Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p14860 Brassica napus
A05p39600 Brassica napus
A05p39610 Brassica napus
A07p32060 Brassica napus
A07p34720 Brassica napus
A09p43950 Brassica napus
Aa31LG7G9160 Aethionema arabicum
Aa31sc88G80 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.147 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3441 Anthoceros agrestis
Actinidia01329 Actinidia chinensis
Actinidia19185 Actinidia chinensis
Ah.07g201070 Amaranthus hybridus
Ah.12g055560 Amaranthus hybridus
AL2G27140 Arabidopsis lyrata
AL5G31180 Arabidopsis lyrata
Aqoxy2G02906 Aquilegia oxysepala
Aqoxy6G01106 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.988I9X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BSFP8J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E7GDE8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HD9PWI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NK8PWK Arachis hypogaea
AT1G68310 Arabidopsis thaliana
AT3G09380 Arabidopsis thaliana
AT3G50845 Arabidopsis thaliana
ATR0733G085 Amborella trichopoda
ATR0829G046 Amborella trichopoda
Atru.chr12.1227 Acer truncatum
Atru.chr3.570 Acer truncatum
AUR62004049 Chenopodium quinoa
AUR62007363 Chenopodium quinoa
AUR62007564 Chenopodium quinoa
AUR62018625 Chenopodium quinoa
AUR62035653 Chenopodium quinoa
BcaB01g00574 Brassica carinata
BcaB01g00575 Brassica carinata
BcaB02g07593 Brassica carinata
BcaB03g15099 Brassica carinata
BcaB03g15102 Brassica carinata
BcaB03g15408 Brassica carinata
BcaB05g24362 Brassica carinata
BcaC03g14935 Brassica carinata
BcaC05g29669 Brassica carinata
BcaC07g39549 Brassica carinata
BcaC08g45982 Brassica carinata
BcaC08g46262 Brassica carinata
BcaC08g46264 Brassica carinata
BcaC08g46265 Brassica carinata
BcaC09g48081 Brassica carinata
BolC1t05454H Brassica oleracea
BolC2t08543H Brassica oleracea
BolC5t34513H Brassica oleracea
BolC6t38877H Brassica oleracea
BolC6t39257H Brassica oleracea
BolC8t50223H Brassica oleracea
BraA01t04299Z Brassica rapa
BraA02t06553Z Brassica rapa
BraA05t22741Z Brassica rapa
BraA05t22742Z Brassica rapa
BraA07t30836Z Brassica rapa
BraA09t39852Z Brassica rapa
C02p24310 Brassica napus
C05p58630 Brassica napus
C06p37740 Brassica napus
C06p41690 Brassica napus
C08p26050 Brassica napus
CAN.G773.30 Capsicum annuum
CAN.G874.29 Capsicum annuum
CANSAT01G1943 Cannabis sativa
CARHR046880 Cardamine hirsuta
CARHR060990 Cardamine hirsuta
CARHR083770 Cardamine hirsuta
CARHR160390 Cardamine hirsuta
Carub.0002s1480 Capsella rubella
Carub.0003s0849 Capsella rubella
Carub.0005s1723 Capsella rubella
Ca_24846_v3 Cicer arietinum L.
Ca_25162_v3 Cicer arietinum L.
CBR_g8582 Chara braunii
Cc07_g09510 Coffea canephora
Cc08_g03730 Coffea canephora
CDE11G1138 Ceratophyllum demersum
Cfa009034 Carpinus fangiana
Cfa012532 Carpinus fangiana
Ciclev10002744m.g Citrus clementina
Ciclev10027433m.g Citrus clementina
CiPaw.01G037800 Carya illinoinensis
CiPaw.12G069300 Carya illinoinensis
ClCG07G009210 Citrullus lanatus
ClCG09G011580 Citrullus lanatus
COL.COLO4_22083 Corchorus olitorius
COL.COLO4_36460 Corchorus olitorius
Cpa.g.sc49.70 Carica papaya
Cre11.g479700 Chlamydomonas reinhardtii
CsaV3_4G005030 Cucumis sativus L.
CSS0004410 Camellia sinensis var. sinensis
CSS0009442 Camellia sinensis var. sinensis
CSS0015281 Camellia sinensis var. sinensis
CSS0022027 Camellia sinensis var. sinensis
CSS0035166 Camellia sinensis var. sinensis
CSS0042614 Camellia sinensis var. sinensis
CSS0046028 Camellia sinensis var. sinensis
DCAR_011304 Daucus carota
DCAR_028251 Daucus carota
Dinv06919 Davidia involucrata
Dinv29016 Davidia involucrata
Dinv39985 Davidia involucrata
Duzib147G0060 Durio zibethinus
Duzib150G0350 Durio zibethinus
Duzib168G0037 Durio zibethinus
Duzib187G1657 Durio zibethinus
ECA238G1153 Erigeron canadensis
ECA246G1284 Erigeron canadensis
ECA246G1747 Erigeron canadensis
EL10Ac5g11998 Beta vulgaris
EL10Ac6g15564 Beta vulgaris
Eucgr.D02638 Eucalyptus grandis
Eucgr.I02444 Eucalyptus grandis
FAN04G1675 Fragaria x ananassa
FAN08G2712 Fragaria x ananassa
FAN13G2540 Fragaria x ananassa
FAN18G0490 Fragaria x ananassa
FAN18G3702 Fragaria x ananassa
FAN19G3136 Fragaria x ananassa
FAN23G0991 Fragaria x ananassa
FAN26G1254 Fragaria x ananassa
FAN28G2695 Fragaria x ananassa
FvH4_1g13320 Fragaria vesca
FvH4_5g23251 Fragaria vesca
Glyma.01G012300 Glycine max
Glyma.01G175900 Glycine max
Glyma.04G121601 Glycine max
Glyma.09G209300 Glycine max
Glyma.11G068200 Glycine max
Gohir.A02G165100 Gossypium hirsutum
Gohir.A07G123200 Gossypium hirsutum
Gohir.D03G014900 Gossypium hirsutum
Gohir.D07G127100 Gossypium hirsutum
Gorai.001G137200 Gossypium raimondii
Gorai.003G015200 Gossypium raimondii
GSVIVG01018962001 Vitis vinifera
GSVIVG01034035001 Vitis vinifera
HanXRQChr06g0172881 Helianthus annuus
HanXRQChr10g0278551 Helianthus annuus
HanXRQChr14g0441191 Helianthus annuus
Haze_08132 Corylus avellana
Haze_12063 Corylus avellana
Haze_15091 Corylus avellana
Haze_27665 Corylus avellana
Hma1.2p1_0224F.1_g094670 Hydrangea macrophylla
Hma1.2p1_1645F.1_g295380 Hydrangea macrophylla
Hma1.2p1_1866F.1_g305810 Hydrangea macrophylla
HPP92_001859 Vanilla planifolia
HPP92_001873 Vanilla planifolia
HPP92_007700 Vanilla planifolia
Hund13974 Selenicereus undatus
Hund14382 Selenicereus undatus
Hund30746 Selenicereus undatus
Lalb_Chr09g0325391 Lupinus albus
Lalb_Chr09g0325401 Lupinus albus
Lalb_Chr16g0377841 Lupinus albus
Lj2A761T3 Lonicera japonica
Lj2A761T4 Lonicera japonica
Lj2A905T24 Lonicera japonica
Lj2g0001997 Lotus japonicus
Lj2g0019943 Lotus japonicus
Lj4A201G47 Lonicera japonica
Lju158A2G31 Lonicera japonica
Lju158A4T7 Lonicera japonica
Lju158C2T3 Lonicera japonica
Lju158C4T3 Lonicera japonica
Lsat_1_v5_gn_2_76261 Lactuca sativa
Lsat_1_v5_gn_3_21081 Lactuca sativa
Manes.01G135300 Manihot esculenta
Manes.02G093600 Manihot esculenta
Manes.03G078116 Manihot esculenta
Mapoly0166s0021 Marchantia polymorpha
MBI16_g31003_MAGBIO Magnolia biondii
MCO01G217 Micromonas commoda
MCO05G390 Micromonas commoda
MD02G1147900 Malus domestica
MD02G1148000 Malus domestica
MD03G1162900 Malus domestica
MD11G1178900 Malus domestica
MD11G1309300 Malus domestica
MD15G1262100 Malus domestica
Medtr5g020120 Medicago truncatula
Medtr5g028010 Medicago truncatula
MELO3C017563.2 Cucumis melo
Migut.E01321 Erythranthe guttata
Migut.H00993 Erythranthe guttata
MSTRG.13896 Avicennia marina
MSTRG.23526 Avicennia marina
Nitab4.5_0001038g0030 Nicotiana tabacum
Nitab4.5_0001348g0070 Nicotiana tabacum
Nitab4.5_0002897g0010 Nicotiana tabacum
Nitab4.5_0003232g0040 Nicotiana tabacum
Nitab4.5_0006977g0020 Nicotiana tabacum
Nitab4.5_0021170g0010 Nicotiana tabacum
Nn1g01855 Nelumbo nucifera
Oeu012599.1 Olea europaea
Oeu017090.1 Olea europaea
Os03g0775500 Oryza sativa ssp. japonica
Os04g0596400 Oryza sativa ssp. japonica
Peaxi162Scf00052g00323 Petunia axillaris
Peaxi162Scf00751g00316 Petunia axillaris
PGR031G3026 Punica granatum
PGR119G1249 Punica granatum
PGSC0003DMG400017791 Solanum tuberosum
PGSC0003DMG402009322 Solanum tuberosum
PGSC0003DMG402020115 Solanum tuberosum
Phvul.002G030201 Phaseolus vulgaris
Phvul.002G135400 Phaseolus vulgaris
Potri.001G135800 Populus trichocarpa
Potri.003G098000 Populus trichocarpa
Potri.005G123100 Populus trichocarpa
Pp3c1_13120 Physcomitrium patens
PRCOL_00001333 Prasinoderma coloniale
Prupe.1G100200 Prunus persica
Prupe.6G151700 Prunus persica
Prupe.7G154400 Prunus persica
Psat2g139840 Pisum sativum
Psat2g159720 Pisum sativum
PSO017G3942 Papaver somniferum
PSO170G1543 Papaver somniferum
PSO210G1750 Papaver somniferum
PSO339G0652 Papaver somniferum
PSO384G0030 Papaver somniferum
PSO675G4609 Papaver somniferum
PSO675G7689 Papaver somniferum
PSO731G0074 Papaver somniferum
QL04p055157 Quercus lobata
QL06p046060 Quercus lobata
RcHm_v2.0_Chr2g0101601 Rosa chinensis
RcHm_v2.0_Chr7g0212191 Rosa chinensis
RcHm_v2.0_Chr7g0212201 Rosa chinensis
Rhsim02G0002300 Rhododendron simsii
Rhsim06G0207900 Rhododendron simsii
Rhsim08G0117000 Rhododendron simsii
Rhsim11G0031700 Rhododendron simsii
Sabra03G0066400 Salix brachista
Sabra05G0101200 Salix brachista
SalBow1G4221 Salvia bowleyana
SalBow2G3338 Salvia bowleyana
Sc03g0002960 Simmondsia chinensis
Sc13g0006200 Simmondsia chinensis
Sed0000806 Sechium edule
Sed0012954 Sechium edule
SEGI_25839 Sequoiadendron giganteum
SEGI_38161 Sequoiadendron giganteum
SGA_v2.0_scaffold111G31390 Striga asiatica
SGA_v2.0_scaffold24G10564 Striga asiatica
SGA_v2.0_scaffold489G52412 Striga asiatica
SMO147G0338 Selaginella moellendorffii
Solyc03g034050.3 Solanum lycopersicum
Solyc06g083060.4 Solanum lycopersicum
Solyc08g076120.3 Solanum lycopersicum
Sopen03g006820 Solanum pennellii
Sopen06g034450 Solanum pennellii
Sopen08g024760 Solanum pennellii
Sp5g11370 Schrenkiella parvula
Sp5g23360 Schrenkiella parvula
TAR622G0538 Trochodendron aralioides
TAR628G1697 Trochodendron aralioides
TAR636G2740 Trochodendron aralioides
TAR675G0001 Trochodendron aralioides
TAR675G0002 Trochodendron aralioides
THA.LOC104821912 Tarenaya hassleriana
THA.LOC104826743 Tarenaya hassleriana
Thecc.01G036100 Theobroma cacao
Thecc.09G239300 Theobroma cacao
Thhalv10010765m.g Eutrema salsugineum
Thhalv10012130m.g Eutrema salsugineum
Thhalv10019265m.g Eutrema salsugineum
Thhalv10022060m.g Eutrema salsugineum
TPR.G19456 Trifolium pratense
TPR.G19472 Trifolium pratense
TPR.G22284 Trifolium pratense
TWI60G0852 Tripterygium wilfordii
TWI73G0102 Tripterygium wilfordii
unitig_578.g15946 Utricularia gibba
vmacro00264 Vaccinium macrocarpon
vmacro17833 Vaccinium macrocarpon
VMungo1215G0252 Vigna mungo
VMungo1215G2447 Vigna mungo
Zm00001eb059210 Zea mays
Zm00001eb072050 Zea mays
Zm00001eb430080 Zea mays

User provided reference genes

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