Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p13620 Brassica napus
A07p29980 Brassica napus
Aa31LG4G11260 Aethionema arabicum
Aa31LG4G3350 Aethionema arabicum
Aa31LG7G2580 Aethionema arabicum
Actinidia21635 Actinidia chinensis
Actinidia33818 Actinidia chinensis
Actinidia33819 Actinidia chinensis
Ah.04g159190 Amaranthus hybridus
Ah.14g085770 Amaranthus hybridus
AL1G30100 Arabidopsis lyrata
AL2G32820 Arabidopsis lyrata
AL2G32830 Arabidopsis lyrata
Aqoxy6G02042 Aquilegia oxysepala
Aqoxy6G02372 Aquilegia oxysepala
Aqoxy7G03163 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1L0XSC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6EK4ED Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DUEZ3B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JVX2H3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MB3Q2U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QB387P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RCF1IQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UC5N5L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UUXJ7Q Arachis hypogaea
AT1G17750 Arabidopsis thaliana
AT1G73066 Arabidopsis thaliana
AT1G73080 Arabidopsis thaliana
ATR0579G048 Amborella trichopoda
ATR0579G126 Amborella trichopoda
ATR0580G151 Amborella trichopoda
Atru.chr1.2777 Acer truncatum
Atru.chr12.2370 Acer truncatum
AUR62000279 Chenopodium quinoa
AUR62006627 Chenopodium quinoa
AUR62033037 Chenopodium quinoa
AUR62040755 Chenopodium quinoa
BcaB07g33995 Brassica carinata
BcaB07g34001 Brassica carinata
BcaB07g34028 Brassica carinata
BcaB07g34029 Brassica carinata
BcaC05g25693 Brassica carinata
BcaC08g45675 Brassica carinata
BcaC08g47016 Brassica carinata
BcaC08g47355 Brassica carinata
BolC5t30314H Brassica oleracea
BolC6t38549H Brassica oleracea
BolC6t39976H Brassica oleracea
BraA06t24513Z Brassica rapa
BraA07t30636Z Brassica rapa
C05p16140 Brassica napus
C06p34330 Brassica napus
C06p49410 Brassica napus
CAN.G303.1 Capsicum annuum
CAN.G303.2 Capsicum annuum
CAN.G303.4 Capsicum annuum
CAN.G790.29 Capsicum annuum
CAN.G790.32 Capsicum annuum
CANSAT01G1511 Cannabis sativa
CANSAT01G2271 Cannabis sativa
CANSAT21G2096 Cannabis sativa
CARHR018360 Cardamine hirsuta
CARHR066040 Cardamine hirsuta
CARHR066050 Cardamine hirsuta
Carub.0001s1748 Capsella rubella
Carub.0002s1985 Capsella rubella
Ca_00985_v3 Cicer arietinum L.
Ca_00999_v3 Cicer arietinum L.
Ca_06130_v3 Cicer arietinum L.
Ca_06142_v3 Cicer arietinum L.
Cc04_g00430 Coffea canephora
CDE12G0402 Ceratophyllum demersum
Cfa021397 Carpinus fangiana
Ciclev10018613m.g Citrus clementina
Ciclev10024756m.g Citrus clementina
CiPaw.05G203200 Carya illinoinensis
CiPaw.16G093800 Carya illinoinensis
ClCG07G014170 Citrullus lanatus
COL.COLO4_14354 Corchorus olitorius
Cpa.g.c27606.2 Carica papaya
CsaV3_3G031210 Cucumis sativus L.
CsaV3_3G031220 Cucumis sativus L.
CsaV3_UNG227850 Cucumis sativus L.
CsaV3_UNG227870 Cucumis sativus L.
CSS0037808 Camellia sinensis var. sinensis
CSS0039856 Camellia sinensis var. sinensis
DCAR_026433 Daucus carota
Dinv29223 Davidia involucrata
Dinv37802 Davidia involucrata
Duzib205G0195 Durio zibethinus
Duzib205G0240 Durio zibethinus
Duzib205G0290 Durio zibethinus
Duzib235G1298 Durio zibethinus
ECA232G4700 Erigeron canadensis
ECA247G0406 Erigeron canadensis
EL10Ac4g10016 Beta vulgaris
EL10Ac8g19461 Beta vulgaris
Eucgr.F04005 Eucalyptus grandis
Eucgr.F04007 Eucalyptus grandis
FAN02G2390 Fragaria x ananassa
FAN02G3136 Fragaria x ananassa
FAN05G1949 Fragaria x ananassa
FAN05G3853 Fragaria x ananassa
FAN09G1043 Fragaria x ananassa
FAN09G2714 Fragaria x ananassa
FAN14G2150 Fragaria x ananassa
FAN14G3707 Fragaria x ananassa
FvH4_6g37420 Fragaria vesca
FvH4_6g37430 Fragaria vesca
Glyma.10G195700 Glycine max
Glyma.15G001500 Glycine max
Glyma.20G194400 Glycine max
Gohir.A08G104550 Gossypium hirsutum
Gohir.A10G007600 Gossypium hirsutum
Gohir.D08G115400 Gossypium hirsutum
Gohir.D10G007500 Gossypium hirsutum
Gorai.004G124300 Gossypium raimondii
Gorai.011G008200 Gossypium raimondii
GSVIVG01016126001 Vitis vinifera
GSVIVG01038628001 Vitis vinifera
HanXRQChr04g0098181 Helianthus annuus
HanXRQChr09g0277381 Helianthus annuus
HanXRQChr15g0497391 Helianthus annuus
Haze_18878 Corylus avellana
Hma1.2p1_1104F.1_g257410 Hydrangea macrophylla
HPP92_001743 Vanilla planifolia
HPP92_010755 Vanilla planifolia
HPP92_010756 Vanilla planifolia
HPP92_010757 Vanilla planifolia
Hund21921 Selenicereus undatus
Hund21922 Selenicereus undatus
Hund21923 Selenicereus undatus
Lalb_Chr02g0150951 Lupinus albus
Lalb_Chr17g0347401 Lupinus albus
Lalb_Chr17g0347411 Lupinus albus
Lalb_Chr24g0393671 Lupinus albus
Lj3g0017714 Lotus japonicus
Lj5C25G7 Lonicera japonica
Lj5C25T13 Lonicera japonica
Lsat_1_v5_gn_4_88801 Lactuca sativa
Lsat_1_v5_gn_4_88821 Lactuca sativa
Manes.01G041700 Manihot esculenta
Manes.04G099066 Manihot esculenta
Manes.04G099100 Manihot esculenta
Manes.04G099300 Manihot esculenta
Manes.16G045200 Manihot esculenta
Mapoly0039s0122 Marchantia polymorpha
Mapoly0089s0004 Marchantia polymorpha
MBI04_g43052_MAGBIO Magnolia biondii
MBI16_g00669_MAGBIO Magnolia biondii
MD09G1158300 Malus domestica
MD17G1144300 Malus domestica
Medtr1g090520 Medicago truncatula
Medtr2g105680 Medicago truncatula
Medtr5g087340 Medicago truncatula
Medtr5g087350 Medicago truncatula
Medtr5g087360 Medicago truncatula
Medtr5g087370 Medicago truncatula
Medtr7g092880 Medicago truncatula
MELO3C025794.2 Cucumis melo
MELO3C025795.2 Cucumis melo
Migut.I01152 Erythranthe guttata
MSTRG.22507 Avicennia marina
Nitab4.5_0000319g0190 Nicotiana tabacum
Nitab4.5_0001691g0080 Nicotiana tabacum
Nitab4.5_0002885g0070 Nicotiana tabacum
Nitab4.5_0011775g0010 Nicotiana tabacum
Nn1g04202 Nelumbo nucifera
Nn2g12617 Nelumbo nucifera
Nn8g40362 Nelumbo nucifera
Nn8g40364 Nelumbo nucifera
Oeu023681.1 Olea europaea
Os08g0446200 Oryza sativa ssp. japonica
Os08g0446301 Oryza sativa ssp. japonica
Os10g0155700 Oryza sativa ssp. japonica
Os10g0155800 Oryza sativa ssp. japonica
Peaxi162Scf00038g02434 Petunia axillaris
Peaxi162Scf00740g00513 Petunia axillaris
Peaxi162Scf00740g00551 Petunia axillaris
Peaxi162Scf00740g00565 Petunia axillaris
Peaxi162Scf05871g00001 Petunia axillaris
PGSC0003DMG400003210 Solanum tuberosum
PGSC0003DMG400003211 Solanum tuberosum
PGSC0003DMG401009161 Solanum tuberosum
Phvul.005G184700 Phaseolus vulgaris
Phvul.007G137800 Phaseolus vulgaris
Phvul.011G166400 Phaseolus vulgaris
Potri.008G007600 Populus trichocarpa
Potri.008G009300 Populus trichocarpa
Potri.012G022800 Populus trichocarpa
Pp3c2_18570 Physcomitrium patens
Pp3c4_29120 Physcomitrium patens
Pp3c4_29300 Physcomitrium patens
Prupe.3G167700 Prunus persica
Prupe.3G167800 Prunus persica
Prupe.3G167900 Prunus persica
Psat5g046760 Pisum sativum
Psat5g299600 Pisum sativum
Psat6g171960 Pisum sativum
PSO017G5321 Papaver somniferum
PSO063G2705 Papaver somniferum
PSO478G5170 Papaver somniferum
PSO724G0700 Papaver somniferum
PSO724G1298 Papaver somniferum
QL05p036194 Quercus lobata
QL09p007377 Quercus lobata
QL10p030477 Quercus lobata
RcHm_v2.0_Chr2g0150241 Rosa chinensis
Rhsim01G0086400 Rhododendron simsii
Rhsim08G0247000 Rhododendron simsii
RhsimUnG0089600 Rhododendron simsii
Sabra08G0005300 Salix brachista
Sabra12G0011000 Salix brachista
SalBow6G1033 Salvia bowleyana
SalBow6G2159 Salvia bowleyana
SalBow6G2676 Salvia bowleyana
Sc02g0006120 Simmondsia chinensis
Sc12g0007700 Simmondsia chinensis
Sc12g0007710 Simmondsia chinensis
Sed0005839 Sechium edule
Sed0009650 Sechium edule
Sed0011450 Sechium edule
SEGI_00741 Sequoiadendron giganteum
SEGI_03165 Sequoiadendron giganteum
SEGI_03739 Sequoiadendron giganteum
SEGI_13169 Sequoiadendron giganteum
SEGI_16007 Sequoiadendron giganteum
SEGI_22657 Sequoiadendron giganteum
SEGI_33588 Sequoiadendron giganteum
SEGI_36629 Sequoiadendron giganteum
SEGI_37298 Sequoiadendron giganteum
SGA_v2.0_scaffold71G24014 Striga asiatica
SMO200G0215 Selaginella moellendorffii
SMO356G0662 Selaginella moellendorffii
Solyc03g082450.3 Solanum lycopersicum
Solyc03g123860.4 Solanum lycopersicum
Sopen03g022170 Solanum pennellii
Sopen03g022190 Solanum pennellii
Sopen03g041600 Solanum pennellii
Sp1g15830 Schrenkiella parvula
Sp5g28040 Schrenkiella parvula
TAR375G0566 Trochodendron aralioides
TAR559G0001 Trochodendron aralioides
TAR625G0481 Trochodendron aralioides
TAR625G0533 Trochodendron aralioides
THA.LOC104799947 Tarenaya hassleriana
THA.LOC104823328 Tarenaya hassleriana
Thecc.03G207000 Theobroma cacao
Thecc.06G016200 Theobroma cacao
Thhalv10018036m.g Eutrema salsugineum
Thhalv10019857m.g Eutrema salsugineum
TPR.G11386 Trifolium pratense
TPR.G1170 Trifolium pratense
TPR.G13302 Trifolium pratense
TPR.G22648 Trifolium pratense
TPR.G23714 Trifolium pratense
TPR.G29903 Trifolium pratense
TPR.G29910 Trifolium pratense
TPR.G29911 Trifolium pratense
TPR.G29913 Trifolium pratense
TPR.G29920 Trifolium pratense
TPR.G31191 Trifolium pratense
TPR.G31787 Trifolium pratense
TPR.G3503 Trifolium pratense
TPR.G37759 Trifolium pratense
TWI12G0471 Tripterygium wilfordii
TWI23G0691 Tripterygium wilfordii
TWI39G1249 Tripterygium wilfordii
vmacro18700 Vaccinium macrocarpon
VMungo0720G0056 Vigna mungo
VMungo0720G1393 Vigna mungo
VMungo1080G0163 Vigna mungo
VMungo1127G0087 Vigna mungo
Zm00001eb026550 Zea mays
Zm00001eb034800 Zea mays
Zm00001eb040920 Zea mays
Zm00001eb177060 Zea mays

User provided reference genes

Program Settings