Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07210 Brassica napus
A04p04560 Brassica napus
A07p22460 Brassica napus
A09p48300 Brassica napus
A10p16500 Brassica napus
Aa31sc23G300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3295 Anthoceros agrestis
Actinidia02957 Actinidia chinensis
Actinidia07726 Actinidia chinensis
Actinidia13871 Actinidia chinensis
Actinidia29220 Actinidia chinensis
Ah.08g219190 Amaranthus hybridus
AL5G25290 Arabidopsis lyrata
AL5G36520 Arabidopsis lyrata
AL8G35730 Arabidopsis lyrata
Aqoxy2G01540 Aquilegia oxysepala
Aqoxy2G02061 Aquilegia oxysepala
Aqoxy4G02963 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.80YXZJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VSYT7Q Arachis hypogaea
AT3G46460 Arabidopsis thaliana
AT3G55380 Arabidopsis thaliana
AT5G59300 Arabidopsis thaliana
ATR0559G136 Amborella trichopoda
ATR0693G422 Amborella trichopoda
Atru.chr12.493 Acer truncatum
Atru.chr3.3847 Acer truncatum
AUR62001813 Chenopodium quinoa
AUR62001814 Chenopodium quinoa
AUR62009599 Chenopodium quinoa
AUR62009600 Chenopodium quinoa
BcaB01g00106 Brassica carinata
BcaB02g07692 Brassica carinata
BcaB02g08426 Brassica carinata
BcaB05g22497 Brassica carinata
BcaB08g36268 Brassica carinata
BcaC02g09751 Brassica carinata
BcaC03g14021 Brassica carinata
BcaC04g19795 Brassica carinata
BcaC07g39856 Brassica carinata
BcaC08g44732 Brassica carinata
BolC2t07359H Brassica oleracea
BolC4t25266H Brassica oleracea
BolC6t37461H Brassica oleracea
BolC8t50676H Brassica oleracea
BolC9t58017H Brassica oleracea
BraA02t05800Z Brassica rapa
BraA04t16167Z Brassica rapa
BraA07t29922Z Brassica rapa
BraA09t40283Z Brassica rapa
BraA10t43733Z Brassica rapa
C02p12590 Brassica napus
C04p37000 Brassica napus
C06p22660 Brassica napus
C08p30600 Brassica napus
C09p51580 Brassica napus
CAN.G1013.10 Capsicum annuum
CAN.G786.19 Capsicum annuum
CANSAT54G2556 Cannabis sativa
CANSAT56G2553 Cannabis sativa
CARHR155370 Cardamine hirsuta
CARHR165390 Cardamine hirsuta
CARHR285640 Cardamine hirsuta
Carub.0005s1226 Capsella rubella
Carub.0005s2209 Capsella rubella
Carub.0008s1996 Capsella rubella
Ca_01334_v3 Cicer arietinum L.
Ca_19179_v3 Cicer arietinum L.
CBR_g21216 Chara braunii
Cc01_g12630 Coffea canephora
Cc02_g08050 Coffea canephora
CDE02G0282 Ceratophyllum demersum
CDE09G1154 Ceratophyllum demersum
Cfa001497 Carpinus fangiana
Cfa023725 Carpinus fangiana
Ciclev10029409m.g Citrus clementina
Ciclev10032916m.g Citrus clementina
CiPaw.13G096900 Carya illinoinensis
CiPaw.14G070400 Carya illinoinensis
ClCG03G001670 Citrullus lanatus
COL.COLO4_14984 Corchorus olitorius
COL.COLO4_18480 Corchorus olitorius
Cpa.g.sc1.390 Carica papaya
Cpa.g.sc190.5 Carica papaya
Cre12.g546650 Chlamydomonas reinhardtii
CsaV3_1G033990 Cucumis sativus L.
CSS0003207 Camellia sinensis var. sinensis
CSS0015358 Camellia sinensis var. sinensis
CSS0023719 Camellia sinensis var. sinensis
CSS0044488 Camellia sinensis var. sinensis
CSS0049145 Camellia sinensis var. sinensis
DCAR_015179 Daucus carota
DCAR_019169 Daucus carota
DCAR_019170 Daucus carota
Dinv03612 Davidia involucrata
Dinv25998 Davidia involucrata
Dinv31443 Davidia involucrata
Dinv32874 Davidia involucrata
Dinv37189 Davidia involucrata
Duzib150G0428 Durio zibethinus
Duzib168G1300 Durio zibethinus
Duzib170G0375 Durio zibethinus
ECA232G1555 Erigeron canadensis
ECA233G1558 Erigeron canadensis
EL10Ac7g15988 Beta vulgaris
EL10Ac7g15989 Beta vulgaris
Eucgr.J00031 Eucalyptus grandis
Eucgr.J00032 Eucalyptus grandis
FAN01G2347 Fragaria x ananassa
FAN01G3005 Fragaria x ananassa
FAN03G1545 Fragaria x ananassa
FAN06G0294 Fragaria x ananassa
FAN06G3997 Fragaria x ananassa
FAN09G4059 Fragaria x ananassa
FAN10G0500 Fragaria x ananassa
FAN11G2389 Fragaria x ananassa
FAN14G0835 Fragaria x ananassa
FAN16G0006 Fragaria x ananassa
FAN21G3645 Fragaria x ananassa
FAN25G1960 Fragaria x ananassa
FvH4_2g07130 Fragaria vesca
FvH4_2g11880 Fragaria vesca
FvH4_3g35650 Fragaria vesca
FvH4_7g22080 Fragaria vesca
Glyma.11G140900 Glycine max
Glyma.12G064400 Glycine max
Glyma.13G334800 Glycine max
Glyma.15G039700 Glycine max
Gohir.A03G040300 Gossypium hirsutum
Gohir.A05G097000 Gossypium hirsutum
Gohir.A07G096500 Gossypium hirsutum
Gohir.A13G227900 Gossypium hirsutum
Gohir.D03G127700 Gossypium hirsutum
Gohir.D05G097200 Gossypium hirsutum
Gohir.D07G100900 Gossypium hirsutum
Gohir.D13G233500 Gossypium hirsutum
Gorai.001G108800 Gossypium raimondii
Gorai.003G134400 Gossypium raimondii
Gorai.009G100700 Gossypium raimondii
Gorai.013G264300 Gossypium raimondii
GSVIVG01016569001 Vitis vinifera
GSVIVG01024998001 Vitis vinifera
GSVIVG01034196001 Vitis vinifera
HanXRQChr08g0220481 Helianthus annuus
HanXRQChr12g0370031 Helianthus annuus
HanXRQChr12g0370041 Helianthus annuus
Haze_17045 Corylus avellana
Haze_24062 Corylus avellana
Haze_26327 Corylus avellana
Haze_27188 Corylus avellana
Hma1.2p1_0035F.1_g022210 Hydrangea macrophylla
Hma1.2p1_0683F.1_g202910 Hydrangea macrophylla
Hma1.2p1_1263F.1_g271250 Hydrangea macrophylla
Hma1.2p1_1982F.1_g309980 Hydrangea macrophylla
HPP92_015399 Vanilla planifolia
HPP92_018119 Vanilla planifolia
HPP92_018151 Vanilla planifolia
HPP92_019825 Vanilla planifolia
HPP92_026997 Vanilla planifolia
Hund04981 Selenicereus undatus
Hund04982 Selenicereus undatus
Hund18923 Selenicereus undatus
Lalb_Chr01g0003731 Lupinus albus
Lalb_Chr14g0375051 Lupinus albus
Lalb_Chr19g0137761 Lupinus albus
Lj1A156G60 Lonicera japonica
Lj2A4G21 Lonicera japonica
Lj2A97G46 Lonicera japonica
Lj3g0012764 Lotus japonicus
Lj3g0018652 Lotus japonicus
Lj8C85G3 Lonicera japonica
Lsat_1_v5_gn_2_116621 Lactuca sativa
Lsat_1_v5_gn_8_16180 Lactuca sativa
Lsat_1_v5_gn_9_65361 Lactuca sativa
Manes.04G033200 Manihot esculenta
Manes.07G113900 Manihot esculenta
Manes.10G032100 Manihot esculenta
Manes.11G132200 Manihot esculenta
Mapoly0115s0013 Marchantia polymorpha
MBI05_g06544_MAGBIO Magnolia biondii
MBI14_g11687_MAGBIO Magnolia biondii
MCO03G512 Micromonas commoda
MD00G1137800 Malus domestica
MD01G1125800 Malus domestica
MD02G1182900 Malus domestica
MD07G1195500 Malus domestica
MD10G1023400 Malus domestica
MD11G1144800 Malus domestica
Medtr2g096690 Medicago truncatula
Medtr4g063490 Medicago truncatula
MELO3C020654.2 Cucumis melo
MELO3C026720.2 Cucumis melo
MELO3C030622.2 Cucumis melo
Migut.F01511 Erythranthe guttata
MSTRG.304 Avicennia marina
MSTRG.8241 Avicennia marina
Nitab4.5_0000794g0090 Nicotiana tabacum
Nitab4.5_0001831g0060 Nicotiana tabacum
Nitab4.5_0003969g0030 Nicotiana tabacum
Nitab4.5_0005525g0030 Nicotiana tabacum
Nitab4.5_0006262g0020 Nicotiana tabacum
Nitab4.5_0009916g0010 Nicotiana tabacum
Nn2g10409 Nelumbo nucifera
Nn2g12797 Nelumbo nucifera
Nn3g18481 Nelumbo nucifera
Oeu009480.1 Olea europaea
Oeu014523.1 Olea europaea
Oeu014524.1 Olea europaea
Oeu039374.1 Olea europaea
Oeu057065.1 Olea europaea
Os01g0839700 Oryza sativa ssp. japonica
Os05g0460200 Oryza sativa ssp. japonica
Peaxi162Scf00015g00147 Petunia axillaris
Peaxi162Scf00015g00148 Petunia axillaris
Peaxi162Scf00036g00016 Petunia axillaris
Peaxi162Scf00760g00129 Petunia axillaris
PGR044G2658 Punica granatum
PGR119G0206 Punica granatum
PGSC0003DMG400008958 Solanum tuberosum
PGSC0003DMG400027733 Solanum tuberosum
PGSC0003DMG401023527 Solanum tuberosum
PGSC0003DMG402023527 Solanum tuberosum
Phvul.011G065400 Phaseolus vulgaris
Phvul.L004343 Phaseolus vulgaris
Potri.008G053800 Populus trichocarpa
Potri.008G053900 Populus trichocarpa
Potri.010G206766 Populus trichocarpa
Potri.010G206832 Populus trichocarpa
Pp3c1_29770 Physcomitrium patens
Pp3c1_30730 Physcomitrium patens
Pp3c2_6600 Physcomitrium patens
Pp3c7_12130 Physcomitrium patens
PRCOL_00001951 Prasinoderma coloniale
Prupe.2G232800 Prunus persica
Prupe.6G080700 Prunus persica
Psat0s137g0040 Pisum sativum
Psat5g282760 Pisum sativum
Psat6g235880 Pisum sativum
Psat7g217640 Pisum sativum
PSO063G1065 Papaver somniferum
PSO063G4964 Papaver somniferum
PSO339G3155 Papaver somniferum
PSO339G4926 Papaver somniferum
PSO384G0860 Papaver somniferum
PSO421G0025 Papaver somniferum
PSO421G0134 Papaver somniferum
PSO421G0153 Papaver somniferum
PSO421G0286 Papaver somniferum
PSO648G0117 Papaver somniferum
QL01p032731 Quercus lobata
QL08p059139 Quercus lobata
RcHm_v2.0_Chr1g0366471 Rosa chinensis
RcHm_v2.0_Chr5g0063821 Rosa chinensis
Rhsim03G0131800 Rhododendron simsii
Rhsim09G0165200 Rhododendron simsii
Rhsim12G0050800 Rhododendron simsii
Rhsim12G0051200 Rhododendron simsii
Sabra10G0159700 Salix brachista
SalBow6G4358 Salvia bowleyana
Sc06g0002630 Simmondsia chinensis
Sc06g0008280 Simmondsia chinensis
Sed0020365 Sechium edule
Sed0025252 Sechium edule
SEGI_15748 Sequoiadendron giganteum
SEGI_37709 Sequoiadendron giganteum
SGA_v2.0_scaffold108G31009 Striga asiatica
SGA_v2.0_scaffold2G00994 Striga asiatica
SHI05956 Sapria himalayana
SMO367G0028 Selaginella moellendorffii
Solyc04g011430.3 Solanum lycopersicum
Solyc05g054540.4 Solanum lycopersicum
Solyc05g054545.1 Solanum lycopersicum
Solyc09g009720.2 Solanum lycopersicum
Sopen04g005610 Solanum pennellii
Sopen05g033020 Solanum pennellii
Sopen05g033030 Solanum pennellii
Sopen09g004500 Solanum pennellii
Sp5g07090 Schrenkiella parvula
Sp5g15220 Schrenkiella parvula
Sp6g20970 Schrenkiella parvula
TAR623G1577 Trochodendron aralioides
TAR633G2557 Trochodendron aralioides
TAR636G2866 Trochodendron aralioides
THA.LOC104799447 Tarenaya hassleriana
THA.LOC104810022 Tarenaya hassleriana
THA.LOC104810789 Tarenaya hassleriana
THA.LOC104814875 Tarenaya hassleriana
Thecc.09G324800 Theobroma cacao
Thecc.10G045000 Theobroma cacao
Thhalv10002692m.g Eutrema salsugineum
Thhalv10010846m.g Eutrema salsugineum
Thhalv10014863m.g Eutrema salsugineum
TPR.G14469 Trifolium pratense
TPR.G34277 Trifolium pratense
TPR.G34292 Trifolium pratense
TWI15G0609 Tripterygium wilfordii
TWI31G1409 Tripterygium wilfordii
TWI75G1006 Tripterygium wilfordii
TWI79G0086 Tripterygium wilfordii
vmacro01794 Vaccinium macrocarpon
vmacro07165 Vaccinium macrocarpon
VMungo1080G1704 Vigna mungo
VMungo1127G0330 Vigna mungo
Zm00001eb148520 Zea mays
Zm00001eb289700 Zea mays
Zm00001eb351380 Zea mays
Zm00001eb368010 Zea mays

User provided reference genes

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