Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
AL2G20668 Arabidopsis lyrata
AL2G21530 Arabidopsis lyrata
arahy.Tifrunner.gnm1.ann1.15M9SP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3WU3U6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6V23H5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AG95Q9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HP88CG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J4M97S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MXT580 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SJQ568 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y8HZNS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.YEGK0N Arachis hypogaea
ATCG00500 Arabidopsis thaliana
AUR62004684 Chenopodium quinoa
AUR62006476 Chenopodium quinoa
AUR62032522 Chenopodium quinoa
BcaB01g03056 Brassica carinata
BcaC04g21638 Brassica carinata
BNapus_Darmor_BZH_scaffold_253p00210 Brassica napus
BNapus_Darmor_BZH_scaffold_287p00130 Brassica napus
BolC2t08571H Brassica oleracea
BolC9t55819H Brassica oleracea
BolSC29t60465H Brassica oleracea
BolSC29t60587H Brassica oleracea
BolSC35t60644H Brassica oleracea
BolSC35t60752H Brassica oleracea
BolSC45t60951H Brassica oleracea
BolSC46t60998H Brassica oleracea
BolSC46t61037H Brassica oleracea
BolSC47t61099H Brassica oleracea
BolSC47t61125H Brassica oleracea
BolSC49t61185H Brassica oleracea
BraA06t25423Z Brassica rapa
BraSC25t45846Z Brassica rapa
BraSC25t45868Z Brassica rapa
BraSC58t46420Z Brassica rapa
BraSC59t46593Z Brassica rapa
C02p24800 Brassica napus
C02p43520 Brassica napus
C09p29580 Brassica napus
C09p40220 Brassica napus
CAN.G1.10 Capsicum annuum
CAN.G1007.1 Capsicum annuum
CAN.G1012.2 Capsicum annuum
CAN.G1012.3 Capsicum annuum
CAN.G1012.4 Capsicum annuum
CAN.G1183.3 Capsicum annuum
CAN.G1478.9 Capsicum annuum
CAN.G1693.6 Capsicum annuum
CAN.G1897.7 Capsicum annuum
CAN.G212.7 Capsicum annuum
CAN.G3.25 Capsicum annuum
CAN.G445.6 Capsicum annuum
CAN.G653.1 Capsicum annuum
CAN.G793.44 Capsicum annuum
CAN.G88.2 Capsicum annuum
CARHR116850 Cardamine hirsuta
CARHR116860 Cardamine hirsuta
CARHR282090 Cardamine hirsuta
Cc00_g01670 Coffea canephora
Cc06_g18130 Coffea canephora
Cc07_g17490 Coffea canephora
Cc11_g02210 Coffea canephora
CDE02G1301 Ceratophyllum demersum
CDE02G2600 Ceratophyllum demersum
CDE02G3015 Ceratophyllum demersum
CiPaw.05G175100 Carya illinoinensis
ClCG01G001030 Citrullus lanatus
Cpa.g.sc0.171 Carica papaya
Cpa.g.sc120.42 Carica papaya
Cre12.g484000 Chlamydomonas reinhardtii
CSS0050017 Camellia sinensis var. sinensis
DCAR_032493 Daucus carota
EL10Ac2g03065 Beta vulgaris
EL10Ac4g10120 Beta vulgaris
EL10As12g24027 Beta vulgaris
EL10As15g24119 Beta vulgaris
Eucgr.E02609 Eucalyptus grandis
Eucgr.I02537 Eucalyptus grandis
Glyma.15G248500 Glycine max
Gohir.1Z049999 Gossypium hirsutum
Gohir.1Z050266 Gossypium hirsutum
Gohir.A07G134850 Gossypium hirsutum
Gohir.A07G163654 Gossypium hirsutum
Gohir.A07G167012 Gossypium hirsutum
Gohir.A08G085042 Gossypium hirsutum
Gohir.A09G101966 Gossypium hirsutum
Gohir.A11G156733 Gossypium hirsutum
Gohir.D01G102333 Gossypium hirsutum
Gohir.D04G104036 Gossypium hirsutum
Gohir.D04G104048 Gossypium hirsutum
Gohir.D04G129256 Gossypium hirsutum
Gohir.D13G043800 Gossypium hirsutum
Gohir.D13G123550 Gossypium hirsutum
Gorai.001G212300 Gossypium raimondii
Gorai.003G066100 Gossypium raimondii
Gorai.004G276900 Gossypium raimondii
Gorai.005G127400 Gossypium raimondii
Gorai.012G151800 Gossypium raimondii
Gorai.013G138600 Gossypium raimondii
HanXRQChr00c0702g0576831 Helianthus annuus
HanXRQChr00c0759g0577191 Helianthus annuus
HanXRQChr01g0020371 Helianthus annuus
HanXRQChr02g0041561 Helianthus annuus
HanXRQChr02g0044911 Helianthus annuus
HanXRQChr08g0210341 Helianthus annuus
HanXRQChr10g0283541 Helianthus annuus
HanXRQChr10g0284231 Helianthus annuus
HanXRQChr10g0289251 Helianthus annuus
HanXRQChr10g0318211 Helianthus annuus
HanXRQChr10g0318221 Helianthus annuus
HanXRQChr11g0326811 Helianthus annuus
HanXRQChr13g0413531 Helianthus annuus
HanXRQCPg0580021 Helianthus annuus
Hma1.2p1_0242F.1_g100623 Hydrangea macrophylla
Hma1.2p1_0242F.1_g100626 Hydrangea macrophylla
Hma1.2p1_0242F.1_g100629 Hydrangea macrophylla
Hma1.2p1_0355F.1_g133923 Hydrangea macrophylla
Hma1.2p1_0355F.1_g133926 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229660 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229661 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229662 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229663 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229665 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229667 Hydrangea macrophylla
Hma1.2p1_0861F.1_g229669 Hydrangea macrophylla
HPP92_028392 Vanilla planifolia
HPP92_028399 Vanilla planifolia
HPP92_028409 Vanilla planifolia
Hund01487 Selenicereus undatus
Hund03831 Selenicereus undatus
Hund04049 Selenicereus undatus
Hund04050 Selenicereus undatus
Hund07992 Selenicereus undatus
Hund08023 Selenicereus undatus
Hund08575 Selenicereus undatus
Hund08809 Selenicereus undatus
Hund15805 Selenicereus undatus
Hund19838 Selenicereus undatus
Hund22639 Selenicereus undatus
Hund22772 Selenicereus undatus
Hund27485 Selenicereus undatus
Hund27490 Selenicereus undatus
Hund27570 Selenicereus undatus
Hund27599 Selenicereus undatus
Hund27874 Selenicereus undatus
Hund27955 Selenicereus undatus
Hund27977 Selenicereus undatus
Hund28101 Selenicereus undatus
Hund28450 Selenicereus undatus
Hund28473 Selenicereus undatus
Hund28492 Selenicereus undatus
Hund28493 Selenicereus undatus
Hund28511 Selenicereus undatus
Hund28624 Selenicereus undatus
Hund28670 Selenicereus undatus
Hund28722 Selenicereus undatus
Hund28738 Selenicereus undatus
Hund28748 Selenicereus undatus
Hund28838 Selenicereus undatus
Hund29142 Selenicereus undatus
Hund29174 Selenicereus undatus
Hund29210 Selenicereus undatus
Hund29363 Selenicereus undatus
Hund29462 Selenicereus undatus
Hund29492 Selenicereus undatus
Hund29619 Selenicereus undatus
Hund29637 Selenicereus undatus
Hund29721 Selenicereus undatus
Hund29722 Selenicereus undatus
Hund29805 Selenicereus undatus
Hund29828 Selenicereus undatus
Hund29868 Selenicereus undatus
Hund30328 Selenicereus undatus
Hund30362 Selenicereus undatus
Hund30468 Selenicereus undatus
Hund30508 Selenicereus undatus
Hund30560 Selenicereus undatus
Hund30896 Selenicereus undatus
Lalb_Chr10g0102281 Lupinus albus
Lalb_Chr11g0071601 Lupinus albus
Lalb_Chr23g0274531 Lupinus albus
Lalb_Chr23g0274541 Lupinus albus
Lj1g0000993 Lotus japonicus
Lj1P303T21 Lonicera japonica
Lj2A1237T126 Lonicera japonica
Lj2C1239G27 Lonicera japonica
Lj2C1239G28 Lonicera japonica
Lj2C1239T39 Lonicera japonica
LjContig00318g0000728 Lotus japonicus
Lsat_1_v5_gn_2_70561 Lactuca sativa
Lsat_1_v5_gn_4_102681 Lactuca sativa
Lsat_1_v5_gn_4_69480 Lactuca sativa
Lsat_1_v5_gn_4_69500 Lactuca sativa
Lsat_1_v5_gn_7_98301 Lactuca sativa
Lsat_1_v5_gn_7_98321 Lactuca sativa
Lsat_1_v5_gn_8_144641 Lactuca sativa
Lsat_1_v5_gn_9_98941 Lactuca sativa
Mapoly0068s0003 Marchantia polymorpha
MD02G1049400 Malus domestica
MD02G1049500 Malus domestica
MD02G1213300 Malus domestica
MD11G1294800 Malus domestica
Medtr3g077610 Medicago truncatula
Medtr3g080300 Medicago truncatula
Medtr4g034770 Medicago truncatula
Medtr4g050863 Medicago truncatula
Medtr4g071480 Medicago truncatula
Medtr5g009280 Medicago truncatula
MELO3C000334.2 Cucumis melo
MELO3C001225.2 Cucumis melo
MELO3C027978.2 Cucumis melo
MELO3C028653.2 Cucumis melo
MELO3C028654.2 Cucumis melo
MELO3C029533.2 Cucumis melo
MELO3C031612.2 Cucumis melo
MELO3C032364.2 Cucumis melo
MELO3C034228.2 Cucumis melo
Migut.D01360 Erythranthe guttata
Migut.L00565 Erythranthe guttata
Nitab4.5_0000138g0260 Nicotiana tabacum
Nitab4.5_0000342g0250 Nicotiana tabacum
Nitab4.5_0003644g0070 Nicotiana tabacum
Nitab4.5_0009663g0040 Nicotiana tabacum
Nitab4.5_0009663g0050 Nicotiana tabacum
Nn010s41432 Nelumbo nucifera
Nn010s41447 Nelumbo nucifera
Nn1g00306 Nelumbo nucifera
Nn1g04062 Nelumbo nucifera
Nn1g07561 Nelumbo nucifera
Nn265s45953 Nelumbo nucifera
Nn2g12581 Nelumbo nucifera
Nn3g19983 Nelumbo nucifera
Nn3g19984 Nelumbo nucifera
Nn3g21288 Nelumbo nucifera
Oeu012807.1 Olea europaea
Oeu028778.1 Olea europaea
Peaxi162Scf00021g00818 Petunia axillaris
Peaxi162Scf00021g00819 Petunia axillaris
Peaxi162Scf00068g00152 Petunia axillaris
Peaxi162Scf00937g00111 Petunia axillaris
Peaxi162Scf01064g00230 Petunia axillaris
PGR111G0026 Punica granatum
Phvul.002G278116 Phaseolus vulgaris
Phvul.006G066900 Phaseolus vulgaris
Potri.005G150200 Populus trichocarpa
Potri.013G162600 Populus trichocarpa
Prupe.7G029700 Prunus persica
Psat0s1152g0040 Pisum sativum
Psat0s1586g0200 Pisum sativum
Psat0s1586g0240 Pisum sativum
Psat0s2288g0120 Pisum sativum
Psat0s2288g0160 Pisum sativum
Psat0s2754g0160 Pisum sativum
Psat0s415g0040 Pisum sativum
Psat0s6989g0080 Pisum sativum
Psat2g111000 Pisum sativum
Psat2g111040 Pisum sativum
Psat4g084400 Pisum sativum
Psat5g134800 Pisum sativum
Psat5g134840 Pisum sativum
Psat5g286240 Pisum sativum
Psat6g140480 Pisum sativum
PSO548G0072 Papaver somniferum
QL93p0311_0018 Quercus lobata
RcHm_v2.0_Chr5g0042991 Rosa chinensis
RcHm_v2.0_Chr6g0281331 Rosa chinensis
RcHm_v2.0_Chr6g0281341 Rosa chinensis
RcHm_v2.0_CPg0502101 Rosa chinensis
Sabra10G0056300 Salix brachista
Sc03g0005200 Simmondsia chinensis
Sc10g0007010 Simmondsia chinensis
Sc23g0003920 Simmondsia chinensis
Sed0009930 Sechium edule
Sed0010807 Sechium edule
Sed0026664 Sechium edule
SEGI_26563 Sequoiadendron giganteum
SEGI_26932 Sequoiadendron giganteum
SEGI_31685 Sequoiadendron giganteum
SGA_v2.0_scaffold255G45490 Striga asiatica
SGA_v2.0_scaffold400G50898 Striga asiatica
SGA_v2.0_scaffold781G53597 Striga asiatica
SMO364G0525 Selaginella moellendorffii
Solyc00g500065.1 Solanum lycopersicum
Solyc01g017200.2 Solanum lycopersicum
Solyc02g032810.1 Solanum lycopersicum
Solyc04g039820.3 Solanum lycopersicum
Solyc04g039830.3 Solanum lycopersicum
Solyc09g091410.2 Solanum lycopersicum
Sopen04g010000 Solanum pennellii
Sopen07g002120 Solanum pennellii
Thhalv10011034m.g Eutrema salsugineum
TPR.G16839 Trifolium pratense
unitig_91.g26508 Utricularia gibba
vmacro13610 Vaccinium macrocarpon
vmacro13611 Vaccinium macrocarpon
vmacro18167 Vaccinium macrocarpon
vmacro18617 Vaccinium macrocarpon

User provided reference genes

Program Settings