Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p23370 Brassica napus
A05p14860 Brassica napus
A08p37020 Brassica napus
A09p66800 Brassica napus
A10p02680 Brassica napus
Aa31LG1G20560 Aethionema arabicum
Aa31LG1G7810 Aethionema arabicum
Aa31LG5G6140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3819 Anthoceros agrestis
Actinidia04478 Actinidia chinensis
Actinidia24812 Actinidia chinensis
Ah.11g048900 Amaranthus hybridus
AL1G13880 Arabidopsis lyrata
AL1G16760 Arabidopsis lyrata
AL4G25520 Arabidopsis lyrata
Aqoxy5G00316 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1628KP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9YN1SN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AF70II Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DZA8L1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F916KL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KTZ8QC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S22EMT Arachis hypogaea
AT1G04280 Arabidopsis thaliana
AT1G06750 Arabidopsis thaliana
AT2G30630 Arabidopsis thaliana
Atru.chr4.2230 Acer truncatum
Atru.chr5.1600 Acer truncatum
AUR62008326 Chenopodium quinoa
AUR62011922 Chenopodium quinoa
AUR62021771 Chenopodium quinoa
AUR62032237 Chenopodium quinoa
BcaB02g10337 Brassica carinata
BcaB06g28379 Brassica carinata
BcaC02g11159 Brassica carinata
BcaC05g24456 Brassica carinata
BcaC07g36922 Brassica carinata
BcaC07g42050 Brassica carinata
BcaC07g42195 Brassica carinata
BcaNung06674 Brassica carinata
BolC4t23525H Brassica oleracea
BolC4t27475H Brassica oleracea
BolC5t29026H Brassica oleracea
BolC8t46899H Brassica oleracea
BolC8t52630H Brassica oleracea
BraA05t20413Z Brassica rapa
BraA09t42018Z Brassica rapa
BraA10t42537Z Brassica rapa
C04p19870 Brassica napus
C04p59670 Brassica napus
C05p02470 Brassica napus
C08p00990 Brassica napus
C08p51030 Brassica napus
CAN.G19.15 Capsicum annuum
CAN.G251.9 Capsicum annuum
CAN.G881.2 Capsicum annuum
CANSAT01G3025 Cannabis sativa
CANSAT78G1218 Cannabis sativa
CARHR003610 Cardamine hirsuta
CARHR006430 Cardamine hirsuta
CARHR124110 Cardamine hirsuta
Carub.0001s0347 Capsella rubella
Carub.0001s0607 Capsella rubella
Carub.0004s1178 Capsella rubella
Ca_08655_v3 Cicer arietinum L.
Ca_09703_v3 Cicer arietinum L.
Ca_09835_v3 Cicer arietinum L.
Cc01_g18690 Coffea canephora
Cc03_g04850 Coffea canephora
CDE02G4469 Ceratophyllum demersum
CDE06G1295 Ceratophyllum demersum
CDE07G1084 Ceratophyllum demersum
Ciclev10004749m.g Citrus clementina
Ciclev10019720m.g Citrus clementina
CiPaw.01G190400 Carya illinoinensis
CiPaw.02G116400 Carya illinoinensis
CiPaw.04G183300 Carya illinoinensis
ClCG05G004610 Citrullus lanatus
ClCG06G006740 Citrullus lanatus
ClCG11G003690 Citrullus lanatus
COL.COLO4_08276 Corchorus olitorius
COL.COLO4_15789 Corchorus olitorius
Cpa.g.c44815 Carica papaya
Cpa.g.sc58.47 Carica papaya
CsaV3_2G013030 Cucumis sativus L.
CsaV3_2G015620 Cucumis sativus L.
CsaV3_3G012590 Cucumis sativus L.
CSS0008310 Camellia sinensis var. sinensis
CSS0017147 Camellia sinensis var. sinensis
CSS0029117 Camellia sinensis var. sinensis
CSS0046516 Camellia sinensis var. sinensis
CSS0050307 Camellia sinensis var. sinensis
DCAR_005871 Daucus carota
DCAR_007342 Daucus carota
DCAR_030718 Daucus carota
Dinv22461 Davidia involucrata
Dinv29912 Davidia involucrata
Dinv34582 Davidia involucrata
Duzib133G0907 Durio zibethinus
Duzib138G0491 Durio zibethinus
Duzib151G0812 Durio zibethinus
Duzib211G0077 Durio zibethinus
Duzib212G0472 Durio zibethinus
ECA240G1129 Erigeron canadensis
ECA247G0623 Erigeron canadensis
EL10Ac5g10451 Beta vulgaris
EL10Ac5g10894 Beta vulgaris
Eucgr.H00192 Eucalyptus grandis
Eucgr.H00193 Eucalyptus grandis
Eucgr.K03301 Eucalyptus grandis
FAN12G0435 Fragaria x ananassa
FAN15G2071 Fragaria x ananassa
FAN17G3065 Fragaria x ananassa
FAN20G0354 Fragaria x ananassa
FAN24G2343 Fragaria x ananassa
FAN27G2362 Fragaria x ananassa
FvH4_2g22270 Fragaria vesca
FvH4_4g02640 Fragaria vesca
Glyma.02G140600 Glycine max
Glyma.03G159900 Glycine max
Glyma.10G033500 Glycine max
Glyma.10G185200 Glycine max
Glyma.19G161900 Glycine max
Glyma.20G205100 Glycine max
Glyma.20G205200 Glycine max
Gohir.A07G210200 Gossypium hirsutum
Gohir.A08G061100 Gossypium hirsutum
Gohir.A09G223100 Gossypium hirsutum
Gohir.A10G113900 Gossypium hirsutum
Gohir.D07G216200 Gossypium hirsutum
Gohir.D08G070400 Gossypium hirsutum
Gohir.D09G225100 Gossypium hirsutum
Gohir.D10G153200 Gossypium hirsutum
Gorai.004G074100 Gossypium raimondii
Gorai.006G246600 Gossypium raimondii
Gorai.011G171100 Gossypium raimondii
Gorai.013G104300 Gossypium raimondii
GSVIVG01000756001 Vitis vinifera
GSVIVG01018116001 Vitis vinifera
GSVIVG01018118001 Vitis vinifera
HanXRQChr03g0092431 Helianthus annuus
HanXRQChr04g0113681 Helianthus annuus
HanXRQChr10g0281371 Helianthus annuus
HanXRQChr13g0424521 Helianthus annuus
HanXRQChr13g0424531 Helianthus annuus
Haze_11298 Corylus avellana
Haze_24550 Corylus avellana
Hma1.2p1_0650F.1_g195410 Hydrangea macrophylla
HPP92_006508 Vanilla planifolia
Hund02688 Selenicereus undatus
Hund09380 Selenicereus undatus
Hund09381 Selenicereus undatus
Lalb_Chr06g0162591 Lupinus albus
Lalb_Chr06g0162601 Lupinus albus
Lalb_Chr06g0169321 Lupinus albus
Lalb_Chr21g0306241 Lupinus albus
Lalb_Chr25g0290051 Lupinus albus
Lalb_Chr25g0290061 Lupinus albus
Lalb_Chr25g0290071 Lupinus albus
Lj1g0003876 Lotus japonicus
Lj2C1156G12 Lonicera japonica
Lj3C780G2 Lonicera japonica
Lj3C793G9 Lonicera japonica
Lj5g0021252 Lotus japonicus
Lj5g0021484 Lotus japonicus
Lsat_1_v5_gn_3_125500 Lactuca sativa
Lsat_1_v5_gn_8_91560 Lactuca sativa
Lsat_1_v5_gn_9_9640 Lactuca sativa
Manes.01G200600 Manihot esculenta
Manes.03G168900 Manihot esculenta
Manes.05G086200 Manihot esculenta
Manes.15G036900 Manihot esculenta
Mapoly0142s0012 Marchantia polymorpha
MD05G1203900 Malus domestica
MD10G1191100 Malus domestica
MD13G1207100 Malus domestica
Medtr1g070385 Medicago truncatula
Medtr1g075200 Medicago truncatula
Medtr1g075250 Medicago truncatula
Medtr1g075260 Medicago truncatula
Medtr1g475250 Medicago truncatula
Medtr7g096300 Medicago truncatula
MELO3C006470.2 Cucumis melo
MELO3C020772.2 Cucumis melo
MELO3C026781.2 Cucumis melo
Migut.D00390 Erythranthe guttata
Migut.G00436 Erythranthe guttata
MSTRG.4099 Avicennia marina
Nitab4.5_0000165g0010 Nicotiana tabacum
Nitab4.5_0000209g0180 Nicotiana tabacum
Nitab4.5_0001597g0020 Nicotiana tabacum
Nitab4.5_0001878g0060 Nicotiana tabacum
Nitab4.5_0005507g0010 Nicotiana tabacum
Nitab4.5_0010580g0020 Nicotiana tabacum
Nn1g02608 Nelumbo nucifera
Nn3g19535 Nelumbo nucifera
Oeu008792.1 Olea europaea
Oeu049791.1 Olea europaea
Os01g0774500 Oryza sativa ssp. japonica
Os03g0628800 Oryza sativa ssp. japonica
Os05g0508800 Oryza sativa ssp. japonica
Peaxi162Scf00578g00317 Petunia axillaris
Peaxi162Scf00785g00114 Petunia axillaris
PGR031G2474 Punica granatum
PGR044G0423 Punica granatum
PGSC0003DMG400016319 Solanum tuberosum
PGSC0003DMG400018074 Solanum tuberosum
Phvul.001G157700 Phaseolus vulgaris
Phvul.007G126000 Phaseolus vulgaris
Phvul.007G126100 Phaseolus vulgaris
Phvul.007G178200 Phaseolus vulgaris
Potri.002G043000 Populus trichocarpa
Potri.005G220000 Populus trichocarpa
Potri.008G162000 Populus trichocarpa
Potri.008G162400 Populus trichocarpa
Pp3c2_3490 Physcomitrium patens
Prupe.1G030700 Prunus persica
Prupe.8G230300 Prunus persica
Psat3g059600 Pisum sativum
Psat6g056440 Pisum sativum
Psat6g134120 Pisum sativum
Psat6g134160 Pisum sativum
PSO063G6097 Papaver somniferum
PSO170G2499 Papaver somniferum
PSO210G5058 Papaver somniferum
PSO585G0031 Papaver somniferum
PSO832G4288 Papaver somniferum
QL04p081380 Quercus lobata
QL06p015650 Quercus lobata
QL06p015686 Quercus lobata
QL12p042927 Quercus lobata
QL93p1863_0035 Quercus lobata
RcHm_v2.0_Chr4g0390371 Rosa chinensis
RcHm_v2.0_Chr4g0390381 Rosa chinensis
RcHm_v2.0_Chr4g0390501 Rosa chinensis
RcHm_v2.0_Chr6g0289231 Rosa chinensis
Rhsim04G0190400 Rhododendron simsii
Rhsim04G0190500 Rhododendron simsii
Rhsim13G0031400 Rhododendron simsii
Sabra02G0034800 Salix brachista
Sabra05G0168800 Salix brachista
Sabra08G0123700 Salix brachista
SalBow2G1403 Salvia bowleyana
SalBow4G0074 Salvia bowleyana
SalBow4G2635 Salvia bowleyana
Sc05g0000870 Simmondsia chinensis
Sc13g0005030 Simmondsia chinensis
Sed0009355 Sechium edule
Sed0011972 Sechium edule
Sed0021750 Sechium edule
Sed0026279 Sechium edule
SEGI_05312 Sequoiadendron giganteum
SEGI_10112 Sequoiadendron giganteum
SEGI_15835 Sequoiadendron giganteum
SEGI_30386 Sequoiadendron giganteum
SEGI_34122 Sequoiadendron giganteum
SEGI_35063 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00573 Striga asiatica
SGA_v2.0_scaffold88G27283 Striga asiatica
SHI09937 Sapria himalayana
SMO119G0302 Selaginella moellendorffii
SMO367G1151 Selaginella moellendorffii
Solyc06g031670.3 Solanum lycopersicum
Solyc06g053810.3 Solanum lycopersicum
Solyc08g059740.1 Solanum lycopersicum
Solyc08g059750.3 Solanum lycopersicum
Sopen06g010200 Solanum pennellii
Sopen06g018930 Solanum pennellii
Sopen08g009460 Solanum pennellii
Sp1g03090 Schrenkiella parvula
Sp1g05480 Schrenkiella parvula
Sp4g13170 Schrenkiella parvula
TAR633G1729 Trochodendron aralioides
TAR633G1864 Trochodendron aralioides
TAR636G0221 Trochodendron aralioides
TAR636G0314 Trochodendron aralioides
THA.LOC104800805 Tarenaya hassleriana
THA.LOC104801096 Tarenaya hassleriana
Thecc.01G265300 Theobroma cacao
Thecc.04G246000 Theobroma cacao
Thhalv10007316m.g Eutrema salsugineum
Thhalv10009309m.g Eutrema salsugineum
Thhalv10016515m.g Eutrema salsugineum
Thhalv10029242m.g Eutrema salsugineum
TPR.G20589 Trifolium pratense
TPR.G28889 Trifolium pratense
TPR.G28899 Trifolium pratense
TPR.G5713 Trifolium pratense
TPR.G9046 Trifolium pratense
TPR.G9061 Trifolium pratense
TWI73G0185 Tripterygium wilfordii
unitig_747.g21660 Utricularia gibba
unitig_748.g7315 Utricularia gibba
unitig_85.g27262 Utricularia gibba
vmacro02632 Vaccinium macrocarpon
vmacro08411 Vaccinium macrocarpon
VMungo0720G1204 Vigna mungo
VMungo0720G1918 Vigna mungo
VMungo0720G2961 Vigna mungo
VMungo1383G2411 Vigna mungo
Zm00001eb051130 Zea mays
Zm00001eb151740 Zea mays
Zm00001eb292360 Zea mays

User provided reference genes

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