttata
MSTRG.26838 Avicennia marina
Nitab4.5_0000729g0050 Nicotiana tabacum
Nitab4.5_0001478g0220 Nicotiana tabacum
Nitab4.5_0003957g0020 Nicotiana tabacum
Nitab4.5_0004394g0040 Nicotiana tabacum
Nitab4.5_0004533g0050 Nicotiana tabacum
Nitab4.5_0007104g0050 Nicotiana tabacum
Nitab4.5_0007979g0040 Nicotiana tabacum
Nitab4.5_0012558g0020 Nicotiana tabacum
Oeu012824.1 Olea europaea
Oeu038564.1 Olea europaea
Oeu041413.1 Olea europaea
Oeu054715.1 Olea europaea
Os01g0856850 Oryza sativa ssp. japonica
Os09g0110750 Oryza sativa ssp. japonica
Peaxi162Scf00085g02315 Petunia axillaris
Peaxi162Scf00987g00214 Petunia axillaris
PGR111G0089 Punica granatum
PGR111G0112 Punica granatum
PGSC0003DMG400011820 Solanum tuberosum
PGSC0003DMG400038200 Solanum tuberosum
Phvul.001G126100 Phaseolus vulgaris
Phvul.002G090566 Phaseolus vulgaris
Phvul.003G089801 Phaseolus vulgaris
Phvul.004G079700 Phaseolus vulgaris
Phvul.006G026640 Phaseolus vulgaris
Phvul.009G090260 Phaseolus vulgaris
Phvul.011G081400 Phaseolus vulgaris
Potri.004G140500 Populus trichocarpa
Potri.011G075200 Populus trichocarpa
Potri.011G084201 Populus trichocarpa
Potri.013G138900 Populus trichocarpa
Prupe.4G252200 Prunus persica
Psat1g055680 Pisum sativum
Psat5g119080 Pisum sativum
Psat5g286080 Pisum sativum
Psat5g304360 Pisum sativum
Psat6g178720 Pisum sativum
PSO339G5440 Papaver somniferum
PSO357G0336 Papaver somniferum
PSO548G0047 Papaver somniferum
PSO548G0056 Papaver somniferum
QL93p0823_0003 Quercus lobata
RcHm_v2.0_Chr7g0221081 Rosa chinensis
Sabra04G0092400 Salix brachista
SalBow1G2460 Salvia bowleyana
SalBow1G5916 Salvia bowleyana
SalBow1G7983 Salvia bowleyana
SalBow6G5072 Salvia bowleyana
Sc03g0010030 Simmondsia chinensis
Sc05g0004070 Simmondsia chinensis
Sc25g0001950 Simmondsia chinensis
Sc25g0001990 Simmondsia chinensis
ScUNg0000280 Simmondsia chinensis
ScUNg0001200 Simmondsia chinensis
Sed0005474 Sechium edule
Sed0007281 Sechium edule
Sed0014732 Sechium edule
Sed0020144 Sechium edule
Sed0027321 Sechium edule
SEGI_05788 Sequoiadendron giganteum
SMO086G0026 Selaginella moellendorffii
SMO364G0207 Selaginella moellendorffii
Sopen02g009110 Solanum pennellii
TAR633G0118 Trochodendron aralioides
TAR636G2773 Trochodendron aralioides
Thhalv10011843m.g Eutrema salsugineum
TPR.G15893 Trifolium pratense
TWI12G0616 Tripterygium wilfordii
unitig_87.g27921 Utricularia gibba
unitig_91.g26488 Utricularia gibba
unitig_91.g26517 Utricularia gibba
unitig_91.g26529 Utricularia gibba
VMungo0009G0001 Vigna mungo
VMungo0464G1559 Vigna mungo
Zm00001eb009520 Zea mays
Zm00001eb412340 Zea mays
Zm00001eb435130 Zea mays
Zm00001eb437080 Zea mays
Zm00001eb437740 Zea mays
Zm00001eb442130 Zea mays

User provided reference genes

Program Settings