Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p25670 Brassica napus
A05p01310 Brassica napus
A08p09600 Brassica napus
Actinidia04248 Actinidia chinensis
Actinidia38701 Actinidia chinensis
AL4G45830 Arabidopsis lyrata
AL4G45850 Arabidopsis lyrata
AL4G45870 Arabidopsis lyrata
AL4G45890 Arabidopsis lyrata
AL7G43990 Arabidopsis lyrata
Aqoxy6G00792 Aquilegia oxysepala
Aqoxy6G02828 Aquilegia oxysepala
Aqoxy7G03523 Aquilegia oxysepala
Aqoxy7G03526 Aquilegia oxysepala
Aqoxy7G03527 Aquilegia oxysepala
Aqoxy7G03977 Aquilegia oxysepala
AT2G46490 Arabidopsis thaliana
AT5G35110 Arabidopsis thaliana
ATR0629G115 Amborella trichopoda
Atru.chr7.210 Acer truncatum
Atru.chr7.219 Acer truncatum
AUR62011250 Chenopodium quinoa
AUR62041454 Chenopodium quinoa
BcaB01g03214 Brassica carinata
BcaB04g18061 Brassica carinata
BcaC01g05064 Brassica carinata
BcaC01g05065 Brassica carinata
BcaC02g12525 Brassica carinata
BcaC07g37675 Brassica carinata
BcaNung05602 Brassica carinata
BolC3t15412H Brassica oleracea
BolC4t21798H Brassica oleracea
BolC8t48047H Brassica oleracea
BraA03t11782Z Brassica rapa
BraA05t19129Z Brassica rapa
BraA08t32957Z Brassica rapa
C03p30620 Brassica napus
C04p01440 Brassica napus
CAN.G518.9 Capsicum annuum
CANSAT11G0551 Cannabis sativa
CANSAT11G1356 Cannabis sativa
CARHR141790 Cardamine hirsuta
CARHR217180 Cardamine hirsuta
Carub.0004s2917 Capsella rubella
Carub.0007s3090 Capsella rubella
Ca_13603_v3 Cicer arietinum L.
Ca_30444_v3 Cicer arietinum L.
Cfa020885 Carpinus fangiana
Cfa020886 Carpinus fangiana
Ciclev10009990m.g Citrus clementina
Ciclev10010215m.g Citrus clementina
Ciclev10010646m.g Citrus clementina
CiPaw.15G181200 Carya illinoinensis
CiPaw.15G181400 Carya illinoinensis
CiPaw.16G117500 Carya illinoinensis
ClCG02G017270 Citrullus lanatus
ClCG06G012060 Citrullus lanatus
COL.COLO4_24089 Corchorus olitorius
COL.COLO4_24090 Corchorus olitorius
COL.COLO4_24095 Corchorus olitorius
COL.COLO4_24097 Corchorus olitorius
Cpa.g.sc46.89 Carica papaya
Cpa.g.sc46.90 Carica papaya
CsaV3_1G028520 Cucumis sativus L.
CsaV3_1G028530 Cucumis sativus L.
CSS0042018 Camellia sinensis var. sinensis
CSS0043235 Camellia sinensis var. sinensis
DCAR_014925 Daucus carota
DCAR_014926 Daucus carota
DCAR_014927 Daucus carota
DCAR_014928 Daucus carota
DCAR_014929 Daucus carota
DCAR_014930 Daucus carota
DCAR_017763 Daucus carota
DCAR_020908 Daucus carota
Dinv41421 Davidia involucrata
Dinv43189 Davidia involucrata
Duzib150G1435 Durio zibethinus
Duzib168G2034 Durio zibethinus
Duzib187G0257 Durio zibethinus
ECA234G0124 Erigeron canadensis
ECA236G2080 Erigeron canadensis
ECA240G4705 Erigeron canadensis
EL10Ac8g18812 Beta vulgaris
Eucgr.C00430 Eucalyptus grandis
Eucgr.C00431 Eucalyptus grandis
Eucgr.C00432 Eucalyptus grandis
Eucgr.C00433 Eucalyptus grandis
FAN19G0716 Fragaria x ananassa
FAN19G2591 Fragaria x ananassa
FAN19G2875 Fragaria x ananassa
FAN23G0828 Fragaria x ananassa
FAN23G1547 Fragaria x ananassa
FAN23G1691 Fragaria x ananassa
FAN26G0066 Fragaria x ananassa
FAN26G1319 Fragaria x ananassa
FAN26G2245 Fragaria x ananassa
FAN28G1283 Fragaria x ananassa
FAN28G2220 Fragaria x ananassa
FAN28G2256 Fragaria x ananassa
FvH4_1g01610 Fragaria vesca
FvH4_1g01620 Fragaria vesca
FvH4_1g01630 Fragaria vesca
FvH4_1g01640 Fragaria vesca
FvH4_1g01650 Fragaria vesca
FvH4_1g01670 Fragaria vesca
FvH4_1g01700 Fragaria vesca
Glyma.09G094900 Glycine max
Glyma.13G157000 Glycine max
Glyma.13G157100 Glycine max
Glyma.15G202600 Glycine max
Glyma.17G104600 Glycine max
Glyma.17G104700 Glycine max
Gohir.A06G049100 Gossypium hirsutum
Gohir.A06G049200 Gossypium hirsutum
Gohir.A06G049366 Gossypium hirsutum
Gohir.A06G049449 Gossypium hirsutum
Gohir.A06G049615 Gossypium hirsutum
Gohir.A06G049700 Gossypium hirsutum
Gohir.A08G237300 Gossypium hirsutum
Gohir.A13G203300 Gossypium hirsutum
Gohir.A13G203400 Gossypium hirsutum
Gohir.D06G048766 Gossypium hirsutum
Gohir.D06G048800 Gossypium hirsutum
Gohir.D06G048866 Gossypium hirsutum
Gohir.D06G048900 Gossypium hirsutum
Gohir.D06G048932 Gossypium hirsutum
Gohir.D06G049025 Gossypium hirsutum
Gohir.D06G049050 Gossypium hirsutum
Gohir.D06G049075 Gossypium hirsutum
Gohir.D08G257900 Gossypium hirsutum
Gohir.D13G208600 Gossypium hirsutum
Gohir.D13G208700 Gossypium hirsutum
Gorai.004G275000 Gossypium raimondii
Gorai.010G055000 Gossypium raimondii
Gorai.010G055100 Gossypium raimondii
Gorai.010G055300 Gossypium raimondii
Gorai.010G055400 Gossypium raimondii
Gorai.010G055600 Gossypium raimondii
Gorai.010G055700 Gossypium raimondii
Gorai.010G055800 Gossypium raimondii
Gorai.013G237700 Gossypium raimondii
Gorai.013G237800 Gossypium raimondii
HanXRQChr03g0064541 Helianthus annuus
HanXRQChr03g0064551 Helianthus annuus
HanXRQChr05g0143211 Helianthus annuus
HanXRQChr06g0182051 Helianthus annuus
HanXRQChr09g0243231 Helianthus annuus
Haze_18941 Corylus avellana
Haze_19315 Corylus avellana
Hma1.2p1_0182F.1_g080520 Hydrangea macrophylla
Hma1.2p1_0182F.1_g080530 Hydrangea macrophylla
Hma1.2p1_0182F.1_g080570 Hydrangea macrophylla
Hma1.2p1_1784F.1_g302180 Hydrangea macrophylla
Hma1.2p1_2402F.1_g321405 Hydrangea macrophylla
HPP92_010439 Vanilla planifolia
HPP92_017503 Vanilla planifolia
Lalb_Chr07g0179531 Lupinus albus
Lalb_Chr08g0233841 Lupinus albus
Lalb_Chr11g0072841 Lupinus albus
Lalb_Chr13g0301181 Lupinus albus
Lalb_Chr23g0275801 Lupinus albus
Lj5g0000889 Lotus japonicus
Lsat_1_v5_gn_7_47800 Lactuca sativa
Lsat_1_v5_gn_7_47820 Lactuca sativa
Lsat_1_v5_gn_8_60440 Lactuca sativa
Lsat_1_v5_gn_8_60480 Lactuca sativa
Manes.06G041100 Manihot esculenta
Manes.14G139050 Manihot esculenta
Manes.14G139301 Manihot esculenta
Manes.14G139400 Manihot esculenta
MBI14_g15652_MAGBIO Magnolia biondii
MBI15_g31410_MAGBIO Magnolia biondii
MD02G1012800 Malus domestica
MD15G1158600 Malus domestica
MD15G1158700 Malus domestica
MD15G1158800 Malus domestica
MD15G1158900 Malus domestica
MD15G1159000 Malus domestica
MD15G1159200 Malus domestica
MD15G1159300 Malus domestica
MD15G1159500 Malus domestica
Medtr2g461270 Medicago truncatula
Medtr4g116620 Medicago truncatula
Medtr4g116640 Medicago truncatula
MELO3C004444.2 Cucumis melo
MELO3C010261.2 Cucumis melo
Migut.J01277 Erythranthe guttata
Migut.K00368 Erythranthe guttata
Migut.K00369 Erythranthe guttata
Migut.K00370 Erythranthe guttata
Migut.K00371 Erythranthe guttata
Migut.K00372 Erythranthe guttata
Migut.K00373 Erythranthe guttata
Migut.K00374 Erythranthe guttata
Nitab4.5_0001021g0010 Nicotiana tabacum
Nitab4.5_0001021g0030 Nicotiana tabacum
Nitab4.5_0001151g0070 Nicotiana tabacum
Nitab4.5_0001151g0160 Nicotiana tabacum
Nitab4.5_0001751g0020 Nicotiana tabacum
Nitab4.5_0005330g0060 Nicotiana tabacum
Nitab4.5_0005384g0020 Nicotiana tabacum
Nn2g12255 Nelumbo nucifera
Nn2g12256 Nelumbo nucifera
Nn8g39724 Nelumbo nucifera
Nn8g39725 Nelumbo nucifera
Oeu026098.1 Olea europaea
Oeu038253.1 Olea europaea
Oeu040780.1 Olea europaea
Oeu040786.1 Olea europaea
Oeu052182.1 Olea europaea
Oeu061127.1 Olea europaea
Peaxi162Scf00177g00073 Petunia axillaris
Peaxi162Scf00347g00003 Petunia axillaris
Peaxi162Scf00347g00009 Petunia axillaris
Peaxi162Scf00347g00011 Petunia axillaris
Peaxi162Scf00347g00017 Petunia axillaris
Peaxi162Scf00347g00021 Petunia axillaris
PGR102G1132 Punica granatum
PGR142G0643 Punica granatum
PGSC0003DMG400030739 Solanum tuberosum
PGSC0003DMG400030741 Solanum tuberosum
PGSC0003DMG400030742 Solanum tuberosum
PGSC0003DMG400030749 Solanum tuberosum
PGSC0003DMG401007888 Solanum tuberosum
Phvul.003G175000 Phaseolus vulgaris
Phvul.003G175100 Phaseolus vulgaris
Phvul.009G209300 Phaseolus vulgaris
Potri.006G189600 Populus trichocarpa
Potri.006G189700 Populus trichocarpa
Potri.018G113700 Populus trichocarpa
Potri.018G113901 Populus trichocarpa
Prupe.1G525100 Prunus persica
Prupe.7G253800 Prunus persica
Prupe.7G253900 Prunus persica
Prupe.7G254000 Prunus persica
Prupe.7G254100 Prunus persica
Prupe.7G254200 Prunus persica
Prupe.7G254300 Prunus persica
Prupe.7G254400 Prunus persica
Prupe.7G254500 Prunus persica
Psat0s4009g0080 Pisum sativum
PSO832G3277 Papaver somniferum
QL02p091368 Quercus lobata
QL02p091378 Quercus lobata
QL02p091382 Quercus lobata
RcHm_v2.0_Chr2g0086491 Rosa chinensis
RcHm_v2.0_Chr2g0086561 Rosa chinensis
RcHm_v2.0_Chr2g0086581 Rosa chinensis
RcHm_v2.0_Chr2g0086591 Rosa chinensis
RcHm_v2.0_Chr2g0086601 Rosa chinensis
RcHm_v2.0_Chr2g0086611 Rosa chinensis
RcHm_v2.0_Chr2g0086641 Rosa chinensis
Sabra06G0145800 Salix brachista
Sabra18G0096600 Salix brachista
Sabra18G0096700 Salix brachista
SalBow1G0319 Salvia bowleyana
Sc14g0000090 Simmondsia chinensis
Sed0001206 Sechium edule
Sed0002205 Sechium edule
Sed0003088 Sechium edule
Sed0005811 Sechium edule
Sed0006817 Sechium edule
Solyc07g007050.1 Solanum lycopersicum
Solyc07g007070.1 Solanum lycopersicum
Solyc07g007080.1 Solanum lycopersicum
Solyc07g007100.1 Solanum lycopersicum
Solyc12g010400.2 Solanum lycopersicum
Sopen07g003120 Solanum pennellii
Sopen12g005420 Solanum pennellii
Sp4g28490 Schrenkiella parvula
Sp7g07240 Schrenkiella parvula
TAR626G1664 Trochodendron aralioides
THA.LOC104808924 Tarenaya hassleriana
THA.LOC104815397 Tarenaya hassleriana
THA.LOC104826568 Tarenaya hassleriana
Thecc.09G142200 Theobroma cacao
Thecc.09G142300 Theobroma cacao
Thhalv10005650m.g Eutrema salsugineum
TPR.G15806 Trifolium pratense
TPR.G22803 Trifolium pratense
TWI34G1223 Tripterygium wilfordii
unitig_748.g7183 Utricularia gibba
VMungo1309G2977 Vigna mungo

User provided reference genes

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