Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35870 Brassica napus
A04p05040 Brassica napus
A04p05060 Brassica napus
Aa31LG11G8110 Aethionema arabicum
Aa31LG3G2090 Aethionema arabicum
Actinidia03026 Actinidia chinensis
Actinidia04696 Actinidia chinensis
Actinidia19715 Actinidia chinensis
Actinidia38246 Actinidia chinensis
Ah.12g058150 Amaranthus hybridus
AL3G20880 Arabidopsis lyrata
AL5G35830 Arabidopsis lyrata
AL5G35840 Arabidopsis lyrata
AL6G12240 Arabidopsis lyrata
Aqoxy1G01590 Aquilegia oxysepala
Aqoxy4G03191 Aquilegia oxysepala
AT3G09670 Arabidopsis thaliana
AT3G54760 Arabidopsis thaliana
AT5G02950 Arabidopsis thaliana
ATR1159G033 Amborella trichopoda
Atru.chr12.631 Acer truncatum
Atru.chr12.632 Acer truncatum
Atru.chr8.2555 Acer truncatum
AUR62010520 Chenopodium quinoa
AUR62017379 Chenopodium quinoa
AUR62024512 Chenopodium quinoa
AUR62026103 Chenopodium quinoa
AUR62039783 Chenopodium quinoa
AUR62040020 Chenopodium quinoa
AUR62044639 Chenopodium quinoa
BcaB02g08459 Brassica carinata
BcaB02g08462 Brassica carinata
BcaB03g11591 Brassica carinata
BcaB05g21860 Brassica carinata
BcaC01g04242 Brassica carinata
BcaC02g09702 Brassica carinata
BcaC03g13040 Brassica carinata
BolC2t06070H Brassica oleracea
BolC2t06168H Brassica oleracea
BolC3t16622H Brassica oleracea
BolC4t25319H Brassica oleracea
BolC4t25322H Brassica oleracea
BolC4t25323H Brassica oleracea
BraA02t04737Z Brassica rapa
BraA03t12760Z Brassica rapa
BraA04t16215Z Brassica rapa
BraA04t16217Z Brassica rapa
C02p00720 Brassica napus
C03p43520 Brassica napus
C04p37540 Brassica napus
C05p58410 Brassica napus
CAN.G113.8 Capsicum annuum
CAN.G608.13 Capsicum annuum
CARHR084090 Cardamine hirsuta
CARHR164700 Cardamine hirsuta
CARHR164710 Cardamine hirsuta
CARHR210340 Cardamine hirsuta
Carub.0002s0694 Capsella rubella
Carub.0002s0695 Capsella rubella
Carub.0002s0696 Capsella rubella
Carub.0002s0697 Capsella rubella
Carub.0003s0876 Capsella rubella
Carub.0003s3550 Capsella rubella
Carub.0006s0175 Capsella rubella
Ca_09783_v3 Cicer arietinum L.
Ca_11449_v3 Cicer arietinum L.
Ca_27423_v3 Cicer arietinum L.
Cc06_g03560 Coffea canephora
Cc09_g02640 Coffea canephora
CDE02G3211 Ceratophyllum demersum
Cfa001590 Carpinus fangiana
Ciclev10010946m.g Citrus clementina
Ciclev10030525m.g Citrus clementina
CiPaw.02G176700 Carya illinoinensis
CiPaw.02G176900 Carya illinoinensis
CiPaw.09G180000 Carya illinoinensis
ClCG02G013880 Citrullus lanatus
ClCG07G013520 Citrullus lanatus
COL.COLO4_23754 Corchorus olitorius
COL.COLO4_27083 Corchorus olitorius
Cpa.g.sc114.40 Carica papaya
Cpa.g.sc53.36 Carica papaya
CsaV3_3G044140 Cucumis sativus L.
CsaV3_5G006280 Cucumis sativus L.
CSS0000157 Camellia sinensis var. sinensis
CSS0010994 Camellia sinensis var. sinensis
DCAR_006466 Daucus carota
DCAR_006467 Daucus carota
DCAR_014961 Daucus carota
Dinv31338 Davidia involucrata
Dinv31341 Davidia involucrata
Dinv31342 Davidia involucrata
Duzib093G2126 Durio zibethinus
Duzib114G0150 Durio zibethinus
Duzib128G0638 Durio zibethinus
ECA233G6180 Erigeron canadensis
ECA233G6194 Erigeron canadensis
ECA234G4508 Erigeron canadensis
ECA238G0012 Erigeron canadensis
ECA238G1586 Erigeron canadensis
EL10Ac3g07139 Beta vulgaris
EL10Ac5g12631 Beta vulgaris
EL10Ac7g17350 Beta vulgaris
Eucgr.G02799 Eucalyptus grandis
Eucgr.K03210 Eucalyptus grandis
FAN01G0071 Fragaria x ananassa
FAN02G1340 Fragaria x ananassa
FAN02G2638 Fragaria x ananassa
FAN03G1459 Fragaria x ananassa
FAN03G2424 Fragaria x ananassa
FAN05G0228 Fragaria x ananassa
FAN05G1887 Fragaria x ananassa
FAN06G2522 Fragaria x ananassa
FAN09G2971 Fragaria x ananassa
FAN09G3879 Fragaria x ananassa
FAN10G3244 Fragaria x ananassa
FAN14G2318 Fragaria x ananassa
FAN14G3376 Fragaria x ananassa
FvH4_6g15300 Fragaria vesca
FvH4_6g15320 Fragaria vesca
FvH4_7g20250 Fragaria vesca
Glyma.02G087500 Glycine max
Glyma.10G049300 Glycine max
Glyma.10G116800 Glycine max
Glyma.10G192100 Glycine max
Glyma.13G137000 Glycine max
Glyma.20G198402 Glycine max
Gohir.A01G217300 Gossypium hirsutum
Gohir.A05G344100 Gossypium hirsutum
Gohir.A05G344300 Gossypium hirsutum
Gohir.D01G206000 Gossypium hirsutum
Gohir.D04G082500 Gossypium hirsutum
Gohir.D04G082800 Gossypium hirsutum
Gorai.002G250400 Gossypium raimondii
Gorai.012G093200 Gossypium raimondii
Gorai.012G093500 Gossypium raimondii
GSVIVG01016344001 Vitis vinifera
GSVIVG01025624001 Vitis vinifera
HanXRQChr12g0370321 Helianthus annuus
HanXRQChr12g0370331 Helianthus annuus
HanXRQChr12g0370341 Helianthus annuus
HanXRQChr13g0399751 Helianthus annuus
HanXRQChr14g0435641 Helianthus annuus
HanXRQChr14g0454651 Helianthus annuus
Haze_16938 Corylus avellana
Haze_20651 Corylus avellana
Hma1.2p1_0111F.1_g053880 Hydrangea macrophylla
HPP92_012068 Vanilla planifolia
HPP92_018114 Vanilla planifolia
Hund20160 Selenicereus undatus
Lalb_Chr03g0036481 Lupinus albus
Lalb_Chr03g0036491 Lupinus albus
Lalb_Chr21g0314651 Lupinus albus
Lj3C979T7 Lonicera japonica
Lj5g0013876 Lotus japonicus
Lj5g0028198 Lotus japonicus
Lj6g0011965 Lotus japonicus
Lsat_1_v5_gn_2_109641 Lactuca sativa
Lsat_1_v5_gn_6_29660 Lactuca sativa
Lsat_1_v5_gn_8_21460 Lactuca sativa
Manes.08G003300 Manihot esculenta
Manes.10G041700 Manihot esculenta
Manes.10G041900 Manihot esculenta
MBI14_g26603_MAGBIO Magnolia biondii
MD01G1112200 Malus domestica
MD07G1179800 Malus domestica
MD12G1124400 Malus domestica
Medtr1g049120 Medicago truncatula
Medtr1g066890 Medicago truncatula
Medtr1g072780 Medicago truncatula
Medtr2g013200 Medicago truncatula
Medtr2g047912 Medicago truncatula
Medtr2g104120 Medicago truncatula
Medtr2g104980 Medicago truncatula
Medtr4g036445 Medicago truncatula
Medtr8g035700 Medicago truncatula
Medtr8g054220 Medicago truncatula
Medtr8g054270 Medicago truncatula
Medtr8g054290 Medicago truncatula
Medtr8g080970 Medicago truncatula
MELO3C011728.2 Cucumis melo
MELO3C013022.2 Cucumis melo
Migut.F02023 Erythranthe guttata
Migut.F02025 Erythranthe guttata
Migut.L01658 Erythranthe guttata
MSTRG.27445 Avicennia marina
MSTRG.27446 Avicennia marina
MSTRG.9206 Avicennia marina
Nitab4.5_0000061g0230 Nicotiana tabacum
Nitab4.5_0001142g0090 Nicotiana tabacum
Nitab4.5_0003895g0030 Nicotiana tabacum
Nitab4.5_0005387g0010 Nicotiana tabacum
Nn2g12991 Nelumbo nucifera
Oeu007703.1 Olea europaea
Oeu007705.1 Olea europaea
Oeu026843.1 Olea europaea
Oeu035143.1 Olea europaea
Oeu055047.1 Olea europaea
Oeu060084.1 Olea europaea
Os05g0463500 Oryza sativa ssp. japonica
Os07g0694500 Oryza sativa ssp. japonica
Peaxi162Scf00373g00021 Petunia axillaris
PGR004G1993 Punica granatum
PGR044G1213 Punica granatum
PGSC0003DMG400010571 Solanum tuberosum
PGSC0003DMG400036874 Solanum tuberosum
Phvul.007G134100 Phaseolus vulgaris
Phvul.007G163600 Phaseolus vulgaris
Phvul.007G240300 Phaseolus vulgaris
Potri.006G131800 Populus trichocarpa
Potri.008G044600 Populus trichocarpa
Potri.010G216900 Populus trichocarpa
Potri.016G085500 Populus trichocarpa
Prupe.2G219200 Prunus persica
Prupe.6G241400 Prunus persica
Psat0s1977g0040 Pisum sativum
Psat1g033240 Pisum sativum
Psat2g053480 Pisum sativum
Psat2g055760 Pisum sativum
Psat6g049760 Pisum sativum
Psat6g070600 Pisum sativum
Psat6g140320 Pisum sativum
Psat7g035440 Pisum sativum
PSO210G3519 Papaver somniferum
PSO210G7506 Papaver somniferum
PSO339G4758 Papaver somniferum
PSO384G0136 Papaver somniferum
QL07p045288 Quercus lobata
QL08p056900 Quercus lobata
RcHm_v2.0_Chr1g0364181 Rosa chinensis
RcHm_v2.0_Chr3g0468721 Rosa chinensis
RcHm_v2.0_Chr3g0468761 Rosa chinensis
RcHm_v2.0_Chr3g0468791 Rosa chinensis
Rhsim09G0154300 Rhododendron simsii
RhsimUnG0118400 Rhododendron simsii
Sabra06G0103400 Salix brachista
Sabra08G0030900 Salix brachista
Sabra10G0167800 Salix brachista
SalBow1G2996 Salvia bowleyana
SalBow4G3302 Salvia bowleyana
Sc07g0006250 Simmondsia chinensis
Sc20g0002090 Simmondsia chinensis
Sed0010715 Sechium edule
Sed0014953 Sechium edule
Sed0017477 Sechium edule
Sed0022914 Sechium edule
SEGI_06466 Sequoiadendron giganteum
SGA_v2.0_scaffold62G21451 Striga asiatica
SGA_v2.0_scaffold62G21453 Striga asiatica
SGA_v2.0_scaffold94G28666 Striga asiatica
Solyc04g049930.2 Solanum lycopersicum
Solyc04g049950.1 Solanum lycopersicum
Solyc09g007340.4 Solanum lycopersicum
Sopen04g020580 Solanum pennellii
Sopen09g002220 Solanum pennellii
Sp3g08010 Schrenkiella parvula
Sp5g07670 Schrenkiella parvula
Sp5g07680 Schrenkiella parvula
Sp5g07690 Schrenkiella parvula
TAR623G0542 Trochodendron aralioides
TAR623G1395 Trochodendron aralioides
TAR633G0412 Trochodendron aralioides
TAR636G0979 Trochodendron aralioides
TAR636G1494 Trochodendron aralioides
THA.LOC104824224 Tarenaya hassleriana
THA.LOC104825235 Tarenaya hassleriana
THA.LOC104826984 Tarenaya hassleriana
THA.LOC104827500 Tarenaya hassleriana
Thecc.02G021700 Theobroma cacao
Thecc.02G022000 Theobroma cacao
Thecc.02G022100 Theobroma cacao
Thecc.05G053800 Theobroma cacao
Thecc.10G067400 Theobroma cacao
Thhalv10010125m.g Eutrema salsugineum
Thhalv10010166m.g Eutrema salsugineum
Thhalv10015666m.g Eutrema salsugineum
Thhalv10020687m.g Eutrema salsugineum
TPR.G18567 Trifolium pratense
TPR.G30256 Trifolium pratense
TPR.G30257 Trifolium pratense
TPR.G35697 Trifolium pratense
TWI15G0675 Tripterygium wilfordii
TWI38G0064 Tripterygium wilfordii
TWI74G1097 Tripterygium wilfordii
TWI77G0883 Tripterygium wilfordii
unitig_0.g692 Utricularia gibba
unitig_37.g12294 Utricularia gibba
unitig_46.g18582 Utricularia gibba
vmacro04892 Vaccinium macrocarpon
vmacro20062 Vaccinium macrocarpon
VMungo0720G0251 Vigna mungo
VMungo0720G0832 Vigna mungo
VMungo0720G2399 Vigna mungo
Zm00001eb112020 Zea mays
Zm00001eb289850 Zea mays
Zm00001eb351570 Zea mays
Zm00001eb411240 Zea mays

User provided reference genes

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