Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08100 Brassica napus
A07p45330 Brassica napus
A09p55500 Brassica napus
Aa31LG4G590 Aethionema arabicum
Aa31LG4G9930 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1290 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.1296 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_117.1318 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.487 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2276 Anthoceros agrestis
Actinidia14645 Actinidia chinensis
Actinidia16009 Actinidia chinensis
Ah.03g143840 Amaranthus hybridus
Ah.08g219110 Amaranthus hybridus
AL2G41190 Arabidopsis lyrata
AL4G17280 Arabidopsis lyrata
AL7G51770 Arabidopsis lyrata
Aqoxy1G03626 Aquilegia oxysepala
Aqoxy7G01804 Aquilegia oxysepala
Aqoxy7G01952 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B4MRFB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U52AAS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WPDD67 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YICS0E Arachis hypogaea
AT1G80310 Arabidopsis thaliana
AT2G25680 Arabidopsis thaliana
ATR0824G251 Amborella trichopoda
Atru.chr1.3168 Acer truncatum
Atru.chr7.2315 Acer truncatum
AUR62003811 Chenopodium quinoa
BcaB02g08694 Brassica carinata
BcaB08g35207 Brassica carinata
BcaC07g40850 Brassica carinata
BcaC08g47578 Brassica carinata
BcaC09g51780 Brassica carinata
BcaNung06649 Brassica carinata
BcaNung06650 Brassica carinata
BolC1t00898H Brassica oleracea
BolC6t40430H Brassica oleracea
BolC8t51420H Brassica oleracea
BraA01t00756Z Brassica rapa
BraA07t32037Z Brassica rapa
BraA09t40952Z Brassica rapa
C01p09070 Brassica napus
C06p54180 Brassica napus
C08p38480 Brassica napus
CAN.G324.1 Capsicum annuum
CAN.G438.97 Capsicum annuum
CAN.G588.48 Capsicum annuum
CANSAT54G0703 Cannabis sativa
CARHR115570 Cardamine hirsuta
CARHR232180 Cardamine hirsuta
CARHR291220 Cardamine hirsuta
Carub.0002s0429 Capsella rubella
Carub.0004s0547 Capsella rubella
Ca_07171_v3 Cicer arietinum L.
Ca_12902_v3 Cicer arietinum L.
Ca_12904_v3 Cicer arietinum L.
Ca_15692_v3 Cicer arietinum L.
Cc04_g03750 Coffea canephora
Cc08_g08220 Coffea canephora
Cc08_g08230 Coffea canephora
CDE06G1985 Ceratophyllum demersum
CDE07G0769 Ceratophyllum demersum
Cfa000404 Carpinus fangiana
Cfa002033 Carpinus fangiana
Cfa009401 Carpinus fangiana
Cfa013222 Carpinus fangiana
Cfa025706 Carpinus fangiana
Ciclev10010241m.g Citrus clementina
Ciclev10025542m.g Citrus clementina
CiPaw.01G242400 Carya illinoinensis
CiPaw.07G216900 Carya illinoinensis
CiPaw.08G016400 Carya illinoinensis
ClCG08G012850 Citrullus lanatus
ClCG09G002510 Citrullus lanatus
COL.COLO4_12856 Corchorus olitorius
COL.COLO4_24074 Corchorus olitorius
Cpa.g.sc10.199 Carica papaya
Cpa.g.sc91.3 Carica papaya
Cre04.g214050 Chlamydomonas reinhardtii
CsaV3_2G031590 Cucumis sativus L.
CsaV3_7G032820 Cucumis sativus L.
CSS0006489 Camellia sinensis var. sinensis
CSS0038238 Camellia sinensis var. sinensis
CSS0042482 Camellia sinensis var. sinensis
DCAR_002843 Daucus carota
DCAR_006259 Daucus carota
DCAR_027722 Daucus carota
Dinv30221 Davidia involucrata
Dinv30222 Davidia involucrata
Dinv30223 Davidia involucrata
Duzib150G1317 Durio zibethinus
Duzib168G1154 Durio zibethinus
Duzib235G0902 Durio zibethinus
ECA232G5015 Erigeron canadensis
ECA247G2652 Erigeron canadensis
EL10Ac4g09281 Beta vulgaris
EL10Ac6g15127 Beta vulgaris
Eucgr.A01693 Eucalyptus grandis
Eucgr.A01694 Eucalyptus grandis
Eucgr.A01695 Eucalyptus grandis
Eucgr.A01696 Eucalyptus grandis
Eucgr.A01699 Eucalyptus grandis
Eucgr.C02871 Eucalyptus grandis
Eucgr.C02872 Eucalyptus grandis
Eucgr.J03028 Eucalyptus grandis
Eucgr.L02822 Eucalyptus grandis
FAN15G3673 Fragaria x ananassa
FAN20G1120 Fragaria x ananassa
FAN20G3014 Fragaria x ananassa
FAN24G2849 Fragaria x ananassa
FAN27G2609 Fragaria x ananassa
FvH4_2g30230 Fragaria vesca
Glyma.04G073000 Glycine max
Glyma.06G074100 Glycine max
Glyma.08G208700 Glycine max
Glyma.14G130000 Glycine max
Glyma.17G203000 Glycine max
Glyma.17G203200 Glycine max
Glyma.17G203450 Glycine max
Glyma.17G203500 Glycine max
Gohir.A06G048400 Gossypium hirsutum
Gohir.A06G048500 Gossypium hirsutum
Gohir.A07G025900 Gossypium hirsutum
Gohir.A07G025950 Gossypium hirsutum
Gohir.A10G078000 Gossypium hirsutum
Gohir.D06G048400 Gossypium hirsutum
Gohir.D07G029700 Gossypium hirsutum
Gohir.D07G029800 Gossypium hirsutum
Gohir.D10G073600 Gossypium hirsutum
Gorai.001G030900 Gossypium raimondii
Gorai.001G031000 Gossypium raimondii
Gorai.010G054200 Gossypium raimondii
Gorai.010G054300 Gossypium raimondii
Gorai.011G079400 Gossypium raimondii
GSVIVG01017206001 Vitis vinifera
GSVIVG01035740001 Vitis vinifera
HanXRQChr03g0093961 Helianthus annuus
HanXRQChr16g0500611 Helianthus annuus
Haze_16485 Corylus avellana
Haze_21634 Corylus avellana
Haze_21637 Corylus avellana
Haze_21642 Corylus avellana
Hma1.2p1_0140F.1_g063860 Hydrangea macrophylla
Hma1.2p1_0140F.1_g063870 Hydrangea macrophylla
Hma1.2p1_0175F.1_g077326 Hydrangea macrophylla
Hma1.2p1_0317F.1_g123320 Hydrangea macrophylla
Hma1.2p1_3026F.1_g331810 Hydrangea macrophylla
HPP92_009791 Vanilla planifolia
Lalb_Chr23g0268981 Lupinus albus
Lalb_Chr24g0402341 Lupinus albus
Lalb_Chr25g0279561 Lupinus albus
Lj1g0009540 Lotus japonicus
Lj3g0015754 Lotus japonicus
Lj3g0022358 Lotus japonicus
Lj3g0022370 Lotus japonicus
Lj5C65T9 Lonicera japonica
Lj8A335T44 Lonicera japonica
Lj8C608T4 Lonicera japonica
Lj8C608T5 Lonicera japonica
Lj8P609T19 Lonicera japonica
Lsat_1_v5_gn_4_103980 Lactuca sativa
Lsat_1_v5_gn_4_66500 Lactuca sativa
Manes.11G049600 Manihot esculenta
Manes.11G049700 Manihot esculenta
Mapoly0001s0047 Marchantia polymorpha
Mapoly0098s0042 Marchantia polymorpha
Mapoly0130s0020 Marchantia polymorpha
Mapoly0132s0021 Marchantia polymorpha
MBI01_g16631_MAGBIO Magnolia biondii
MBI01_g19674_MAGBIO Magnolia biondii
MBI04_g43366_MAGBIO Magnolia biondii
MBI04_g43367_MAGBIO Magnolia biondii
MCO15G177 Micromonas commoda
MD08G1135400 Malus domestica
Medtr1g010210 Medicago truncatula
Medtr1g010270 Medicago truncatula
Medtr3g108190 Medicago truncatula
Medtr3g464210 Medicago truncatula
Medtr4g011600 Medicago truncatula
MELO3C011210.2 Cucumis melo
MELO3C023385.2 Cucumis melo
Migut.A00264 Erythranthe guttata
Migut.D01041 Erythranthe guttata
Migut.L00408 Erythranthe guttata
MSTRG.25881 Avicennia marina
MSTRG.4724 Avicennia marina
Nitab4.5_0000202g0160 Nicotiana tabacum
Nitab4.5_0000216g0090 Nicotiana tabacum
Nitab4.5_0000410g0320 Nicotiana tabacum
Nitab4.5_0004817g0020 Nicotiana tabacum
Nitab4.5_0005313g0040 Nicotiana tabacum
Nn1g07804 Nelumbo nucifera
Nn1g07809 Nelumbo nucifera
Nn2g11802 Nelumbo nucifera
Nn3g19942 Nelumbo nucifera
Nn8g39333 Nelumbo nucifera
Oeu001147.3 Olea europaea
Oeu045169.1 Olea europaea
Os01g0645900 Oryza sativa ssp. japonica
Os08g0101500 Oryza sativa ssp. japonica
Peaxi162Scf00003g03332 Petunia axillaris
Peaxi162Scf00015g00058 Petunia axillaris
Peaxi162Scf01093g00002 Petunia axillaris
PGR031G1478 Punica granatum
PGR044G1818 Punica granatum
PGSC0003DMG400005760 Solanum tuberosum
PGSC0003DMG400011000 Solanum tuberosum
Phvul.001G056100 Phaseolus vulgaris
Phvul.001G056300 Phaseolus vulgaris
Phvul.009G098800 Phaseolus vulgaris
Phvul.010G152700 Phaseolus vulgaris
Potri.006G245900 Populus trichocarpa
Potri.006G246000 Populus trichocarpa
Pp3c19_16800 Physcomitrium patens
Pp3c2_20160 Physcomitrium patens
PRCOL_00000061 Prasinoderma coloniale
Prupe.1G465500 Prunus persica
Prupe.3G077200 Prunus persica
Psat0s2694g0160 Pisum sativum
Psat4g172720 Pisum sativum
Psat5g026520 Pisum sativum
Psat6g031200 Pisum sativum
Psat6g031280 Pisum sativum
Psat7g150560 Pisum sativum
PSO063G4464 Papaver somniferum
PSO135G0873 Papaver somniferum
PSO386G0049 Papaver somniferum
PSO724G0501 Papaver somniferum
PSO782G1481 Papaver somniferum
QL05p026809 Quercus lobata
QL12p031132 Quercus lobata
QL12p031162 Quercus lobata
RcHm_v2.0_Chr2g0137081 Rosa chinensis
RcHm_v2.0_Chr4g0397011 Rosa chinensis
RcHm_v2.0_Chr4g0401431 Rosa chinensis
RcHm_v2.0_Chr6g0312651 Rosa chinensis
Rhsim07G0121400 Rhododendron simsii
Rhsim07G0121700 Rhododendron simsii
Rhsim12G0195100 Rhododendron simsii
RhsimUnG0009500 Rhododendron simsii
Sabra06G0192400 Salix brachista
Sabra06G0192500 Salix brachista
Sabra18G0035900 Salix brachista
SalBow2G2293 Salvia bowleyana
SalBow4G0941 Salvia bowleyana
Sc09g0008890 Simmondsia chinensis
Sed0007547 Sechium edule
Sed0017158 Sechium edule
SEGI_02493 Sequoiadendron giganteum
SEGI_21023 Sequoiadendron giganteum
SGA_v2.0_scaffold279G46823 Striga asiatica
SGA_v2.0_scaffold27G11506 Striga asiatica
SMO169G0098 Selaginella moellendorffii
Solyc03g119930.1 Solanum lycopersicum
Solyc10g084680.1 Solanum lycopersicum
Sopen03g038810 Solanum pennellii
Sopen10g034120 Solanum pennellii
Sp4g05290 Schrenkiella parvula
Sp5g35500 Schrenkiella parvula
TAR383G0042 Trochodendron aralioides
TAR625G1367 Trochodendron aralioides
THA.LOC104812482 Tarenaya hassleriana
THA.LOC104819892 Tarenaya hassleriana
Thecc.06G077800 Theobroma cacao
Thecc.09G143500 Theobroma cacao
Thhalv10000159m.g Eutrema salsugineum
Thhalv10019779m.g Eutrema salsugineum
TPR.G12399 Trifolium pratense
TPR.G19045 Trifolium pratense
TPR.G20088 Trifolium pratense
TPR.G20090 Trifolium pratense
TPR.G26529 Trifolium pratense
TPR.G38628 Trifolium pratense
TWI12G0048 Tripterygium wilfordii
TWI34G0774 Tripterygium wilfordii
vmacro05454 Vaccinium macrocarpon
vmacro05462 Vaccinium macrocarpon
VMungo0331G1867 Vigna mungo
VMungo0647G2073 Vigna mungo
VMungo0647G2270 Vigna mungo
VMungo1309G1893 Vigna mungo
Zm00001eb048790 Zea mays
Zm00001eb158530 Zea mays

User provided reference genes

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