Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p41930 Brassica napus
A03p25650 Brassica napus
A06p28750 Brassica napus
Aa31LG11G1480 Aethionema arabicum
Aa31LG1G27780 Aethionema arabicum
Aa31LG1G27790 Aethionema arabicum
Aa31LG1G27800 Aethionema arabicum
Aa31LG1G27810 Aethionema arabicum
Aa31LG5G18540 Aethionema arabicum
Aa31LG7G1770 Aethionema arabicum
Aa31LG7G1780 Aethionema arabicum
Aa31sc1839G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3538 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.702 Anthoceros agrestis
Actinidia04202 Actinidia chinensis
Actinidia22155 Actinidia chinensis
Actinidia27317 Actinidia chinensis
Ah.12g052540 Amaranthus hybridus
Ah.13g065850 Amaranthus hybridus
AL4G45780 Arabidopsis lyrata
AL5G28850 Arabidopsis lyrata
AL8G38820 Arabidopsis lyrata
Aqoxy5G04225 Aquilegia oxysepala
Aqoxy7G00111 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.EY65RF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H71861 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R32419 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SMD748 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X1WEHF Arachis hypogaea
AT2G46470 Arabidopsis thaliana
AT3G49155 Arabidopsis thaliana
AT5G62050 Arabidopsis thaliana
ATR0763G065 Amborella trichopoda
ATR0763G099 Amborella trichopoda
Atru.chr12.1156 Acer truncatum
Atru.chr9.1999 Acer truncatum
AUR62004481 Chenopodium quinoa
AUR62010838 Chenopodium quinoa
AUR62019837 Chenopodium quinoa
AUR62023471 Chenopodium quinoa
AUR62023472 Chenopodium quinoa
AUR62023535 Chenopodium quinoa
BcaB01g03216 Brassica carinata
BcaB02g09617 Brassica carinata
BcaB02g09618 Brassica carinata
BcaB04g17349 Brassica carinata
BcaB06g25998 Brassica carinata
BcaC01g05067 Brassica carinata
BcaC03g18118 Brassica carinata
BcaC07g38090 Brassica carinata
BcaC08g43839 Brassica carinata
BolC1t02538H Brassica oleracea
BolC2t12241H Brassica oleracea
BolC3t15411H Brassica oleracea
BolC3t18752H Brassica oleracea
BolC6t36363H Brassica oleracea
BraA02t09128Z Brassica rapa
BraA03t11780Z Brassica rapa
BraA06t25816Z Brassica rapa
C02p61840 Brassica napus
C03p30610 Brassica napus
C03p64900 Brassica napus
C06p12180 Brassica napus
CAN.G532.120 Capsicum annuum
CAN.G792.39 Capsicum annuum
CANSAT21G2386 Cannabis sativa
CARHR141770 Cardamine hirsuta
CARHR275840 Cardamine hirsuta
Carub.0004s2915 Capsella rubella
Carub.0008s2273 Capsella rubella
Ca_18517_v3 Cicer arietinum L.
CBR_g20997 Chara braunii
Cc00_g30690 Coffea canephora
Cc08_g16040 Coffea canephora
CDE02G2069 Ceratophyllum demersum
CDE02G2859 Ceratophyllum demersum
CDE09G1109 Ceratophyllum demersum
Cfa006406 Carpinus fangiana
Cfa006407 Carpinus fangiana
Cfa023939 Carpinus fangiana
Ciclev10020194m.g Citrus clementina
CiPaw.11G121700 Carya illinoinensis
CiPaw.12G083300 Carya illinoinensis
ClCG07G015030 Citrullus lanatus
COL.COLO4_06294 Corchorus olitorius
COL.COLO4_10696 Corchorus olitorius
Cpa.g.sc1.157 Carica papaya
Cpa.g.sc1.159 Carica papaya
Cpa.g.sc96.2 Carica papaya
Cpa.g.sc96.4 Carica papaya
Cre16.g690200 Chlamydomonas reinhardtii
CsaV3_4G006570 Cucumis sativus L.
CSS0016367 Camellia sinensis var. sinensis
CSS0030360 Camellia sinensis var. sinensis
CSS0049945 Camellia sinensis var. sinensis
DCAR_005044 Daucus carota
DCAR_027702 Daucus carota
Dinv37532 Davidia involucrata
Dinv38832 Davidia involucrata
Duzib068G0387 Durio zibethinus
Duzib205G0860 Durio zibethinus
ECA246G3661 Erigeron canadensis
ECA248G0759 Erigeron canadensis
EL10Ac5g12913 Beta vulgaris
Eucgr.E00058 Eucalyptus grandis
Eucgr.E00060 Eucalyptus grandis
Eucgr.E00860 Eucalyptus grandis
FAN01G2053 Fragaria x ananassa
FAN04G0835 Fragaria x ananassa
FAN06G0145 Fragaria x ananassa
FAN06G4253 Fragaria x ananassa
FAN08G3549 Fragaria x ananassa
FAN10G0122 Fragaria x ananassa
FAN10G3207 Fragaria x ananassa
FAN13G1635 Fragaria x ananassa
FAN18G0527 Fragaria x ananassa
FAN18G1754 Fragaria x ananassa
FvH4_5g04530 Fragaria vesca
FvH4_7g16310 Fragaria vesca
Glyma.07G193700 Glycine max
Glyma.07G235200 Glycine max
Glyma.13G182900 Glycine max
Gohir.A02G101200 Gossypium hirsutum
Gohir.A12G236250 Gossypium hirsutum
Gohir.A12G236300 Gossypium hirsutum
Gohir.A12G242501 Gossypium hirsutum
Gohir.D03G083100 Gossypium hirsutum
Gohir.D09G043600 Gossypium hirsutum
Gohir.D11G024666 Gossypium hirsutum
Gohir.D11G024800 Gossypium hirsutum
Gohir.D12G237500 Gossypium hirsutum
Gorai.003G080300 Gossypium raimondii
Gorai.007G026400 Gossypium raimondii
Gorai.007G026600 Gossypium raimondii
Gorai.007G119000 Gossypium raimondii
Gorai.008G254200 Gossypium raimondii
Gorai.008G261000 Gossypium raimondii
GSVIVG01019529001 Vitis vinifera
HanXRQChr17g0535271 Helianthus annuus
Haze_04372 Corylus avellana
Hma1.2p1_0359F.1_g135260 Hydrangea macrophylla
Hma1.2p1_1746F.1_g300330 Hydrangea macrophylla
Hma1.2p1_1746F.1_g300340 Hydrangea macrophylla
Hma1.2p1_1746F.1_g300393 Hydrangea macrophylla
Hma1.2p1_1746F.1_g300401 Hydrangea macrophylla
HPP92_015099 Vanilla planifolia
HPP92_015100 Vanilla planifolia
HPP92_021112 Vanilla planifolia
Hund14222 Selenicereus undatus
Hund27202 Selenicereus undatus
Lalb_Chr20g0108181 Lupinus albus
Lalb_Chr25g0283571 Lupinus albus
Lalb_Chr25g0283581 Lupinus albus
Lj2A168T57 Lonicera japonica
Lj2g0019811 Lotus japonicus
Lj2g0022324 Lotus japonicus
Lj8A208G55 Lonicera japonica
Lsat_1_v5_gn_3_10601 Lactuca sativa
Lsat_1_v5_gn_3_24221 Lactuca sativa
Lsat_1_v5_gn_3_84861 Lactuca sativa
Lsat_1_v5_gn_4_149661 Lactuca sativa
Lsat_1_v5_gn_4_98980 Lactuca sativa
Lsat_1_v5_gn_5_111180 Lactuca sativa
Lsat_1_v5_gn_7_95981 Lactuca sativa
Lsat_1_v5_gn_8_149320 Lactuca sativa
Lsat_1_v5_gn_9_110840 Lactuca sativa
Manes.12G013800 Manihot esculenta
Mapoly0032s0093 Marchantia polymorpha
MBI06_g08461_MAGBIO Magnolia biondii
MBI07_g23927_MAGBIO Magnolia biondii
MCO09G623 Micromonas commoda
MD06G1106300 Malus domestica
MD07G1148500 Malus domestica
Medtr4g089105 Medicago truncatula
Medtr4g107330 Medicago truncatula
MELO3C016291.2 Cucumis melo
Migut.A00644 Erythranthe guttata
Migut.E01249 Erythranthe guttata
Migut.E01250 Erythranthe guttata
Migut.E01251 Erythranthe guttata
MSTRG.11925 Avicennia marina
MSTRG.13884 Avicennia marina
Nitab4.5_0001231g0130 Nicotiana tabacum
Nitab4.5_0002944g0010 Nicotiana tabacum
Nitab4.5_0007367g0020 Nicotiana tabacum
Nitab4.5_0007521g0030 Nicotiana tabacum
Nn1g04476 Nelumbo nucifera
Oeu009958.1 Olea europaea
Oeu034335.1 Olea europaea
Oeu063528.2 Olea europaea
Os03g0116000 Oryza sativa ssp. japonica
Os10g0521300 Oryza sativa ssp. japonica
Peaxi162Scf00074g00928 Petunia axillaris
Peaxi162Scf00102g01756 Petunia axillaris
PGR042G1530 Punica granatum
PGR042G2044 Punica granatum
PGR042G3133 Punica granatum
PGSC0003DMG400005839 Solanum tuberosum
Phvul.002G225801 Phaseolus vulgaris
Phvul.006G016400 Phaseolus vulgaris
Potri.001G091800 Populus trichocarpa
Potri.003G139800 Populus trichocarpa
Potri.006G073000 Populus trichocarpa
Potri.018G140100 Populus trichocarpa
Pp3c11_26830 Physcomitrium patens
PRCOL_00001986 Prasinoderma coloniale
Prupe.2G186800 Prunus persica
Prupe.2G187000 Prunus persica
Prupe.5G118500 Prunus persica
Psat0s3860g0040 Pisum sativum
Psat0s3860g0080 Pisum sativum
Psat4g003840 Pisum sativum
Psat7g111880 Pisum sativum
Psat7g112000 Pisum sativum
PSO063G5717 Papaver somniferum
PSO135G0671 Papaver somniferum
PSO170G3987 Papaver somniferum
PSO384G4601 Papaver somniferum
QL02p030669 Quercus lobata
RcHm_v2.0_Chr1g0359321 Rosa chinensis
RcHm_v2.0_Chr1g0378431 Rosa chinensis
RcHm_v2.0_Chr7g0194921 Rosa chinensis
Rhsim07G0082400 Rhododendron simsii
Sabra01G0068200 Salix brachista
Sabra06G0054400 Salix brachista
Sabra18G0114400 Salix brachista
SalBow1G0779 Salvia bowleyana
SalBow1G1418 Salvia bowleyana
SalBow1G4018 Salvia bowleyana
SalBow1G7571 Salvia bowleyana
SalBow1G8550 Salvia bowleyana
SalBow8G0465 Salvia bowleyana
Sc01g0010300 Simmondsia chinensis
Sc23g0002130 Simmondsia chinensis
Sed0014582 Sechium edule
Sed0023168 Sechium edule
SEGI_15079 Sequoiadendron giganteum
SEGI_19343 Sequoiadendron giganteum
SGA_v2.0_scaffold144G35856 Striga asiatica
SHI06993 Sapria himalayana
SMO367G0818 Selaginella moellendorffii
Solyc08g008320.3 Solanum lycopersicum
Solyc08g082290.4 Solanum lycopersicum
Solyc08g082300.3 Solanum lycopersicum
Sopen08g004180 Solanum pennellii
Sopen08g030560 Solanum pennellii
Sp2g25220 Schrenkiella parvula
Sp4g28470 Schrenkiella parvula
TAR375G0429 Trochodendron aralioides
TAR629G0459 Trochodendron aralioides
TAR629G2237 Trochodendron aralioides
TAR629G2459 Trochodendron aralioides
THA.LOC104817347 Tarenaya hassleriana
THA.LOC104817351 Tarenaya hassleriana
THA.LOC104817352 Tarenaya hassleriana
THA.LOC104817353 Tarenaya hassleriana
THA.LOC104817354 Tarenaya hassleriana
THA.LOC104817358 Tarenaya hassleriana
THA.LOC104821365 Tarenaya hassleriana
THA.LOC104821366 Tarenaya hassleriana
THA.LOC104821813 Tarenaya hassleriana
THA.LOC104821823 Tarenaya hassleriana
THA.LOC104823804 Tarenaya hassleriana
THA.LOC104827625 Tarenaya hassleriana
Thecc.01G343600 Theobroma cacao
Thecc.01G343700 Theobroma cacao
Thecc.03G297400 Theobroma cacao
Thhalv10001727m.g Eutrema salsugineum
Thhalv10004275m.g Eutrema salsugineum
TPR.G11293 Trifolium pratense
TPR.G12131 Trifolium pratense
TPR.G38405 Trifolium pratense
TWI81G0556 Tripterygium wilfordii
unitig_32.g11617 Utricularia gibba
unitig_32.g11620 Utricularia gibba
unitig_32.g11621 Utricularia gibba
vmacro12411 Vaccinium macrocarpon
vmacro13898 Vaccinium macrocarpon
VMungo0251G0742 Vigna mungo
Zm00001eb001070 Zea mays
Zm00001eb021300 Zea mays

User provided reference genes

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