Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p42500 Brassica napus
A07p12640 Brassica napus
A08p27000 Brassica napus
A09p25050 Brassica napus
Aa31LG1G1470 Aethionema arabicum
Aa31LG2G6550 Aethionema arabicum
Aa31LG7G9010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2858 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1478 Anthoceros agrestis
Actinidia02551 Actinidia chinensis
Actinidia14869 Actinidia chinensis
Actinidia16635 Actinidia chinensis
Actinidia39822 Actinidia chinensis
Ah.02g115330 Amaranthus hybridus
Ah.03g137800 Amaranthus hybridus
Ah.11g045010 Amaranthus hybridus
AL1G25080 Arabidopsis lyrata
AL1G39810 Arabidopsis lyrata
AL5G14380 Arabidopsis lyrata
Aqoxy3G00336 Aquilegia oxysepala
Aqoxy4G00770 Aquilegia oxysepala
Aqoxy5G04018 Aquilegia oxysepala
Aqoxy6G01779 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9V29BW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H8PRE0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I3PUBY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MJ1LA2 Arachis hypogaea
AT1G13320 Arabidopsis thaliana
AT1G25490 Arabidopsis thaliana
AT3G25800 Arabidopsis thaliana
ATR0580G331 Amborella trichopoda
ATR0829G168 Amborella trichopoda
Atru.chr11.1301 Acer truncatum
Atru.chr4.491 Acer truncatum
Atru.chr9.808 Acer truncatum
AUR62002900 Chenopodium quinoa
AUR62025854 Chenopodium quinoa
AUR62029855 Chenopodium quinoa
AUR62035258 Chenopodium quinoa
BcaB03g12019 Brassica carinata
BcaB03g14047 Brassica carinata
BcaC01g01699 Brassica carinata
BcaC04g21416 Brassica carinata
BcaC05g26447 Brassica carinata
BcaC05g26657 Brassica carinata
BcaC06g31116 Brassica carinata
BcaC06g35196 Brassica carinata
BolC3t19588H Brassica oleracea
BolC5t31226H Brassica oleracea
BolC7t42385H Brassica oleracea
BolC7t44001H Brassica oleracea
BolC7t44003H Brassica oleracea
BolC7t44005H Brassica oleracea
BraA06t27163Z Brassica rapa
BraA07t29042Z Brassica rapa
BraA08t34646Z Brassica rapa
BraA09t39448Z Brassica rapa
C07p18770 Brassica napus
C07p34700 Brassica napus
C07p34740 Brassica napus
C07p34760 Brassica napus
CAN.G423.3 Capsicum annuum
CAN.G438.129 Capsicum annuum
CAN.G656.31 Capsicum annuum
CANSAT64G2437 Cannabis sativa
CANSAT64G2906 Cannabis sativa
CARHR013700 Cardamine hirsuta
CARHR025970 Cardamine hirsuta
CARHR146710 Cardamine hirsuta
Carub.0001s1305 Capsella rubella
Carub.0001s2499 Capsella rubella
Carub.0003s3094 Capsella rubella
Carub.0135s0002 Capsella rubella
Ca_11187_v3 Cicer arietinum L.
Ca_25505_v3 Cicer arietinum L.
CBR_g26350 Chara braunii
Cc04_g07250 Coffea canephora
Cc11_g10380 Coffea canephora
CDE01G0229 Ceratophyllum demersum
CDE12G0036 Ceratophyllum demersum
Cfa018613 Carpinus fangiana
Cfa019793 Carpinus fangiana
Cfa026019 Carpinus fangiana
Ciclev10019417m.g Citrus clementina
Ciclev10022447m.g Citrus clementina
Ciclev10031047m.g Citrus clementina
CiPaw.15G129100 Carya illinoinensis
CiPaw.16G085500 Carya illinoinensis
ClCG05G022880 Citrullus lanatus
COL.COLO4_07894 Corchorus olitorius
COL.COLO4_24685 Corchorus olitorius
Cpa.g.sc1.195 Carica papaya
Cpa.g.sc13.7 Carica papaya
Cre11.g477300 Chlamydomonas reinhardtii
CsaV3_5G034150 Cucumis sativus L.
CSS0011159 Camellia sinensis var. sinensis
CSS0014757 Camellia sinensis var. sinensis
CSS0018261 Camellia sinensis var. sinensis
CSS0024618 Camellia sinensis var. sinensis
CSS0035466 Camellia sinensis var. sinensis
CSS0037307 Camellia sinensis var. sinensis
CSS0041203 Camellia sinensis var. sinensis
CSS0045793 Camellia sinensis var. sinensis
DCAR_023674 Daucus carota
DCAR_026723 Daucus carota
Dinv01484 Davidia involucrata
Dinv09810 Davidia involucrata
Duzib068G0381 Durio zibethinus
Duzib084G1403 Durio zibethinus
Duzib205G0830 Durio zibethinus
Duzib268G0057 Durio zibethinus
ECA233G3554 Erigeron canadensis
ECA234G0780 Erigeron canadensis
ECA246G0634 Erigeron canadensis
EL10Ac6g14447 Beta vulgaris
Eucgr.B03031 Eucalyptus grandis
Eucgr.K02214 Eucalyptus grandis
FAN05G1934 Fragaria x ananassa
FAN05G2211 Fragaria x ananassa
FAN07G2983 Fragaria x ananassa
FAN22G0092 Fragaria x ananassa
FAN23G0747 Fragaria x ananassa
FAN26G2317 Fragaria x ananassa
FAN28G1117 Fragaria x ananassa
FvH4_4g27700 Fragaria vesca
FvH4_5g12331 Fragaria vesca
Glyma.02G097600 Glycine max
Glyma.07G090200 Glycine max
Glyma.09G185700 Glycine max
Glyma.10G275800 Glycine max
Glyma.20G114000 Glycine max
Gohir.A08G094486 Gossypium hirsutum
Gohir.A11G005800 Gossypium hirsutum
Gohir.A12G168500 Gossypium hirsutum
Gohir.A12G266100 Gossypium hirsutum
Gohir.A13G053582 Gossypium hirsutum
Gohir.D08G106400 Gossypium hirsutum
Gohir.D08G106500 Gossypium hirsutum
Gohir.D11G004900 Gossypium hirsutum
Gohir.D12G172100 Gossypium hirsutum
Gohir.D12G266300 Gossypium hirsutum
Gohir.D13G071000 Gossypium hirsutum
Gorai.004G112500 Gossypium raimondii
Gorai.007G006100 Gossypium raimondii
Gorai.008G184500 Gossypium raimondii
Gorai.008G286100 Gossypium raimondii
Gorai.013G081300 Gossypium raimondii
GSVIVG01008268001 Vitis vinifera
GSVIVG01011923001 Vitis vinifera
GSVIVG01036014001 Vitis vinifera
HanXRQChr08g0214251 Helianthus annuus
HanXRQChr15g0477191 Helianthus annuus
HanXRQChr16g0529631 Helianthus annuus
Haze_17456 Corylus avellana
Haze_18656 Corylus avellana
Haze_26341 Corylus avellana
Hma1.2p1_0030F.1_g018230 Hydrangea macrophylla
HPP92_003023 Vanilla planifolia
Hund02394 Selenicereus undatus
Hund25087 Selenicereus undatus
Lalb_Chr06g0166161 Lupinus albus
Lalb_Chr10g0099911 Lupinus albus
Lalb_Chr14g0371251 Lupinus albus
Lalb_Chr17g0342011 Lupinus albus
Lalb_Chr24g0397731 Lupinus albus
Lj2g0004455 Lotus japonicus
Lj2g0015455 Lotus japonicus
Lj3C1018T2 Lonicera japonica
Lj5g0027276 Lotus japonicus
Lj6C761T14 Lonicera japonica
Lj6C763G9 Lonicera japonica
Lsat_1_v5_gn_3_59680 Lactuca sativa
Lsat_1_v5_gn_4_18660 Lactuca sativa
Lsat_1_v5_gn_8_38881 Lactuca sativa
Manes.01G012700 Manihot esculenta
Manes.05G138400 Manihot esculenta
Manes.06G070500 Manihot esculenta
Manes.14G099600 Manihot esculenta
Mapoly0107s0027 Marchantia polymorpha
MBI14_g22129_MAGBIO Magnolia biondii
MBI15_g38794_MAGBIO Magnolia biondii
MBI16_g23307_MAGBIO Magnolia biondii
MBI19_g40801_MAGBIO Magnolia biondii
MCO15G645 Micromonas commoda
MD06G1214700 Malus domestica
MD13G1044500 Malus domestica
MD14G1225600 Malus domestica
MD16G1045400 Malus domestica
Medtr1g111270 Medicago truncatula
Medtr6g084690 Medicago truncatula
MELO3C012229.2 Cucumis melo
Migut.E00322 Erythranthe guttata
Migut.L01084 Erythranthe guttata
MSTRG.13514 Avicennia marina
MSTRG.822 Avicennia marina
Nitab4.5_0001599g0020 Nicotiana tabacum
Nitab4.5_0003823g0090 Nicotiana tabacum
Nitab4.5_0004412g0050 Nicotiana tabacum
Nitab4.5_0004895g0070 Nicotiana tabacum
Nitab4.5_0010801g0030 Nicotiana tabacum
Nitab4.5_0011561g0040 Nicotiana tabacum
Nn3g17795 Nelumbo nucifera
Nn4g23796 Nelumbo nucifera
Oeu010777.1 Olea europaea
Oeu020342.2 Olea europaea
Oeu041894.1 Olea europaea
Os09g0249700 Oryza sativa ssp. japonica
Peaxi162Scf00013g00935 Petunia axillaris
Peaxi162Scf00015g00833 Petunia axillaris
Peaxi162Scf00382g00122 Petunia axillaris
PGR044G2305 Punica granatum
PGR119G2353 Punica granatum
PGSC0003DMG400004052 Solanum tuberosum
PGSC0003DMG400012971 Solanum tuberosum
PGSC0003DMG402015876 Solanum tuberosum
Phvul.003G029000 Phaseolus vulgaris
Phvul.004G159000 Phaseolus vulgaris
Phvul.007G025800 Phaseolus vulgaris
Potri.008G118500 Populus trichocarpa
Potri.010G127500 Populus trichocarpa
Potri.012G062700 Populus trichocarpa
Pp3c16_16120 Physcomitrium patens
Pp3c27_6310 Physcomitrium patens
Pp3c6_29310 Physcomitrium patens
Pp3c6_29317 Physcomitrium patens
PRCOL_00003010 Prasinoderma coloniale
Prupe.1G307900 Prunus persica
Prupe.5G220100 Prunus persica
Psat0s251g0400 Pisum sativum
Psat1g039040 Pisum sativum
Psat6g166320 Pisum sativum
Psat6g229400 Pisum sativum
PSO017G6434 Papaver somniferum
PSO063G5730 Papaver somniferum
PSO478G1469 Papaver somniferum
PSO782G3968 Papaver somniferum
QL01p044128 Quercus lobata
QL10p025031 Quercus lobata
RcHm_v2.0_Chr4g0435561 Rosa chinensis
RcHm_v2.0_Chr7g0185211 Rosa chinensis
Rhsim04G0247100 Rhododendron simsii
Sabra08G0089900 Salix brachista
Sabra10G0096900 Salix brachista
Sabra12G0045900 Salix brachista
SalBow1G3956 Salvia bowleyana
SalBow8G2594 Salvia bowleyana
SalBow8G3841 Salvia bowleyana
SalBow8G4326 Salvia bowleyana
Sc04g0003610 Simmondsia chinensis
Sc04g0006590 Simmondsia chinensis
Sc10g0009490 Simmondsia chinensis
Sed0021563 Sechium edule
Sed0027065 Sechium edule
SGA_v2.0_scaffold124G33556 Striga asiatica
SGA_v2.0_scaffold170G38749 Striga asiatica
SGA_v2.0_scaffold36G14534 Striga asiatica
SMO144G0049 Selaginella moellendorffii
SMO358G0670 Selaginella moellendorffii
Solyc04g007100.4 Solanum lycopersicum
Solyc05g009600.4 Solanum lycopersicum
Solyc06g069180.3 Solanum lycopersicum
Sopen04g002180 Solanum pennellii
Sopen05g005410 Solanum pennellii
Sopen06g026450 Solanum pennellii
Sp1g11830 Schrenkiella parvula
Sp1g22720 Schrenkiella parvula
Sp2g15040 Schrenkiella parvula
Sp5g30960 Schrenkiella parvula
TAR374G0064 Trochodendron aralioides
TAR622G0829 Trochodendron aralioides
TAR629G0395 Trochodendron aralioides
THA.LOC104805249 Tarenaya hassleriana
THA.LOC104821949 Tarenaya hassleriana
THA.LOC104824034 Tarenaya hassleriana
Thecc.02G358200 Theobroma cacao
Thecc.03G033200 Theobroma cacao
Thhalv10003886m.g Eutrema salsugineum
Thhalv10007162m.g Eutrema salsugineum
Thhalv10007164m.g Eutrema salsugineum
TPR.G26318 Trifolium pratense
TPR.G35238 Trifolium pratense
TWI15G0764 Tripterygium wilfordii
TWI31G0283 Tripterygium wilfordii
TWI79G0703 Tripterygium wilfordii
TWI81G0648 Tripterygium wilfordii
unitig_26.g10265 Utricularia gibba
unitig_749.g13182 Utricularia gibba
vmacro07999 Vaccinium macrocarpon
vmacro10543 Vaccinium macrocarpon
VMungo0464G0411 Vigna mungo
VMungo0720G2623 Vigna mungo
VMungo1215G2669 Vigna mungo
VMungo1389G0002 Vigna mungo
Zm00001eb269610 Zea mays
Zm00001eb378360 Zea mays
Zm00001eb386290 Zea mays

User provided reference genes

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