Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p01690 Brassica napus
Aa31LG8G16040 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4940 Anthoceros agrestis
Actinidia38490 Actinidia chinensis
AL3G52980 Arabidopsis lyrata
Aqoxy1G03617 Aquilegia oxysepala
Aqoxy1G04058 Aquilegia oxysepala
Aqoxy1G04137 Aquilegia oxysepala
Aqoxy1G04223 Aquilegia oxysepala
Aqoxy7G02463 Aquilegia oxysepala
Aqoxy7G02968 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.03FAT9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1FH2KY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1SRP2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.20M4XD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3UY7BA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3ZXE65 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.79IGHD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7P296F Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8138Y0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.91R7WG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ATBT2Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C5XBA2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DKIQ11 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E8I1B0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F06MSU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FRUA2D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GE5ZL0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HVC26U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I8T1HA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JEGI56 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JHMF4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L89M35 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N49RRM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RG9KNZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SIZM0A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UA2EE1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VAKV0G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W80L0M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WB2JVN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XBG8XU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XIDV9V Arachis hypogaea
AT2G18950 Arabidopsis thaliana
ATR0580G106 Amborella trichopoda
ATR0629G136 Amborella trichopoda
Atru.chr7.2512 Acer truncatum
Atru.chr7.850 Acer truncatum
AUR62012455 Chenopodium quinoa
AUR62018132 Chenopodium quinoa
AUR62021320 Chenopodium quinoa
AUR62031579 Chenopodium quinoa
AUR62033237 Chenopodium quinoa
AUR62044427 Chenopodium quinoa
BcaB03g16688 Brassica carinata
BcaB07g31633 Brassica carinata
BcaC06g36503 Brassica carinata
BolC9t54338H Brassica oleracea
BraA07t27971Z Brassica rapa
BraA09t36857Z Brassica rapa
C07p03550 Brassica napus
C09p14350 Brassica napus
CAN.G33.20 Capsicum annuum
CANSAT11G1615 Cannabis sativa
CANSAT35G0104 Cannabis sativa
CARHR109490 Cardamine hirsuta
Carub.0003s3318 Capsella rubella
Ca_21238_v3 Cicer arietinum L.
Cc06_g13050 Coffea canephora
CDE02G0793 Ceratophyllum demersum
CDE04G2533 Ceratophyllum demersum
Cfa013091 Carpinus fangiana
Cfa013403 Carpinus fangiana
Ciclev10001398m.g Citrus clementina
Ciclev10003300m.g Citrus clementina
Ciclev10004028m.g Citrus clementina
Ciclev10005871m.g Citrus clementina
Ciclev10006111m.g Citrus clementina
Ciclev10008336m.g Citrus clementina
Ciclev10008442m.g Citrus clementina
Ciclev10008503m.g Citrus clementina
Ciclev10008872m.g Citrus clementina
Ciclev10009274m.g Citrus clementina
Ciclev10010224m.g Citrus clementina
Ciclev10010546m.g Citrus clementina
Ciclev10010573m.g Citrus clementina
Ciclev10010789m.g Citrus clementina
Ciclev10017775m.g Citrus clementina
Ciclev10018121m.g Citrus clementina
Ciclev10027291m.g Citrus clementina
Ciclev10027365m.g Citrus clementina
Ciclev10027371m.g Citrus clementina
Ciclev10031740m.g Citrus clementina
Ciclev10032730m.g Citrus clementina
Ciclev10033551m.g Citrus clementina
CiPaw.07G193900 Carya illinoinensis
CiPaw.08G034900 Carya illinoinensis
ClCG11G012020 Citrullus lanatus
Cpa.g.sc532.5 Carica papaya
Cpa.g.sc95.41 Carica papaya
Cre09.g414000 Chlamydomonas reinhardtii
CsaV3_2G008500 Cucumis sativus L.
CSS0003192 Camellia sinensis var. sinensis
CSS0035112 Camellia sinensis var. sinensis
CSS0039178 Camellia sinensis var. sinensis
CSS0040319 Camellia sinensis var. sinensis
CSS0041637 Camellia sinensis var. sinensis
CSS0043013 Camellia sinensis var. sinensis
DCAR_004882 Daucus carota
DCAR_004883 Daucus carota
DCAR_007687 Daucus carota
DCAR_017980 Daucus carota
DCAR_022795 Daucus carota
DCAR_027831 Daucus carota
DCAR_027833 Daucus carota
DCAR_027835 Daucus carota
DCAR_027838 Daucus carota
DCAR_027843 Daucus carota
DCAR_027845 Daucus carota
Dinv16500 Davidia involucrata
Dinv19556 Davidia involucrata
Dinv41221 Davidia involucrata
Duzib168G2033 Durio zibethinus
ECA234G1664 Erigeron canadensis
ECA240G3445 Erigeron canadensis
ECA247G3192 Erigeron canadensis
EL10Ac2g04143 Beta vulgaris
EL10Ac8g18305 Beta vulgaris
Eucgr.C02385 Eucalyptus grandis
FAN07G0946 Fragaria x ananassa
FAN12G2509 Fragaria x ananassa
FAN15G0567 Fragaria x ananassa
FAN17G2282 Fragaria x ananassa
FAN22G1277 Fragaria x ananassa
FvH4_2g40790 Fragaria vesca
FvH4_4g07870 Fragaria vesca
Glyma.01G134600 Glycine max
Glyma.03G033100 Glycine max
Glyma.08G274800 Glycine max
Glyma.10G070100 Glycine max
Glyma.10G070200 Glycine max
Glyma.10G070300 Glycine max
Glyma.10G295300 Glycine max
Glyma.13G097800 Glycine max
Glyma.13G152746 Glycine max
Glyma.13G152780 Glycine max
Glyma.13G152814 Glycine max
Glyma.17G061900 Glycine max
Glyma.20G245100 Glycine max
Gohir.A13G212200 Gossypium hirsutum
Gohir.D13G216300 Gossypium hirsutum
Gorai.013G246600 Gossypium raimondii
GSVIVG01029247001 Vitis vinifera
GSVIVG01035912001 Vitis vinifera
HanXRQChr09g0244481 Helianthus annuus
HanXRQChr09g0244501 Helianthus annuus
HanXRQChr10g0308511 Helianthus annuus
HanXRQChr10g0308761 Helianthus annuus
HanXRQChr10g0308771 Helianthus annuus
HanXRQChr10g0309171 Helianthus annuus
HanXRQChr10g0309181 Helianthus annuus
HanXRQChr12g0358341 Helianthus annuus
HanXRQChr13g0405231 Helianthus annuus
HanXRQChr13g0405241 Helianthus annuus
HanXRQChr13g0405261 Helianthus annuus
Haze_21448 Corylus avellana
Haze_21944 Corylus avellana
Hma1.2p1_1086F.1_g255435 Hydrangea macrophylla
HPP92_008842 Vanilla planifolia
HPP92_008869 Vanilla planifolia
HPP92_012305 Vanilla planifolia
HPP92_012306 Vanilla planifolia
HPP92_012308 Vanilla planifolia
HPP92_023086 Vanilla planifolia
Hund26326 Selenicereus undatus
Lalb_Chr04g0247811 Lupinus albus
Lalb_Chr04g0247831 Lupinus albus
Lalb_Chr04g0257501 Lupinus albus
Lalb_Chr13g0300131 Lupinus albus
Lalb_Chr15g0084011 Lupinus albus
Lalb_Chr18g0052341 Lupinus albus
Lalb_Chr18g0052351 Lupinus albus
Lalb_Chr18g0052361 Lupinus albus
Lalb_Chr18g0052391 Lupinus albus
Lalb_Chr19g0129921 Lupinus albus
Lj4g0014034 Lotus japonicus
Lj6g0022061 Lotus japonicus
LjContig00141g0006611 Lotus japonicus
LjContig00141g0012900 Lotus japonicus
LjContig00141g0015049 Lotus japonicus
LjContig00141g0016123 Lotus japonicus
LjContig00141g0016846 Lotus japonicus
LjContig00310g0010616 Lotus japonicus
LjContig00310g0022500 Lotus japonicus
Lju50A8G4 Lonicera japonica
Lsat_1_v5_gn_4_153780 Lactuca sativa
Lsat_1_v5_gn_5_100341 Lactuca sativa
Lsat_1_v5_gn_5_82700 Lactuca sativa
Lsat_1_v5_gn_5_82740 Lactuca sativa
Lsat_1_v5_gn_5_82780 Lactuca sativa
Lsat_1_v5_gn_5_85220 Lactuca sativa
Lsat_1_v5_gn_7_53641 Lactuca sativa
Manes.06G022400 Manihot esculenta
Manes.16G126800 Manihot esculenta
Mapoly0042s0068 Marchantia polymorpha
MBI14_g15619_MAGBIO Magnolia biondii
MBI14_g37265_MAGBIO Magnolia biondii
MBI14_g45177_MAGBIO Magnolia biondii
MBI15_g38769_MAGBIO Magnolia biondii
MCO15G128 Micromonas commoda
MD08G1060100 Malus domestica
MD13G1248300 Malus domestica
MD16G1255400 Malus domestica
Medtr4g127800 Medicago truncatula
MELO3C004006.2 Cucumis melo
Migut.K00231 Erythranthe guttata
MSTRG.19717 Avicennia marina
MSTRG.26215 Avicennia marina
Nitab4.5_0000055g0180 Nicotiana tabacum
Nitab4.5_0000486g0040 Nicotiana tabacum
Nitab4.5_0001869g0020 Nicotiana tabacum
Nitab4.5_0009538g0020 Nicotiana tabacum
Nn2g12274 Nelumbo nucifera
Nn8g40527 Nelumbo nucifera
Oeu002548.1 Olea europaea
Oeu056505.2 Olea europaea
Os06g0658900 Oryza sativa ssp. japonica
Peaxi162Scf00116g00312 Petunia axillaris
Peaxi162Scf01054g00033 Petunia axillaris
PGR031G0225 Punica granatum
PGR031G2020 Punica granatum
PGR031G3225 Punica granatum
PGR044G0048 Punica granatum
Phvul.003G143900 Phaseolus vulgaris
Phvul.007G227700 Phaseolus vulgaris
Phvul.007G227800 Phaseolus vulgaris
Phvul.007G227900 Phaseolus vulgaris
Phvul.007G228000 Phaseolus vulgaris
Phvul.007G228100 Phaseolus vulgaris
Phvul.007G228200 Phaseolus vulgaris
Phvul.007G228300 Phaseolus vulgaris
Phvul.007G228400 Phaseolus vulgaris
Phvul.007G228500 Phaseolus vulgaris
Phvul.010G008800 Phaseolus vulgaris
Potri.006G166100 Populus trichocarpa
Potri.018G022000 Populus trichocarpa
Potri.018G090700 Populus trichocarpa
Pp3c11_23340 Physcomitrium patens
Pp3c18_14840 Physcomitrium patens
Pp3c6_2930 Physcomitrium patens
Prupe.1G082500 Prunus persica
Prupe.1G390700 Prunus persica
Psat4g117280 Pisum sativum
Psat4g216000 Pisum sativum
PSO063G6647 Papaver somniferum
PSO170G0736 Papaver somniferum
PSO170G4677 Papaver somniferum
QL02p020029 Quercus lobata
QL02p098385 Quercus lobata
RcHm_v2.0_Chr4g0401151 Rosa chinensis
RcHm_v2.0_Chr6g0299791 Rosa chinensis
Rhsim02G0083900 Rhododendron simsii
Rhsim02G0206900 Rhododendron simsii
Rhsim02G0207000 Rhododendron simsii
Rhsim03G0265200 Rhododendron simsii
RhsimUnG0162800 Rhododendron simsii
RhsimUnG0162900 Rhododendron simsii
Sabra18G0077900 Salix brachista
SalBow1G1504 Salvia bowleyana
Sc14g0001320 Simmondsia chinensis
Sed0019185 Sechium edule
SEGI_01230 Sequoiadendron giganteum
SGA_v2.0_scaffold17G07940 Striga asiatica
SMO266G0035 Selaginella moellendorffii
Solyc07g017770.3 Solanum lycopersicum
Solyc08g041850.4 Solanum lycopersicum
Sopen07g006610 Solanum pennellii
Sopen08g012050 Solanum pennellii
Sp3g32400 Schrenkiella parvula
TAR625G1212 Trochodendron aralioides
TAR682G0004 Trochodendron aralioides
THA.LOC104819975 Tarenaya hassleriana
Thecc.09G174400 Theobroma cacao
Thhalv10022720m.g Eutrema salsugineum
TWI32G0246 Tripterygium wilfordii
TWI34G1785 Tripterygium wilfordii
unitig_21.g20651 Utricularia gibba
unitig_744.g24139 Utricularia gibba
vmacro06006 Vaccinium macrocarpon
vmacro11227 Vaccinium macrocarpon
vmacro11228 Vaccinium macrocarpon
VMungo0331G0531 Vigna mungo
VMungo0464G0724 Vigna mungo
VMungo0720G0021 Vigna mungo
VMungo0720G0071 Vigna mungo
VMungo0720G0120 Vigna mungo
VMungo0720G0174 Vigna mungo
VMungo0720G0175 Vigna mungo
VMungo0720G0196 Vigna mungo
VMungo0720G0277 Vigna mungo
VMungo0720G0804 Vigna mungo
VMungo0720G1400 Vigna mungo
VMungo0720G2997 Vigna mungo
VMungo0965G0002 Vigna mungo
VMungo1215G2898 Vigna mungo
VMungo1309G0052 Vigna mungo
VMungo1309G0198 Vigna mungo
Zm00001eb105110 Zea mays
Zm00001eb121230 Zea mays
Zm00001eb382300 Zea mays
Zm00001eb386720 Zea mays
Zm00001eb389370 Zea mays

User provided reference genes

Program Settings