Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Actinidia05102 Actinidia chinensis
Actinidia05103 Actinidia chinensis
Actinidia10727 Actinidia chinensis
Actinidia31625 Actinidia chinensis
Actinidia36946 Actinidia chinensis
Aqoxy1G01863 Aquilegia oxysepala
Aqoxy1G03443 Aquilegia oxysepala
Aqoxy1G03519 Aquilegia oxysepala
Aqoxy1G03522 Aquilegia oxysepala
Aqoxy1G03524 Aquilegia oxysepala
Aqoxy1G03950 Aquilegia oxysepala
Aqoxy2G01046 Aquilegia oxysepala
Aqoxy2G01085 Aquilegia oxysepala
Aqoxy4G01389 Aquilegia oxysepala
Aqoxy4G01769 Aquilegia oxysepala
Aqoxy4G01846 Aquilegia oxysepala
Aqoxy4G02412 Aquilegia oxysepala
Aqoxy4G02418 Aquilegia oxysepala
Aqoxy4G02591 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LE699N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LR8YZ7 Arachis hypogaea
ATR0752G044 Amborella trichopoda
ATR0752G051 Amborella trichopoda
ATR0752G187 Amborella trichopoda
Atru.chr10.2188 Acer truncatum
Atru.chr10.2189 Acer truncatum
Atru.chr12.178 Acer truncatum
Atru.chr12.180 Acer truncatum
Atru.chr13.601 Acer truncatum
Atru.chr13.602 Acer truncatum
Atru.chr2.3375 Acer truncatum
Atru.chr2.3376 Acer truncatum
CAN.G337.117 Capsicum annuum
CAN.G337.119 Capsicum annuum
CANSAT01G2397 Cannabis sativa
Ca_06311_v3 Cicer arietinum L.
Ca_15055_v3 Cicer arietinum L.
Cc05_g13610 Coffea canephora
Cfa020362 Carpinus fangiana
Cfa020363 Carpinus fangiana
Cfa020364 Carpinus fangiana
Cfa020365 Carpinus fangiana
Cfa020366 Carpinus fangiana
Cfa020367 Carpinus fangiana
Cfa020369 Carpinus fangiana
Cfa020370 Carpinus fangiana
Cfa021164 Carpinus fangiana
Ciclev10010640m.g Citrus clementina
Ciclev10018022m.g Citrus clementina
Ciclev10018288m.g Citrus clementina
CiPaw.11G188000 Carya illinoinensis
CiPaw.14G050600 Carya illinoinensis
ClCG05G014370 Citrullus lanatus
ClCG05G014390 Citrullus lanatus
COL.COLO4_09649 Corchorus olitorius
COL.COLO4_19352 Corchorus olitorius
COL.COLO4_19358 Corchorus olitorius
COL.COLO4_19359 Corchorus olitorius
COL.COLO4_31752 Corchorus olitorius
Cpa.g.sc13.216 Carica papaya
Cpa.g.sc97.20 Carica papaya
Cpa.g.sc97.24 Carica papaya
Cpa.g.sc97.25 Carica papaya
CsaV3_3G017740 Cucumis sativus L.
CsaV3_3G022960 Cucumis sativus L.
CSS0000761 Camellia sinensis var. sinensis
CSS0010125 Camellia sinensis var. sinensis
CSS0012867 Camellia sinensis var. sinensis
CSS0014486 Camellia sinensis var. sinensis
CSS0016245 Camellia sinensis var. sinensis
CSS0023709 Camellia sinensis var. sinensis
CSS0024810 Camellia sinensis var. sinensis
CSS0032236 Camellia sinensis var. sinensis
DCAR_002851 Daucus carota
Dinv20038 Davidia involucrata
Dinv34526 Davidia involucrata
Dinv40744 Davidia involucrata
Duzib268G0729 Durio zibethinus
ECA232G0728 Erigeron canadensis
ECA236G1067 Erigeron canadensis
ECA236G1749 Erigeron canadensis
ECA236G4034 Erigeron canadensis
ECA236G4136 Erigeron canadensis
ECA247G1534 Erigeron canadensis
Eucgr.F00548 Eucalyptus grandis
Eucgr.F00778 Eucalyptus grandis
Eucgr.F00785 Eucalyptus grandis
Eucgr.F00794 Eucalyptus grandis
Eucgr.F00796 Eucalyptus grandis
Eucgr.F00804 Eucalyptus grandis
Eucgr.F00805 Eucalyptus grandis
Eucgr.F00880 Eucalyptus grandis
Eucgr.F00881 Eucalyptus grandis
Eucgr.F00898 Eucalyptus grandis
Eucgr.K03446 Eucalyptus grandis
Eucgr.L01107 Eucalyptus grandis
Eucgr.L01108 Eucalyptus grandis
FAN03G0028 Fragaria x ananassa
FAN04G3105 Fragaria x ananassa
FAN06G3748 Fragaria x ananassa
FAN08G0726 Fragaria x ananassa
FAN10G1289 Fragaria x ananassa
FAN11G0846 Fragaria x ananassa
FAN11G1815 Fragaria x ananassa
FAN11G2109 Fragaria x ananassa
FAN11G3658 Fragaria x ananassa
FAN13G1595 Fragaria x ananassa
FAN16G3028 Fragaria x ananassa
FAN16G3152 Fragaria x ananassa
FAN18G3336 Fragaria x ananassa
FAN18G3592 Fragaria x ananassa
FAN21G1039 Fragaria x ananassa
FAN21G1487 Fragaria x ananassa
FAN21G1691 Fragaria x ananassa
FAN21G3405 Fragaria x ananassa
FAN25G0206 Fragaria x ananassa
FAN25G0457 Fragaria x ananassa
FAN25G0554 Fragaria x ananassa
FvH4_3g22430 Fragaria vesca
FvH4_3g22440 Fragaria vesca
FvH4_3g22470 Fragaria vesca
FvH4_3g40490 Fragaria vesca
FvH4_5g35780 Fragaria vesca
FvH4_7g25900 Fragaria vesca
Glyma.02G290000 Glycine max
Glyma.09G144300 Glycine max
Glyma.18G052400 Glycine max
Gohir.A01G078900 Gossypium hirsutum
Gohir.A06G179200 Gossypium hirsutum
Gohir.A10G013750 Gossypium hirsutum
Gohir.D01G066000 Gossypium hirsutum
Gohir.D06G186200 Gossypium hirsutum
Gohir.D10G013700 Gossypium hirsutum
Gorai.002G087900 Gossypium raimondii
Gorai.010G218500 Gossypium raimondii
Gorai.011G015500 Gossypium raimondii
GSVIVG01002375001 Vitis vinifera
GSVIVG01002376001 Vitis vinifera
GSVIVG01032686001 Vitis vinifera
GSVIVG01037622001 Vitis vinifera
GSVIVG01037624001 Vitis vinifera
GSVIVG01037625001 Vitis vinifera
HanXRQChr11g0338341 Helianthus annuus
HanXRQChr15g0471151 Helianthus annuus
HanXRQChr15g0471161 Helianthus annuus
HanXRQChr15g0471181 Helianthus annuus
HanXRQChr15g0471191 Helianthus annuus
HanXRQChr15g0471201 Helianthus annuus
HanXRQChr15g0471211 Helianthus annuus
Haze_09659 Corylus avellana
Haze_24469 Corylus avellana
Hma1.2p1_1222F.1_g268300 Hydrangea macrophylla
Hma1.2p1_1271F.1_g271700 Hydrangea macrophylla
Hma1.2p1_2030F.1_g311800 Hydrangea macrophylla
Lj1A119G24 Lonicera japonica
Lj1A966G37 Lonicera japonica
Lj2A1101T52 Lonicera japonica
Lj6g0006149 Lotus japonicus
LjContig00272g0005681 Lotus japonicus
LjContig00272g0008852 Lotus japonicus
LjContig00272g0011844 Lotus japonicus
Lsat_1_v5_gn_7_17561 Lactuca sativa
Lsat_1_v5_gn_7_17581 Lactuca sativa
Lsat_1_v5_gn_7_17601 Lactuca sativa
Manes.15G073000 Manihot esculenta
MBI03_g15600_MAGBIO Magnolia biondii
MBI03_g40026_MAGBIO Magnolia biondii
MBI15_g01590_MAGBIO Magnolia biondii
MBI15_g01591_MAGBIO Magnolia biondii
MBI15_g08959_MAGBIO Magnolia biondii
MBI15_g08960_MAGBIO Magnolia biondii
MBI15_g27670_MAGBIO Magnolia biondii
MBI18_g43122_MAGBIO Magnolia biondii
MD03G1051800 Malus domestica
MD03G1183000 Malus domestica
MD03G1204900 Malus domestica
MD03G1205100 Malus domestica
MD07G1233500 Malus domestica
MD11G1053900 Malus domestica
Medtr3g051230 Medicago truncatula
Medtr3g467130 Medicago truncatula
Medtr3g467140 Medicago truncatula
Medtr5g092150 Medicago truncatula
MELO3C018117.2 Cucumis melo
MELO3C020318.2 Cucumis melo
MELO3C031418.2 Cucumis melo
Migut.H01565 Erythranthe guttata
Migut.H01566 Erythranthe guttata
Migut.H01568 Erythranthe guttata
Migut.H01569 Erythranthe guttata
Migut.M01777 Erythranthe guttata
Nitab4.5_0001604g0130 Nicotiana tabacum
Nitab4.5_0001913g0090 Nicotiana tabacum
Nitab4.5_0011505g0010 Nicotiana tabacum
Nitab4.5_0011505g0020 Nicotiana tabacum
Oeu037357.1 Olea europaea
Oeu042931.1 Olea europaea
Oeu062592.1 Olea europaea
Os07g0517900 Oryza sativa ssp. japonica
Os07g0518100 Oryza sativa ssp. japonica
Os07g0518500 Oryza sativa ssp. japonica
Os07g0519100 Oryza sativa ssp. japonica
Os07g0519300 Oryza sativa ssp. japonica
Os07g0520100 Oryza sativa ssp. japonica
Os09g0380300 Oryza sativa ssp. japonica
Peaxi162Scf00964g00142 Petunia axillaris
Peaxi162Scf00964g00143 Petunia axillaris
PGR004G2337 Punica granatum
PGR031G2665 Punica granatum
PGSC0003DMG400022223 Solanum tuberosum
PGSC0003DMG400022224 Solanum tuberosum
Phvul.006G078600 Phaseolus vulgaris
Phvul.008G235000 Phaseolus vulgaris
Potri.001G425675 Populus trichocarpa
Potri.004G017633 Populus trichocarpa
Potri.004G017700 Populus trichocarpa
Potri.004G017800 Populus trichocarpa
Potri.011G001300 Populus trichocarpa
Potri.011G001401 Populus trichocarpa
Potri.011G001500 Populus trichocarpa
Potri.011G137750 Populus trichocarpa
Potri.011G137800 Populus trichocarpa
Potri.011G137950 Populus trichocarpa
Potri.012G115000 Populus trichocarpa
Potri.019G057901 Populus trichocarpa
Prupe.4G210900 Prunus persica
Prupe.4G211000 Prunus persica
Prupe.6G041200 Prunus persica
Psat2g013680 Pisum sativum
Psat2g013720 Pisum sativum
Psat5g148400 Pisum sativum
PSO017G3884 Papaver somniferum
PSO017G4803 Papaver somniferum
PSO170G2234 Papaver somniferum
PSO675G8685 Papaver somniferum
QL08p010722 Quercus lobata
QL08p011166 Quercus lobata
RcHm_v2.0_Chr1g0372211 Rosa chinensis
RcHm_v2.0_Chr5g0039101 Rosa chinensis
RcHm_v2.0_Chr5g0039121 Rosa chinensis
RcHm_v2.0_Chr5g0039131 Rosa chinensis
RcHm_v2.0_Chr5g0073161 Rosa chinensis
Rhsim13G0057800 Rhododendron simsii
Rhsim13G0059600 Rhododendron simsii
Rhsim13G0059700 Rhododendron simsii
RhsimUnG0251400 Rhododendron simsii
SalBow1G3549 Salvia bowleyana
Sed0003935 Sechium edule
Sed0017363 Sechium edule
SEGI_01440 Sequoiadendron giganteum
SEGI_06495 Sequoiadendron giganteum
SEGI_09434 Sequoiadendron giganteum
SEGI_20588 Sequoiadendron giganteum
SEGI_24092 Sequoiadendron giganteum
SEGI_29099 Sequoiadendron giganteum
SEGI_30524 Sequoiadendron giganteum
SEGI_31770 Sequoiadendron giganteum
SEGI_33175 Sequoiadendron giganteum
SEGI_34279 Sequoiadendron giganteum
SEGI_34469 Sequoiadendron giganteum
SEGI_40645 Sequoiadendron giganteum
SEGI_41074 Sequoiadendron giganteum
Solyc07g064450.4 Solanum lycopersicum
Sopen07g032650 Solanum pennellii
Sopen07g032660 Solanum pennellii
TAR623G0915 Trochodendron aralioides
TAR626G1790 Trochodendron aralioides
TAR627G0449 Trochodendron aralioides
TAR633G1060 Trochodendron aralioides
Thecc.06G218100 Theobroma cacao
Thecc.07G042600 Theobroma cacao
Thecc.10G181300 Theobroma cacao
TPR.G1197 Trifolium pratense
TPR.G1205 Trifolium pratense
TPR.G1218 Trifolium pratense
TPR.G1224 Trifolium pratense
TPR.G28807 Trifolium pratense
TWI39G0101 Tripterygium wilfordii
TWI39G0202 Tripterygium wilfordii
TWI39G0221 Tripterygium wilfordii
TWI39G0593 Tripterygium wilfordii
TWI39G1051 Tripterygium wilfordii
vmacro02878 Vaccinium macrocarpon
vmacro09725 Vaccinium macrocarpon
VMungo0540G2026 Vigna mungo
VMungo0647G0377 Vigna mungo
Zm00001eb106090 Zea mays
Zm00001eb166680 Zea mays
Zm00001eb225960 Zea mays

User provided reference genes

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